LOCUS       NM_138520               1782 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus kinesin light chain 3 (Klc3), mRNA.
ACCESSION   NM_138520 XM_006228380
VERSION     NM_138520.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Muresan,Z. and Muresan,V.
  TITLE     Coordinated transport of phosphorylated amyloid-beta precursor
            protein and c-Jun NH2-terminal kinase-interacting protein-1
  JOURNAL   J Cell Biol 171 (4), 615-625 (2005)
   PUBMED   16301330
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Yang,J. and Li,T.
  TITLE     The ciliary rootlet interacts with kinesin light chains and may
            provide a scaffold for kinesin-1 vesicular cargos
  JOURNAL   Exp Cell Res 309 (2), 379-389 (2005)
   PUBMED   16018997
REFERENCE   3  (bases 1 to 1782)
  AUTHORS   Zhang,Y., Oko,R. and van der Hoorn,F.A.
  TITLE     Rat kinesin light chain 3 associates with spermatid mitochondria
  JOURNAL   Dev Biol 275 (1), 23-33 (2004)
   PUBMED   15464570
  REMARK    GeneRIF: Can associate with mitochondria.
REFERENCE   4  (bases 1 to 1782)
  AUTHORS   Bhullar,B., Zhang,Y., Junco,A., Oko,R. and van der Hoorn,F.A.
  TITLE     Association of kinesin light chain with outer dense fibers in a
            microtubule-independent fashion
  JOURNAL   J Biol Chem 278 (18), 16159-16168 (2003)
   PUBMED   12594206
REFERENCE   5  (bases 1 to 1782)
  AUTHORS   Junco,A., Bhullar,B., Tarnasky,H.A. and van der Hoorn,F.A.
  TITLE     Kinesin light-chain KLC3 expression in testis is restricted to
            spermatids
  JOURNAL   Biol Reprod 64 (5), 1320-1330 (2001)
   PUBMED   11319135
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Dec 5, 2020 this sequence version replaced
            XM_006228380.3, NM_138520.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097284.1, SRR26643293.1724.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-29                JAXUCZ010000001.1  88183394-88183422   c
            30-295              JAXUCZ010000001.1  88178656-88178921   c
            296-526             JAXUCZ010000001.1  88177410-88177640   c
            527-596             JAXUCZ010000001.1  88176846-88176915   c
            597-816             JAXUCZ010000001.1  88176320-88176539   c
            817-904             JAXUCZ010000001.1  88175904-88175991   c
            905-1006            JAXUCZ010000001.1  88175705-88175806   c
            1007-1180           JAXUCZ010000001.1  88175206-88175379   c
            1181-1271           JAXUCZ010000001.1  88174804-88174894   c
            1272-1312           JAXUCZ010000001.1  88174681-88174721   c
            1313-1419           JAXUCZ010000001.1  88174491-88174597   c
            1420-1483           JAXUCZ010000001.1  88174302-88174365   c
            1484-1782           JAXUCZ010000001.1  88173842-88174140   c
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1782
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /note="kinesin light chain 3"
                     /db_xref="GeneID:171549"
                     /db_xref="RGD:621432"
     exon            1..29
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            30..295
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..1555
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /note="kinesin light chain KLCt"
                     /codon_start=1
                     /product="kinesin light chain 3"
                     /protein_id="NP_612529.2"
                     /db_xref="GeneID:171549"
                     /db_xref="RGD:621432"
                     /translation="MSVQVAAPGSTGLGPERLNPEELVRQTRQVVQGLEALRAEHHSL
                     AGHLAEALAGPGPVAGVELLEEKQQVVNHSLEAIELGLGEAQVLLALSAHVGVLEAEK
