LOCUS       NM_001107462            6733 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus kinesin family member 13A (Kif13a), mRNA.
ACCESSION   NM_001107462 XM_001058501 XM_217893
VERSION     NM_001107462.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6733)
  AUTHORS   Montgomery,A.C., Mendoza,C.S., Garbouchian,A., Quinones,G.B. and
            Bentley,M.
  TITLE     Polarized transport requires AP-1-mediated recruitment of KIF13A
            and KIF13B at the trans-Golgi
  JOURNAL   Mol Biol Cell 35 (5), ar61 (2024)
   PUBMED   38446634
  REMARK    GeneRIF: Polarized transport requires AP-1-mediated recruitment of
            KIF13A and KIF13B at the trans-Golgi.
REFERENCE   2  (bases 1 to 6733)
  AUTHORS   Sagona,A.P., Nezis,I.P., Pedersen,N.M., Liestol,K., Poulton,J.,
            Rusten,T.E., Skotheim,R.I., Raiborg,C. and Stenmark,H.
  TITLE     PtdIns(3)P controls cytokinesis through KIF13A-mediated recruitment
            of FYVE-CENT to the midbody
  JOURNAL   Nat Cell Biol 12 (4), 362-371 (2010)
   PUBMED   20208530
REFERENCE   3  (bases 1 to 6733)
  AUTHORS   Delevoye,C., Hurbain,I., Tenza,D., Sibarita,J.B., Uzan-Gafsou,S.,
            Ohno,H., Geerts,W.J., Verkleij,A.J., Salamero,J., Marks,M.S. and
            Raposo,G.
  TITLE     AP-1 and KIF13A coordinate endosomal sorting and positioning during
            melanosome biogenesis
  JOURNAL   J Cell Biol 187 (2), 247-264 (2009)
   PUBMED   19841138
REFERENCE   4  (bases 1 to 6733)
  AUTHORS   Nakagawa,T., Setou,M., Seog,D., Ogasawara,K., Dohmae,N., Takio,K.
            and Hirokawa,N.
  TITLE     A novel motor, KIF13A, transports mannose-6-phosphate receptor to
            plasma membrane through direct interaction with AP-1 complex
  JOURNAL   Cell 103 (4), 569-581 (2000)
   PUBMED   11106728
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473977.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001058501.1, XM_217893.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMD00132291, SAMD00132293
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..6733
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..6733
                     /gene="Kif13a"
                     /note="kinesin family member 13A"
                     /db_xref="GeneID:308173"
                     /db_xref="RGD:1307825"
     exon            1..91
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            92..152
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     CDS             122..5191
                     /gene="Kif13a"
                     /codon_start=1
                     /product="kinesin-like protein KIF13A"
                     /protein_id="NP_001100932.1"
                     /db_xref="GeneID:308173"
                     /db_xref="RGD:1307825"
                     /translation="MDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSG
                     KSFSMMGHAEQLGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKG
                     SRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHA
                     VFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTT
                     LGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEET
                     LSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLE
                     ESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNAD
                     PALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIATDGDITLTPKENARSC
                     VNGTLVCSVTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETSATEHDLDAASE
                     ASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRTALEEQRLMYERELE
                     QLRQQLSPERQPPSSASDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANT
                     LVREANFLAEEMGKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQARRKGKSTQVWTI
                     EKLENKLIDMRDLYQEWKENVPKAKRLCGKRGDPFYEAQENHNLIGVANVFLECLFCD
                     VKLQYAVPIISQQGEVAGRLHVEVMRVTGTVPERVSEDDSSENSSESGSLEVVDSSGE
                     VIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQYESTVAAPVVDPDVPSPQSKD
