LOCUS       XM_006244480            3547 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus kinesin family member 6 (Kif6),
            transcript variant X1, mRNA.
ACCESSION   XM_006244480
VERSION     XM_006244480.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244480.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006244480.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3547
                     /gene="Kif6"
                     /note="kinesin family member 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:171291"
                     /db_xref="RGD:621070"
     CDS             275..2683
                     /gene="Kif6"
                     /codon_start=1
                     /product="kinesin-like protein KIF6 isoform X1"
                     /protein_id="XP_006244542.1"
                     /db_xref="GeneID:171291"
                     /db_xref="RGD:621070"
                     /translation="MVKQTIQIFARVKPSVRKQQQGIYSIDEDEKLASSLEIVLPRDL
                     ADGFVNNKRESYKFKFQRIFDQEAKQEIIFEIIAKPVAESTLAGYNGTIFAYGQTGSG
                     KTFTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPR
                     HEASKLEDLPKVTILEDPDQNIHLKNLSLHQATTEEEALNLLFLGDTNRMIAETPMNQ
                     ASTRSHCIFTVHLSSKEPGSATVRHAKLHLVDLAGSERVSKTGVGGLLLTEAKYINLS
                     LHYLEQVIIALSEKHRTHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNIDESIS
                     TCRFAQRVALIKNEAILNEEIDPRLMIVRLQKEIADLKAELAMVTGEQRTEALTEAEL
                     LQLEKLIASFVEDQDPESRLEVGADLRKIHYCFHHFKKLLNDKKTLENTDSSESTTQQ
                     ACQEPVKDEEYTKLRSLLKQRDNEINILVNMLKKEKKKTQDALQYSSTEKSEARPPPN
                     SPFIAGSPAGQRTSFSSSLSQTQDLSVYRHRSSLLHKKTGMREEMSLGRQEAFEIFKR
                     DHADSVTIEDNKQVLKQRFSEAKALGESINEARSKIGQLKEAISQRHLQQVALGIAES
                     MAPPSTPDPQEQKLRAQLEEEKSRYKTTFMRLKALKVEIEHLQLLMDKAKLKLQKEFE
                     AWWAEEASSLQVNSPATNLQDAAKPFPQQDQTQLLSKKSSQGLEVENGAGKLDVCGRN
                     ARRILPSPCPSPHSQEPSGSSIQLQDRPSSIPLTGDRQTDSDILAFIKARQSILQKKC
                     LGSN"
ORIGIN      
        1 agcccaactc aggattgcaa accctttaac ccggctcaag agcatctccc acggacatgc
       61 gcggcaatcc ctgctcggtc ccgcccctca gccggtcctc ttggtccacg accaataggg
      121 cgaggaggcg ggaacccgga gcccgcggtg ctgcttgggt agcatctttg gttactgttg
      181 ctaaggcagc ggcgtctgca ggtggtggga gtaggaagtt ttaggtggtc tggactcgga
      241 aaggtcaagg gtcagtacgg agtctccgcc ggtgatggtg aagcaaacga tccagatttt
      301 cgctagggtg aagccctcgg tgcggaagca gcagcaaggg atttattcca tagatgaaga
      361 tgagaaacta gcgtctagct tggaaattgt cttaccccgg gacctggcag acggattcgt
      421 aaacaataaa cgagaaagct acaagtttaa gtttcaaagg atttttgacc aagaggctaa
      481 gcaagagatc attttcgaga tcattgccaa accagtcgct gagagtacct tggcaggtta
      541 caatggcacc atcttcgcat atgggcagac gggcagtggc aagacattca ccatcacagg
      601 cggggctgag cgctacagtg acagaggcat catcccgagg accctgtcgt atatctttga
      661 gcagttgcaa aaggacagca gcaagatcta caccacacac atttcttact tggaaatcta
      721 caatgaatgt ggctatgacc tgctggatcc aagacatgaa gcctccaaac tagaagatct
      781 gccgaaagtg acaatattgg aggaccctga tcagaacatt cacctgaaaa acctgtctct
      841 tcatcaggca acaactgagg aggaagcttt gaacctgctc ttcttgggag acaccaacag
      901 gatgatcgcc gagactccca tgaatcaagc ttcaaccaga tcacactgta ttttcactgt