                     QRLRAQARRLAQENTWLREELEETQRRLRASEEAVAQLEEEKSHLQFLGQLRQYDPPE
                     ESQRPDSPPRRDSLASLFPSEEEEKKGPEAAGAAAAQQGGYEIPARLRTLHNLVIQYA
                     SQGRYEVAVPLCRQALEDLERSSGHCHPDVATMLNILALVYRDQNKYKEATELLHDAL
                     QIREQTLGPEHPAVAATLNNLAVLYGKRGRYREAEPLCQRALEIREKVLGADHPDVAK
                     QLNNLALLCQNQGKFQDVERHYARALSIYEALGGPQDPNVAKTKNNLASAYLKQNKYQ
                     QAEELYKEILSQEALPAPLGAPQGGTAGEAQQQVLRRSSSFSKLRESIRRGSEKLVSR
                     LRGESMAGAAGMKRAMSLNMLNVDGPRAARMQLSTQHLNEASRTLSASTQDLSPR"
     exon            296..526
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            527..596
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            597..816
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            817..904
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1006
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1180
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1181..1271
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1272..1312
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1419
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1420..1483
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
     exon            1484..1782
                     /gene="Klc3"
                     /gene_synonym="Klct"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgcagcctg agagtgcaag acgtgcatgg agcagccatg tctgtgcagg tggcagcccc
       61 tggaagcaca gggctgggcc cagaacgcct gaacccggag gagctggtgc ggcagacgcg
      121 acaggttgta cagggactgg aggccctgcg ggccgagcac catagtctgg ctgggcactt
      181 ggcggaggcc ctggctggac caggccctgt agcgggtgta gaactgctgg aagagaagca
      241 acaggtggtg aaccactccc tggaggccat tgagctggga ctgggtgagg cccaggtgct
      301 gctggccctg tctgcacacg tgggtgtgtt ggaggctgag aagcagaggc tacgggcaca
      361 ggcacggagg ctagcccaag agaacacatg gcttcgagag gagctggagg agacacagag
      421 gcgactgcgg gccagtgagg aggctgtggc ccagctggaa gaggagaaaa gccaccttca
      481 gttcctgggg cagctgaggc agtatgaccc gcccgaggag agccagaggc cggattcccc
      541 gcctcgccga gacagcctgg cttctctctt ccccagtgaa gaggaggaaa agaaaggtcc
      601 tgaggcagca ggagcagcag cagcgcagca gggtggctat gagatcccag ctcgtctgcg
      661 gactctgcac aacctggtga tccagtatgc tagccagggc cgctatgagg tggcagttcc
      721 gctgtgtcgc caggccttgg aggacctgga gcggagctca ggccactgcc accctgacgt
      781 ggccaccatg ctcaacatcc tggcacttgt gtacagggac cagaacaagt acaaggaggc
      841 cacggagctt cttcacgacg ccctgcagat ccgggaacag acgctgggtc ctgaacaccc
      901 tgcagtggcc gccaccctca acaacctggc agtcctttac ggaaaacgtg gccgttaccg
      961 ggaggcagaa cccctctgcc agcgtgctct ggagatccgt gagaaggtcc tgggtgctga
     1021 ccaccctgat gtggccaagc agctcaacaa cctggccctg ctgtgccaga accagggcaa
     1081 gtttcaggat gtggagcggc actatgcaag ggccctgagt atctacgagg ccctgggggg
     1141 accacaagac ccaaatgtgg ctaagaccaa gaacaacctg gcctcggcct acctgaagca
     1201 gaacaagtat cagcaggcag aggagctata caaggagatc ctcagccagg aggccctgcc
     1261 tgccccgctt ggagcccccc agggaggcac agcaggtgaa gcacaacagc aggtcctacg
     1321 caggagcagt tccttctcta agctcagaga gtccatccgg cgtggaagtg agaagctggt
     1381 ctcccgcctc cgaggggaga gcatggcagg ggctgcaggg atgaagagag ccatgtcact
     1441 caatatgctg aacgtcgatg gtccaagggc tgccaggatg cagctctcaa cccagcacct
     1501 gaatgaggcc tctcggaccc tcagcgccag cacgcaggat ttgagcccgc gctaagtgga
     1561 ctggctgcag tggtcacagc ttctcaggga tcaggaaggg tgggtgggtg gtctccctgc
     1621 accctgcctg ggcagcatgt gaggatgggg agggaccctg tgatcctccc tgcaattaaa
     1681 ggctgtgcac tggcactggg tgttcgccgg gggccctggg accttccctc acttcccggg
     1741 agccacagtc ccgtgttcag agctgctgtg caatctgctc aa
//