                     AQYTVTFSHCKDYVVTVTEEFLEFISDGALAVEVWGHRCAGNGSPIWEVDSLHAKTRT
                     LHDRWNEVTRRIEMWISILELNELGDYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTV
                     KPVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRR
                     EYLDEQIKKVSNKKEKTEDDMEREARLVEQWVGLTEERNAVLVPDPGSGIPGAPADWV
                     PPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDD
                     EVSATASWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYN
                     KQSFTQSLKRRISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTLD
                     GETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKTRHIRRSLSTPNVHNVSSSRP
                     DLSGFDEDDKGWPENQLDVSDYSSSYQDVACYGTLPRDSPRRSKEGCPSENPHALTIS
                     PFKAFSPQPPKFFKPLMPVKEEHKKRMALEARPLLSQEDSEEEENELEAVSRKLMHAQ
                     PYVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSRSPTTSSLTSGYFSHSAS
                     NATLSDMAVPSSDSSDQLALSTKEAECREHSGPSLAPDFTPASTQELTEAERGLGKDK
                     TITVPLEENSALPQGSPSPQSIPEENPRMPCRTALGSELDAGPSKEGHQAREFCPGEV
                     TIEHTTNILEDHSFTEFMGVSDGKDFDGLADCSVGEPSSRTDLTIETGRKGIPEGPPD
                     AGQLHSKIENDQTLHPFSEIP"
     exon            153..245
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            246..426
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            427..514
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            515..649
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            650..762
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            763..874
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1087
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1088..1198
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1333
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1464
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1465..1551
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1552..1718
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1719..1932
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1933..2095
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2096..2236
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2237..2386
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2387..2548
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2549..2722
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2723..2874
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            2875..3007
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3008..3154
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3155..3254
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3255..3381
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3382..3437
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3438..3562
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3563..3739
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3740..3832
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3833..3985
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            3986..4063
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            4064..4111
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            4112..4217
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            4218..4369
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            4370..5161
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            5162..5233
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
     exon            5234..6733
                     /gene="Kif13a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctggaact gaacaccaag tgcgtggtgg agatggaagg gaaccagacg gtcctgcacc
       61 ctcctccttc caacaccaag cagggagaaa ggtgtttgcc tttgattact gcttttggtc
      121 catggacgag tcgaacacga caaaatatgc cggtcaagaa gtcgttttca agtgcctcgg
      181 ggaagggatt cttgagaaag cctttcaggg atacaatgcc tgtatttttg catatggcca
      241 gacaggctct ggaaaatcct tttccatgat gggccatgcc gagcagctag gcctgatccc