      961 gcacttgagc agcaaggagc caggatctgc cactgtccga catgctaagc ttcatctggt
     1021 tgatctggca gggtcagagc gtgtctcgaa gactggagtt ggaggcctgc ttctgacaga
     1081 agccaaatac atcaacttgt ccctacacta cctggagcag gtcatcattg ccctttcgga
     1141 aaaacaccgt acacatatcc cttacaggaa ctccatgatg accagcgtgc tcagagacag
     1201 cctgggaggg aactgcatga ccactatgat tgcaactctg tctttagaga agaggaacat
     1261 cgatgagtct atctccacct gcagatttgc tcagcgcgtg gccctaatca aaaatgaagc
     1321 catcctcaat gaagagattg atcccagact gatgatcgtc cgcctacaga aggagattgc
     1381 agacctgaag gcagagctgg ccatggtcac aggcgagcag aggacagagg ccctcacaga
     1441 agcggagctc cttcagttgg aaaaactaat agcatccttt gtggaggacc aagatccaga
     1501 gagtagactg gaagttggcg ctgatctgcg taaaatccat tactgttttc atcattttaa
     1561 gaagctgttg aatgacaaga agaccctgga gaacactgac tcctctgaaa gcacaacaca
     1621 gcaagcgtgc caagagccag tgaaggatga agaatacaca aagctcagaa gtcttctcaa
     1681 gcagagggac aatgagatca atatcctggt caatatgtta aaaaaggaaa agaagaaaac
     1741 tcaagatgcc cttcagtatt caagcacaga gaaaagcgaa gctaggccac ctccgaactc
     1801 gcccttcatt gctgggagcc cggcaggtca gaggacctca ttctcctctt ccctgagcca
     1861 gacccaggac ctcagcgtct acaggcacag atccagcttg ctccacaaga aaacagggat
     1921 gagagaggag atgtcactgg gacgccagga ggcttttgag attttcaaga gggaccacgc
     1981 tgacagtgtc accatcgagg acaacaaaca ggttctgaag cagagatttt ctgaagcaaa
     2041 agctctggga gaaagtataa atgaagcaag aagtaaaatc ggtcagctga aagaagccat
     2101 cagccagcgg cacctacagc aagtagctct tggaatcgca gagagcatgg ccccaccctc
     2161 cacgcctgac ccccaggaac agaaattgcg agcacagctg gaggaggaaa agagcaggta
     2221 caaaaccacc ttcatgcgcc tgaaagccct caaggtggag attgagcacc tgcagctgct
     2281 catggacaaa gccaagctca agctgcagaa ggagttcgaa gcctggtggg cagaggaggc
     2341 cagcagcctg caggtaaact cccctgccac gaacctccag gatgctgcga agccgtttcc
     2401 ccagcaggac cagacacaac ttctttccaa gaaaagttct caaggcttgg aagttgagaa
     2461 tggggctggc aagctggatg tctgtggtag gaatgccaga agaatcctcc cctctccttg
     2521 ccccagtccg cacagccaag agcccagtgg ctccagtatc cagctgcaag ataggccatc
     2581 atccatcccg ctcactggag acagacagac agactccgac atcctggcat tcatcaaggc
     2641 cagacagagc attctacaga agaaatgcct gggaagcaac tgactctgat gggagtccaa
     2701 gctcgtcctg cagacggaat ggctaacgag acgatgcaga gcctgcccct tactagtgac
     2761 ctcagatacg atggaaagac accctatgga gcagctgacc agtttgaggc caaaggagga
     2821 gaacgacttt tagaggacaa tgtctgggag agcaccagag agggcatata gggctgacag
     2881 aaggtcctga cagaactgct gacagggtgg gctgtacaga gagctggagg caagccaggg
     2941 ctgctgctca ccgacatgtt taggctgggg acattccagg tagtgctgct caggaggatg
     3001 atctacttgc caaccatcgc ccaagtccgc ccctattctc aagcccagga atggctgtgg
     3061 caagctaggc aggccttcac agccctagat cagaatgtag ggcaccttca gtgccaccgt
     3121 gccagcccaa accatcaccc acttgccctg tctccaggga gctgtaccct gcagtctgag
     3181 gacctcacag taccacagaa cacgggcagc tagctactca gagctcagca gctaccagtt
     3241 ccttgagcca tcaccccacc aagttgcatg gggctctaca aaattaaagc ctaaactccc
     3301 tgtcccacag ggggacatag ctgcctaatg gtcttgcctc agtgaccctc ccagaatccc
     3361 acggccagca tcccatggcc agcatcccgc accctgagcc tgtgacttgg actaagtaga
     3421 cacaagaggg gaacacagtc agcagatacc tgtactgggg tcccaacgca actccagttg
     3481 ggtggcaatg gagaggcaga gacgggtgcc cagaaatgat tacagctgaa taaaaatacc
     3541 tgacaaa
//
