LOCUS       NM_001107783            5405 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus kinesin family member 16B (Kif16b), mRNA.
ACCESSION   NM_001107783 XM_001053202 XM_230634
VERSION     NM_001107783.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5405)
  AUTHORS   Ueno,H., Huang,X., Tanaka,Y. and Hirokawa,N.
  TITLE     KIF16B/Rab14 molecular motor complex is critical for early
            embryonic development by transporting FGF receptor
  JOURNAL   Dev Cell 20 (1), 60-71 (2011)
   PUBMED   21238925
REFERENCE   2  (bases 1 to 5405)
  AUTHORS   Trost,M., English,L., Lemieux,S., Courcelles,M., Desjardins,M. and
            Thibault,P.
  TITLE     The phagosomal proteome in interferon-gamma-activated macrophages
  JOURNAL   Immunity 30 (1), 143-154 (2009)
   PUBMED   19144319
REFERENCE   3  (bases 1 to 5405)
  AUTHORS   Blatner,N.R., Wilson,M.I., Lei,C., Hong,W., Murray,D.,
            Williams,R.L. and Cho,W.
  TITLE     The structural basis of novel endosome anchoring activity of KIF16B
            kinesin
  JOURNAL   EMBO J 26 (15), 3709-3719 (2007)
   PUBMED   17641687
REFERENCE   4  (bases 1 to 5405)
  AUTHORS   Hoepfner,S., Severin,F., Cabezas,A., Habermann,B., Runge,A.,
            Gillooly,D., Stenmark,H. and Zerial,M.
  TITLE     Modulation of receptor recycling and degradation by the endosomal
            kinesin KIF16B
  JOURNAL   Cell 121 (3), 437-450 (2005)
   PUBMED   15882625
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Oct 2, 2008 this sequence version replaced NM_001107783.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.13419.1,
                                           SRR26643299.16207.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               JAXUCZ010000003.1  150707483-150707585 c
            104-173             JAXUCZ010000003.1  150675149-150675218 c
            174-287             JAXUCZ010000003.1  150672168-150672281 c
            288-404             JAXUCZ010000003.1  150667414-150667530 c
            405-502             JAXUCZ010000003.1  150664518-150664615 c
            503-612             JAXUCZ010000003.1  150663785-150663894 c
            613-755             JAXUCZ010000003.1  150660426-150660568 c
            756-924             JAXUCZ010000003.1  150658884-150659052 c
            925-1056            JAXUCZ010000003.1  150658595-150658726 c
            1057-1232           JAXUCZ010000003.1  150657557-150657732 c
            1233-1298           JAXUCZ010000003.1  150648824-150648889 c
            1299-1358           JAXUCZ010000003.1  150645363-150645422 c
            1359-1478           JAXUCZ010000003.1  150557133-150557252 c
            1479-1530           JAXUCZ010000003.1  150556264-150556315 c
            1531-1668           JAXUCZ010000003.1  150554513-150554650 c
            1669-1751           JAXUCZ010000003.1  150539604-150539686 c
            1752-1840           JAXUCZ010000003.1  150538196-150538284 c
            1841-1894           JAXUCZ010000003.1  150516517-150516570 c
            1895-3238           JAXUCZ010000003.1  150512330-150513673 c
            3239-3391           JAXUCZ010000003.1  150507032-150507184 c
            3392-3485           JAXUCZ010000003.1  150503808-150503901 c
            3486-3536           JAXUCZ010000003.1  150502367-150502417 c
            3537-3659           JAXUCZ010000003.1  150489132-150489254 c
            3660-3749           JAXUCZ010000003.1  150472621-150472710 c
            3750-3833           JAXUCZ010000003.1  150450510-150450593 c
            3834-5405           JAXUCZ010000003.1  150428352-150429923 c
FEATURES             Location/Qualifiers
     source          1..5405