      301 aaggctctgc tgtgctctgt ttcaaaggat ctccctggag caaaacgagt cacaaacatt
      361 taaagtcgaa gtatcgtata tggagattta taatgagaag gtccgggacc tcctggaccc
      421 caaagggagc aggcagtctc ttaaagtccg agaacataag gtcttaggac cctatgtcga
      481 tggcctatct caactggcgg tcaccagctt tgaggacatt gagtcactga tgtctgaggg
      541 aaataagtct cgaacggtag cagcaaccaa catgaatgaa gagagcagcc gctcccatgc
      601 ggtgttcaac atcatcatca cacagacact gtatgaccta cagtctggga actctggtga
      661 gaaagtcagc aaggtgagcc tggtagacct ggcgggcagc gagagggtgt cgaagactgg
      721 agctgcgggg gagcgactga aagaaggcag caacattaac aaatcactta caaccttggg
      781 attggttata tcatcgctgg ctgaccaggc tgctggcaaa ggcaaaaaca aattcgtacc
      841 ttatcgagat tcagtcctca cttggcttct taaggacaat ttaggtggga acagccagac
      901 ctctatgata gcaaccatca gcccagcagc agacaactac gaggagacac tgtccacgct
      961 aagatacgca gaccgagcca agaggattgt gaaccacgct gtcgtgaacg aggaccccaa
     1021 tgccaaggtc atccgagagc tgcgagagga agtggagaaa ctgagagagc agctctcaca
     1081 ggctgaggcc atgaaggccc ccgagctgaa ggagaagctg gaagagtctg agaagctgat
     1141 aaaggagctc acagtgacgt gggaagagaa gctgaggaaa acggaagaga tcgcacagga
     1201 gaggcagcgg cagctggaga gcatggggat ctccctggag acctctggca tcaaggtggg
     1261 ggatgacaag tgctacctcg tcaacctgaa tgcagaccct gccctcaacg agcttctggt
     1321 ttactattta aaggatcaca cgcgggtggg tgctgatacc tctcaggaca tccagctctt
     1381 tggaataggg attcagcccg agcactgtga gatcgacatc gcaacggatg gagatatcac
     1441 tctcacgccc aaagaaaacg caaggtcctg tgtaaatggc accctggtct gcagcgtgac
     1501 ccagctgtgg catggtgaca ggatcttatg gggaaacaac cactttttca gaattaactt
     1561 gcctaagagg aaacggcggg actggctgaa agactttgag aaagaaacca gcgccacgga
     1621 gcatgatcta gacgctgcga gtgaggcctc ctcagaacca gactacaact acgagttcgc
     1681 acagatggag gtcatcatga aaacactgaa cagcaatgat ccagttcaaa atgtggttca
     1741 ggtcctggaa aagcagtacc tggaagagaa gaggacggcc ctggaggagc agcggctcat
     1801 gtatgagcga gagctagagc agctccgtca gcagctctct cccgagaggc agccgcccag
     1861 cagcgcctcc gatcgcctgg cctacagcag ccagacagcc cagcagaaag tgacccagtg
     1921 ggctgaggag agggatgaac tctttcggca gagcttggcc aagcttcgag agcagctggt
     1981 gaaagccaac actttggtga gggaagccaa cttcctggct gaggagatgg gcaaactcac
     2041 tgactaccaa gtgactcttc agatccctgc ggccaacctc agtgccaaca ggaagagagg
     2101 agcgattgtc agtgagcccg ccatccaggc caggaggaaa ggaaagagca cccaggtctg
     2161 gaccatcgag aagctggaaa ataagttaat tgatatgaga gacctttacc aagaatggaa
     2221 agaaaatgtc cccaaggcta agaggctctg tgggaaacga ggtgaccctt tttatgaagc
     2281 tcaggagaat cacaacctca tcggtgtggc taacgtgttt ttggaatgtc tcttctgtga
     2341 tgtgaagctt caatatgcag tacccattat cagccagcag ggggaggttg ccgggcgtct
     2401 ccacgtggag gtgatgcgtg ttacaggaac tgttccagag cgcgtgtcgg aggatgactc
     2461 ttccgagaac tccagtgaga gtgggagtct tgaagtggtg gacagcagcg gggaagtcat
     2521 ccaccgggtc aaaaaactga cgtgccgggt gataattaaa gaggcaacgg ggctacccat
     2581 aagcctctcg aatttcgtct tctgtcagta cacgttctgg gaccagtatg agtctacagt
     2641 ggctgccccg gtggtggacc cggacgtgcc gtcccctcag tctaaggatg cccagtacac
     2701 agtgaccttc tctcactgta aggactacgt ggtaactgtc acagaagaat tcctagagtt
     2761 catttctgat ggcgcgctgg cagttgaagt gtggggccac aggtgtgctg ggaacggaag
     2821 ccccatctgg gaggtcgatt ccctccacgc gaagacaagg acattacacg acaggtggaa
     2881 tgaagtgacc cggagaatag agatgtggat ctccatattg gaactgaatg agctaggaga
     2941 ctacgccgca gtagagcttc accaggcgaa ggacgtcaac accggcggcg tcttccaact
     3001 cagacagggt cactcccgta gagtacaggt cacagtaaaa cctgtgcagc attcggggac
     3061 gctgccactc atggttgaag ccatcctatc agtatccatt ggctgtgtga ctgccagatc
     3121 caccaagctg caaagagggc tggacagtta ccaggaggaa gacttgaatt gtgtaagaga
     3181 gagatggtca gatgcgctca ttaaacgacg ggaatactta gacgaacaga ttaaaaaagt
     3241 cagcaataaa aaagagaaaa cagaagatga catggagcgg gaagccaggc tggtggagca
     3301 gtgggtgggg ctgacggagg agaggaatgc tgtgctggtg cctgaccctg gcagcgggat
     3361 cccgggggca cctgctgact gggtcccacc tcctggcatg gaaacccaca tccccgttct
     3421 cttcctggat ctgaacgcgg atgacctcag tgccaatgag cagctggtgg gcccccacgc
     3481 gtcgggagtg aactccatcc tgcccaagga gcatggcagc cagtttttct acctgcccat
