LOCUS       XM_006244517            2776 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus kinesin light chain 4 (Klc4),
            transcript variant X2, mRNA.
ACCESSION   XM_006244517
VERSION     XM_006244517.4
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jul 31, 2024 this sequence was replaced by
            NM_001432594.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006244517.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2776
                     /gene="Klc4"
                     /gene_synonym="1200014p03rik; Knsl8"
                     /note="kinesin light chain 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 108 long SRA reads, 11 Proteins"
                     /db_xref="GeneID:316226"
                     /db_xref="RGD:1306555"
     CDS             516..2375
                     /gene="Klc4"
                     /gene_synonym="1200014p03rik; Knsl8"
                     /codon_start=1
                     /product="kinesin light chain 4 isoform X1"
                     /protein_id="XP_006244579.1"
                     /db_xref="GeneID:316226"
                     /db_xref="RGD:1306555"
                     /translation="MSGLVLGQRDEPAGHRLSQEEILGSTRLVSQGLESLHSEHQAVL
                     QSLSHTIECLQQGGHEEGLVHEKARQLRRSMENIELGLSEAQVMLALASHLSTVESEK
                     QKLRAQVRRLCQENQWLRDELAGTQQRLQRSEQAVAQLEEEKKHLEFLRQLRQYDEDG
                     HSMEEKEGDASKDSLDDLFPNEEEEDSSNDLSRGQGAAAAQQGGYEIPARLRTLHNLV
                     IQYAAQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLL
                     NDALSIRESTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTDHP
                     DVAKQLNNLALLCQNQGKYEAVERYYQRALAIYERQLGPDNPNVARTKNNLASCYLKQ
                     GKYSEAETLYKEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSRSRSRESGTPYAEYG
                     GWYKACRVSSPTVNTTLRNLGALYRRQGKLEAAETLEECALRSRKQGTDPISQTKVAE
                     LLGEGDGRKTMQEGPGDSVKFEGGEDASVAVEWSGDGSGTLQRSGSLGKIRDVLRRSS
                     ELLVRKLQGTEPRPSSSNMKRAASLNYLNQPNAAPLQTSRGLSASTVDLSSSS"
     polyA_site      2776
                     /gene="Klc4"
                     /gene_synonym="1200014p03rik; Knsl8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcttattccc acattctggg acaaatgagt aagtcacttc ctactaacca cacaaaactt
       61 cagactgact caaaaactcc gccccccgcg attcttcccc gcccctcggc gtccagacag
      121 acagtaggac aacctgcccc gccccctgtg ggaacccctg actccgtgac ctcgagcttg
      181 tccgctgtcg ggtcttggtc agcgactctg ccctcacttc caccttcctc tcccctcagc
      241 cctcgaagat cttacttctg tccttaccct cggctctcag ggcaagttag gacccttaga
      301 cactcctgat tgtaggcccc caggcttgga tagcctgcgc tcagcgcctt tctctatgac
      361 cccactgtgc acggcagatc tgctacgctt ccctggacca tccggcactt gagaggcaac
      421 ttaaggtgcc tgttagttgc aggtcagagt ttcttccggg ctctggcctg ggagccacct
      481 gaaaccaagg gcttctgctc tgtacacagc tgaggatgtc aggcctggta ttggggcagc
      541 gggatgagcc tgcagggcac cggctcagtc aagaggagat cttgggcagt accaggttgg
      601 tgagccaagg gctggagtcc ctacacagtg agcaccaggc tgtgctacag agcctgtccc
      661 acaccatcga gtgtctgcaa cagggaggcc atgaggaagg actggtgcat gagaaagccc
      721 ggcagctgcg acggtctatg gagaacattg agctgggact cagcgaggcc caggtgatgc
      781 tggctctggc tagccacctg agcacagtgg agtctgagaa gcagaagctg cgggcccaag
      841 tacggcggct ctgccaggag aatcagtggc tccgggacga gctggcgggc actcagcagc
      901 ggctgcagcg cagcgagcag gctgtagcac agctggagga agagaagaag cacctggagt
      961 tcttaaggca gctgcgccag tatgacgagg atgggcacag catggaggag aaggagggag
     1021 atgctagcaa agattccctg gatgacctct tccccaatga ggaggaggag gactccagca
     1081 acgacttgtc ccgtggtcag ggtgctgcag cggcccagca gggtggatat gagatcccag
     1141 caaggttgcg gaccctgcac aacctggtca tccagtatgc agctcagggt cgctatgagg
     1201 tggctgtgcc actctgcaag caagcgctag aggacctgga gcgcacatct ggccgaggtc
     1261 accctgacgt ggctactatg ctcaatatcc tggctttggt gtatcgggac cagaataaat
     1321 acaaggaggc tgctcatctg ctgaacgatg ccctcagcat ccgggagagc accctgggcc
     1381 gggaccaccc agccgtggct gccacgctca acaatctggc cgtgctgtat ggcaagcggg
     1441 gcaaatacaa ggaagcagag ccgctgtgcc agcgggcact ggagatccga gagaaggtct
     1501 tgggcaccga ccatccggat gtggcaaagc agctgaacaa cttggccctc ctatgtcaaa
     1561 accagggcaa gtacgaggcc gtggagcgct attatcagcg ggcactagct atctatgagc
     1621 gccagctagg gccggacaac cctaatgtag ctcggaccaa gaataacctg gcttcctgct
     1681 acctaaagca gggcaagtac tctgaggctg agactctgta taaagagatc ctgacccgtg
     1741 cccacgtgca ggagttcgga tctgtggatg atgaccacaa gcccatatgg atgcacgctg
     1801 aggagcggga ggagatgagc aggagccggt cccgtgagag cggcacgccc tatgcagagt
     1861 atggagggtg gtacaaggcc tgcagagtga gcagccccac ggtgaacacg acgctaagga
     1921 acctaggggc tctgtacagg cgccagggaa agctggaggc agctgagacc ctggaggagt
     1981 gtgccctgcg ctccaggaaa cagggtactg accccatcag tcagaccaag gtggccgagc
     2041 tgctggggga aggtgatggt agaaagacca tgcaggaggg ccctggagac agtgtgaagt
     2101 tcgagggagg tgaagatgcg tcagtggctg tggagtggtc aggggatggc agtggcaccc
     2161 tccagaggag tggctctctg ggcaagatcc gggatgtgct tcgtagaagc agtgagctcc
     2221 tggtgaggaa gctccaaggc actgagcctc ggccttccag cagcaacatg aagcgggcag
     2281 cctcactgaa ctacctgaac caacccaatg cagcccccct ccagacttcc cggggcctca
     2341 gtgccagcac cgtggacctt tcttcaagca gctgacattc aactccctct tccagtctgc
     2401 tgggtcccta caaccctcac agcattcccc atggctccag tctcttcccc acctcaatag
     2461 gatggtgaag agggagcagt tcaggtggag gagtgctgct tcaagggtct aggctccttc
     2521 cccaggaaac tccccccacc cccttcggaa gggccctcag gaaaatatgc tctctagagt
     2581 cctatagatt gaggctccca aggtggggga agtgggtatg cacctcaggg atgcgcctac
     2641 tgctggcttt tccgtcagtt tggggctggg gctggccagc tgagccgccc tgccctggcc
     2701 tctctcaccc ctgttgccac actttaggtc catgtatttc actgtttctg taataaacga
     2761 atcaggtaac accttg
//