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..5405
                     /gene="Kif16b"
                     /note="kinesin family member 16B"
                     /db_xref="GeneID:311478"
                     /db_xref="RGD:1310146"
     exon            1..103
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..3992
                     /gene="Kif16b"
                     /codon_start=1
                     /product="kinesin-like protein KIF16B"
                     /protein_id="NP_001101253.2"
                     /db_xref="GeneID:311478"
                     /db_xref="RGD:1310146"
                     /translation="MASVKVAVRVRPMNRREKDLEAKFIIQMEKSKTTITNLKIPEGG
                     TGDSGRERTKTFTYDFSFYSADTKSPDYVSQETVFKTLGTDVVKSAFEGYNACVFAYG
                     QTGSGKSYTMMGNSGDSGLIPRICEALFSRINETTRWDEASFRTEVSYLEIYNERVRD
                     LLRRKSSKTFNLRVREHPKEGPYVEDLSKHLVQNYSDVEELMDAGNINRTTAATGMND
                     VSSRSHAIFTIKFTQAKFDAEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNIN
                     KSLVTLGNVISALADLSQDAANPLVKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIAT
                     ISPADVNYGETLSTLRYANRAKNIINKPTINEDANVKLIRELRAEIARLKTLLAQGNQ
                     IALLDSPTALSMEEKLHQNEARVQELTKEWTNKWNETQNILKEQTLALRKEGIGVVLD
                     SELPHLIGIDDDLLSTGIILYHLKEGQTYVGREDASTEQDIVLHGLDLESEHCVFENA
                     GGTVTLIPLSGSQCSVNGVQIVDATQLNQGAVILLGRTNMFRFNHPKEAAKLREKRKS
                     GLLSSFSLSMTDLSKSCENLSAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQK
                     SDKAELERMQQEVETRRKETEIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEE
                     RLREQQGLEQQKRQEEDSFFRIREELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQS
                     AKLQLEKRRLEEQEKEQVLRVAHLEEQLRKRQDTAPLLCPGEAQQAQEERRELEGIRG
                     ALLQAKEIRAGGDHTFRGELERAQQYFLEFKRRQLVKLATLEKDLVQQKDRLSKEVQE
                     EKEALEHVKCEAGEEPSLLATDNCNILCGPQDLDKIKTAESRLQSKEHQLQDLLQNHL
                     PALLEEKQRVLEILDCGVLGLDNILYHVEKEMEEKEEQITQYQANASQLQQLQATVQF
                     TANVARQEEKVRRKEKEILESQEKQQREALEQAVAKLEQRHSALKRRSTLDLEIQEQR
                     QKLGSLHSSEWPGLQASLEANGERLQMDPARIEHEIHELKQKICEVDGVQRPHHGTLE
                     GKAALSSLPPSAENSHLAPLMDARISAYIEEEVQRRLHDLHRVISDASHAPAELKSNE
                     ELHNGATQRKLKYERMYSRSLGANPDDLKDPIKISIPRYVLCGQGKDEHFEFEVKISV
                     LDETWTVFRRYSRFREMHKTLKLKYAELAALEFPPKKLFGNKDERVVAERRTHLEKYL
                     REFFSVMLQSETSPLHINKVGLTLSKHTICEFSPFFKKGVFDYSSHGTG"
     exon            104..173
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            174..287
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            288..404
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            405..502
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            503..612
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            613..755
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            756..924
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1056
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1232
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1233..1298
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1358
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1359..1478
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1479..1530
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1531..1668
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..1751
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1752..1840
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1841..1894
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            1895..3238