     3541 cataaagcac agtgatgacg aggtttcagc cacagcctcc tgggactcct cggtgcacga
     3601 ctctcttcac ctgaaccggg tcacaccaca gaacgagagg atctacctga tcgtgaagac
     3661 caccgttcag ctcagccacc cggccgccat ggagttagtg ttgcggaagc ggattgcagc
     3721 caatatttat aacaagcaga gtttcacgca gagtttaaag aggcgaatat cactgatcaa
     3781 tatatgttac tcctgcggcg tgacctatga gatagtgtcc aatataccaa aggctaccga
     3841 ggagattgag gaccgggaga cgctggccct cctggcagct cggagtgaga acgagggcac
     3901 tttggatggg gagacgtaca tcgagaagta cactcggggt gtgctgcagg tcgagaacat
     3961 cctgagtctg gagcggctcc ggcaggccgt cacggtgaag gaagcgctct ccaccaaaac
     4021 gaggcacatt cggagaagcc tcagtacacc gaatgttcac aacgtctcct ctagccggcc
     4081 agatctctct ggcttcgatg aagatgataa gggctggccc gagaaccagt tagacgtgtc
     4141 tgactacagc tccagttacc aagatgtcgc atgctatggg accttaccca gggactcgcc
     4201 tcgcaggagc aaggaaggtt gcccatcaga gaatcctcat gccttaacca tcagcccttt
     4261 taaagcgttc tctcctcagc caccaaagtt cttcaaaccc ctaatgcctg taaaagagga
     4321 acacaagaaa agaatggccc tggaagcgag acctctccta agccaagagg actccgaaga
     4381 ggaggaaaat gagctggaag ctgtcagccg gaagctgatg cacgcacagc cttacgtgcc
     4441 cgtggagttt gctgacttca gtgtttacaa tgccagcttg gagaacaggg agtggtcgtc
     4501 ttctaaagca gacctgacag actccagagc cttggagaaa gcagtgtctc gtagccctac
     4561 caccagcagc ctcaccagtg gctacttctc ccacagtgcc tccaacgcca ctctgtctga
     4621 catggcagtc ccttccagcg acagctcaga ccagctagcc ctctccacca aggaggccga
     4681 gtgccgggag cactcgggac catcactcgc acccgacttc acaccagctt cgactcaaga
     4741 gcttactgaa gcagaaagag gcttggggaa ggataagaca atcaccgtgc ctctcgagga
     4801 gaacagtgcc ttaccccagg ggagcccatc accccagagc atccccgagg aaaatcccag
     4861 aatgccgtgc aggactgctt tgggttcaga actggatgcc ggccccagca aagagggcca
     4921 ccaagccaga gaattctgcc caggagaggt gacgatagaa cacactacga acattttgga
     4981 ggaccactcc ttcacagagt tcatgggtgt gtccgatggc aaagacttcg atggtttggc
     5041 agattgttcc gtaggagagc cctccagtag gacggatcta accattgaaa caggccgtaa
     5101 aggtatccca gagggtcccc cagatgctgg ccagctgcat tccaagatag agaacgacca
     5161 gacgcttcac ccgttctctg agattccata gtgaattcca tctggtctga cccttcacaa
     5221 agccccctgg agggaaacca cggccactcg gtaagggaca gccatgcctc tctgggccac
     5281 agctccggca gcttcgtcgg tcccaccctg ggacatgctc ttcagacagc tgtgacccag
     5341 cttgacctca gaccagcatg ggggagccct gcacttcccc tccccagtgg gagaagtagc
     5401 actttgtccc atggcgaatc acggcccctg ctctttccag agaggaagag aatgaaaatc
     5461 ttggcttacc tacgtggcag tattctcatg agcacttcgt acacgcccca ctgtgcaaag
     5521 acctccacag actcaaacgt tattcttgta cgtttttaat cagttcttcc tgcagactct
     5581 ggagtcagtg ctctgatccc ttttttataa ataatatata ttatgtatat gaatttgtgt
     5641 atctatggta tgtctgttca gagacatatc tgcacactaa aaggcagata gatgatttgt
     5701 cgaaaatcac aaggtactgg actttgttac aaagcgaccc tggtgactgc tttgacacga
     5761 gcagatgaaa agcgttattt tatattctgt aagaatgagg ttctaaatcc ctctttatag
     5821 aaaaggttgc aggcactgtt ctttataacc aaagaacttc caggagactg aacgtctttg
     5881 ctgtccactc tgttctgtgt gagtgatgta atctcactcc agtgtggtgc catacttccc
     5941 ttggctaccg agccacgtgc tgccctggtc cctgccccct ttcctaagca cacagaaacc
     6001 atacagctac aacagtcttc cacctagcct gggacctatt gacttgacat tgaccattga
     6061 ctcggctggg gctctgtctt cccccctagc atttgtcatg tcttgtccac ctgtgcaagc
     6121 aggtggggtg cacagggcag tgtcacaaca gcaacgcaac aatgtaccaa gagttgggga
     6181 agagtcttgg ttggtggctt ctttatcagt ctgattcaga attgctagat tctcttgtgg
     6241 tggtggcttg ccattttgct cgactctaga aaatgctgaa gagaaggact gagctatcaa
     6301 gttcgtaggt ttacacgtca ccttgtttga gggggattag atatggaccg ctccgttgtc
     6361 attcttttcc cttttttttt ttttttcaaa gtatcctgcg aggagagaca ttgtaggatc
     6421 gtgcgtggaa gaattttaca aatatatttt atgtacttac tctgtagatg cctgtacaat
     6481 gttgtgttgt gaggaagtga gagagcatgt gcagcctgct gtacttttta ttttttaagt
     6541 ccttagcatt ggtgagggag gcctgggaga ctctattgaa aagctgctgt ttgtgtgtgt
     6601 ggtgagctga cggtagtgtt ttactatcat ccgttgaaaa caaaaactgt aatttatatt
     6661 ccctttcgac tttgtattta attggtacag atttgtgtgt gttttagaat acaaactgtc
     6721 taattcagag ttc
//