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3239..3391
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3392..3485
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3486..3536
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3537..3659
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3660..3749
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3750..3833
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
     exon            3834..5405
                     /gene="Kif16b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggccgcgg ggcgcaggcc tggtgaaagc ccccgcgggc cgggccgtga tgagctatgg
       61 catcggtcaa ggtggccgtg agagtccggc ccatgaatcg cagagaaaag gacttggagg
      121 ccaagttcat cattcaaatg gagaaaagca aaacgacaat cacaaactta aagataccag
      181 aaggaggaac tggggattca ggcagagaac ggaccaagac cttcacctat gacttctctt
      241 tttattctgc tgacacaaag agtccagatt atgtttcaca agaaacggtt ttcaaaactc
      301 tgggcacaga tgttgtgaaa tctgcatttg aaggttataa cgcttgtgtc tttgcatatg
      361 ggcaaactgg atccggaaag tcctacacta tgatgggaaa ttctggggat tctggcttaa
      421 tacctcggat ctgtgaagct ctcttcagtc ggatcaatga aaccactaga tgggatgaag
      481 cctcttttag gacagaagtc agctacttag aaatttataa tgaacgtgtg agagacctac
      541 ttaggcggaa gtcatctaag accttcaatt taagagtccg tgagcatccc aaagaaggac
      601 cgtatgttga ggatttatcc aagcatttag tccagaatta cagtgatgtg gaagaactta
      661 tggacgcagg aaatatcaat cgtaccactg cagcgacggg gatgaatgat gtcagtagca
      721 ggtcgcacgc catcttcacc atcaagttca ctcaggcaaa gttcgacgcc gaaatgccgt
      781 gtgaaactgt gagcaagatc cacctggtcg accttgcagg aagtgagcgg gcagatgcca
      841 ctggtgccac tggggtcaga cttaaggaag ggggcaacat aaacaagtcc cttgtgactc
      901 tgggaaatgt catttctgcc ttagctgatt tatctcagga tgcagccaac cctcttgtga
      961 agaagaagca agtttttgtg ccttacaggg attcagtttt gacttggctg ttgaaagaca
     1021 gccttggagg aaactctaaa accatcatga ttgccaccat ttcacctgct gatgtcaatt
     1081 atggagaaac cctaagtacc cttcgctatg caaatagagc caaaaacatc atcaacaagc
     1141 ctaccattaa tgaggatgcc aacgtcaaac tcatccgtga gctgcgagct gaaatagcca
     1201 ggctgaaaac cctgctcgct caagggaatc agattgctct cttggactcc cctacagctt
     1261 taagtatgga ggaaaaactt caccagaatg aagcaagagt ccaagaattg accaaggaat
     1321 ggacaaacaa gtggaatgag acccagaata ttttgaaaga gcaaacccta gcccttagga
     1381 aagagggcat tggtgtggtt ctggactctg agctgcctca cctgattggc attgatgatg
     1441 accttctgag tacaggaatc atcttgtatc acttgaagga aggtcagact tacgttggca
     1501 gagaagatgc ttcaacagag caagatattg tccttcatgg ccttgacttg gaaagtgagc
     1561 attgtgtctt tgagaatgct gggggaactg tgactctgat acccctgagt gggtcccagt
     1621 gctctgtgaa tggtgttcag attgtggatg ccacacagct aaatcaaggt gctgtgatac
     1681 tcttgggaag aaccaacatg ttccgcttta accatccgaa ggaagctgcc aaacttaggg
     1741 agaagaggaa gagtggcctc ctgtcctcct tcagcttgtc tatgaccgac ctctcaaagt
     1801 cctgtgagaa cctgtccgca gtcatgttgt ataaccctgg acttgaattt gagagacaac
     1861 agcgtgaaga acttgaaaaa ctagaaagta aaaggaaact catcgaagag atggaggaaa
     1921 agcagaagtc ggacaaggca gagctagagc gaatgcagca ggaggtggaa accaggcgca
     1981 aggaaacaga gattgtgcag cggcagatcc gcaagcagga ggaaagcctc aaacgccgta
     2041 gcttccacat tgaaaacaag ctgaaggatc tgctggctga gaaggaaagg tttgaggagg
     2101 agaggcttcg ggaacagcag ggactggagc agcagaagag gcaggaggaa gacagcttct
     2161 tccgcatcag agaagagctt cgcaggctcc aggagctcaa cagccatgaa caagccgaga
     2221 agggccagcc actccaggat ttggactggc tgcacagaga gcaagatgcc cagagtgcca
     2281 agctgcagct ggagaaaagg aggctggagg agcaagagaa ggagcaggtg ctgcgggtgg
     2341 cacacctgga ggagcagctt cggaagaggc aggacactgc tcctctgctg tgtcctggag
     2401 aggcccagca ggcccaagag gaaaggaggg aactggaagg catccgggga gccctcttgc
     2461 aggccaaaga gatcagagca ggaggggacc acaccttcag gggtgaactg gaaagggctc
     2521 agcagtactt cttagagttc aagagaagac agcttgtcaa gctagcaacc ctggagaaag
     2581 acctggtcca acagaaagac cgcctaagca aagaagtcca ggaagagaaa gaggccctgg
     2641 agcatgtaaa atgtgaagca ggtgaggaac cgagcttgtt ggcaacagat aattgcaaca
     2701 ttctctgtgg gcctcaggat ctagacaaaa taaagactgc agagtccagg ctgcagagca
     2761 aagagcacca gctacaggac cttctgcaaa atcatttgcc agctctgttg gaagaaaaac
     2821 agagagtgct tgaaatcctt gactgtggtg tcctaggcct agataacatt ctctaccacg
     2881 tagagaaaga aatggaagaa aaggaagagc agatcacaca gtaccaggct aacgctagcc
     2941 agctgcaaca gctccaggcc acagtccagt tcacagccaa tgtggccaga caggaagaga
     3001 aggtgagaag aaaggaaaag gaaatactgg aatcccagga gaagcagcaa agagaggcac
     3061 tggagcaggc tgtggctaag ctagagcaga ggcactccgc cctgaagagg cgttccaccc
     3121 tggacctgga gatccaggaa cagaggcaga aacttggctc tctccacagc agcgaatggc
     3181 cagggctaca ggccagtctg gaggccaatg gagagagact ccagatggac cctgcaagaa
     3241 tagaacatga aatccatgag ctgaagcaga agatctgtga agtagatggt gttcagagac
     3301 ctcatcatgg gaccttagag gggaaggctg ctctctccag cttgccaccc agtgctgaaa
     3361 actctcacct ggccccactg atggatgcca ggatcagtgc ttacattgag gaagaagtcc
     3421 agaggcgcct tcatgatttg cacagggtga tcagtgatgc cagccatgca cctgctgagc
     3481 taaagagtaa tgaggaactt cacaatggcg ccactcaacg taagctaaag tatgagcgga
     3541 tgtattctcg ctctttggga gcaaatccag acgacctgaa ggaccccatt aagattagta
     3601 ttccccgcta tgtcctgtgt ggtcaaggca aggatgaaca cttcgagttt gaagttaaga
     3661 tttctgtcct agatgagaca tggactgtat tcaggcgtta cagtcgtttt cgagaaatgc
     3721 ataaaacatt gaagctaaag tatgcagagc tcgctgctct tgaattccca ccaaagaagc
     3781 tgtttggaaa caaagacgag cgggtagttg ctgagcggcg gacacactta gagaaatacc
     3841 tcagggagtt tttcagtgtg atgctccagt ccgaaacatc tccccttcac atcaacaaag
     3901 tggggctgac cctgtccaag cacaccattt gtgaattctc accattcttc aagaaaggag
     3961 tctttgacta cagcagccat gggacagggt agaactgtgg tgaccaagga accaccaaca
     4021 cagtgccttc tcatcaaatt ctctctgatg cagagtggac tcctgcacca ggatcccagc
     4081 ctgcctcctc ctgttgtggc aacatgcagc agccagccca gaccacctca cacaccatat
     4141 ctagtgcctg agtttgggag tgggatgctt gcctgccaag ggcaaccctg attgacagtt
     4201 gttactgtac ctctgcactt gaatgtggcc tttcccatag tactttcttc tcattgtgca
     4261 gcgagtcagt cccccatggc aggatggata tgtggcttgc ttatctgggg tctcctagag
     4321 ccaagccaac ttgggacttg tgggtggctt accagaccac ccgttgagtg actttcatct
     4381 ggtttccttt ttcaccaaaa tacgcttgat ttttataccc cttccatgtg gctggataga
     4441 tttcaaagat gttttaagtt atgtcatatt gttttgttca tttggatttg gacttaataa
     4501 tatctaaata ctgacgttta catagaaggt cctgttcagg aaaaaggatc tgtaggccaa
     4561 tcatgagaag agtcttccat gcctgacaaa ttggatgtag gcaacattac ttaaaacttg
     4621 cagaaacccc tacaagtaag acattgttta accttcaaca gttgagggca ttttccccga
     4681 cctcaatggc tgttgttcat gttttagctt tttctgcata aaacaaatgc aaagccggat
     4741 gcaatctttt aaatatcctc ttgttcatgt tttagtacag aatcttcagg atcattaact
     4801 aaaaagagag agagaatttt cagtagttta ttaacaatcc ctcaattact caggacatat
     4861 gtagcatttc acatgtatac agtgaaactg ctcccttcat caaaagaaaa ttgtgagtag
     4921 gaaaaatatg tggtatatat tgaaatgtac ataattctac atatagattt atatgtatac
     4981 actcctgtat gatagtatat caggctatat gatcattcac accaaattta ttaaaggtgt
     5041 ttgctttttg aactgttaaa ttgagctgct atcaatatta aatgaagtca tgtgctctac
     5101 cctgtagctc agtttaagtt tataatatga tcattcctac tggtctgttt aacaattgat
     5161 ctggtgtgct tagaaagatg catattgtat aatttagcat ttatgttgca gaaaatgcag
     5221 ctatgattga agtcacaaat gaatggataa caaaacatac ttgcattcag aacacgccgg
     5281 cacagcagat ctctccaacc tcacaagaat gttggaagat gcagctatcc ctgtaaggag
     5341 gggactaata ttccattaat taaatatcat agcttagatg aaaaaataaa atggactctt
     5401 tattt
//
