LOCUS       NM_001144859            4152 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus Kiaa0408-like (Kiaa0408L), mRNA.
ACCESSION   NM_001144859
VERSION     NM_001144859.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4152)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jun 26, 2009 this sequence version replaced NM_001144859.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.1239051.1,
                                           SRR26360172.92843.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840132 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-197               JAXUCZ010000001.1  30458714-30458910   c
            198-442             JAXUCZ010000001.1  30452952-30453196   c
            443-784             JAXUCZ010000001.1  30451167-30451508   c
            785-864             JAXUCZ010000001.1  30450986-30451065   c
            865-2044            JAXUCZ010000001.1  30448210-30449389   c
            2045-4152           JAXUCZ010000001.1  30444208-30446315   c
FEATURES             Location/Qualifiers
     source          1..4152
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..4152
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /note="Kiaa0408-like"
                     /db_xref="GeneID:292199"
                     /db_xref="RGD:1307525"
     exon            1..197
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
     exon            198..442
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
     exon            443..784
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
     exon            785..864
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
     exon            865..2044
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
     exon            2045..4152
                     /gene="Kiaa0408L"
                     /gene_synonym="Kiaa0408; RGD1307525; Rgd1310049; Soga3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacactgagc tcagaagtcc tctgagggtg cagtttgcaa aggggtttgt caggactgct
       61 gtgggaaatg gatggacttt gttttgtaaa agaatcactg ctctttaaga caactagctc
      121 tctgccccgc ctcttccatt gctagactgg tcacgcagag cctgacttgc tgcaggacga
      181 cccccaagtg cgaggaggct ttattctaaa ggcaagtgag accacttcaa atcacagttt
      241 aacaattcca agctaagaga aggcagagat gagcagaaat cctttggctg acgcgtacac
      301 agttgccgtg gacctgcatg agcagtgcga gaccacagag gccaactggc ataaggaaaa
      361 gatggagtta ctggaccagt ttgacaatga aagaaaagaa tgggagagtc agtggaggat
      421 catgcagaag aggatcgaag agctctgcca ggaagtcaag ctgcggagga aaatgaacat
      481 gaatgaacat tctaaggtca tttgtctttg tcatgatcaa gataaaatgg aatttcctcc
      541 aaatccaaac ttaggacaat gcgaattcag agtgttcaac caccgagatg atccagaaaa
      601 ggaaaagaaa agagaaaggg atttccttgg ggaagaaagt caagtgtctc cagaacaaaa
      661 tatacacaga gaaaccaaag tggggtttca gaatcctttg gccacagaca ggaaggcatg
      721 tgaggcttgg gctggtgaga cgacctctaa ggatagtaaa gattgttctg tcgcccttaa
      781 caccgctctt gaagaacttg caaaagttag tgaagaattg tgcacctttc aagaggaaat
      841 ccgaaagcgt gctaaccaca gaaggatgaa atcagatcct gttctgcagg aaatgccaaa
      901 tgtaacccat gtgcctcatg aggaccactt gatcagcaat ggccaggtca ttcttctaac
      961 caatttggag aaagaaaagc agagcaagaa tccgagctgc caatggactc caaaacagtt
     1021 ctgtgggcaa ctgtgttcca ttggcacaac tggtttacaa agaaccgcaa caccaccagc
     1081 tcctcctcca agaagtacct ctcggaatct ttccaggtca tattctgaac aagcccagga
     1141 aagactgaag gaaagtttat accacaggtg ggtggcccat gagagtcaag acaaaacaaa
     1201 taacaatcct catttcctct tgaggcagtc cccattgttt ccacaagaag gcaagagtat
     1261 gaaagacagt accatgtttt cctcttggat accagaagtc aaactagata gacagcttcc
     1321 aggtaacaaa gacattggac ttaatttgtg gtcatgtgac actgtattag gtacaaaaga
     1381 gagcctttcc aggccatctc aaaaaactgg ttttacctcc agtgcagcaa aatctgctaa
     1441 ggtgactcca gataacccta tgaaatcgca tcttgatctt catgtgaaaa atgactttct
     1501 tccctcagtg acactgaggg acccagttag aagttacaac tacaactttg aaccaactcc
     1561 aaggaatgaa aagctggccg caaagatcga tgagttgcac agaacggttt ttagaacaga
     1621 cagaggttgt caagcaatac aggaaaatga aagctataca aaatcacctg acaatctcaa
     1681 tacctgtgct gtctctactg ctcacagagc tgacatacca gaaagtgaca aagggaccag
     1741 cgttctgaaa gagactgaca gcgtgcctgt gcccatggaa aatgtgttca gtgatcccac
     1801 agaagcatcc acagtaggcc tgctcaaaca aatgcagaca cgagagagtc ccagcagctg
     1861 tcagctgatg tcccatgagc atgactggag accaagcgat ttttctagcc ggccaaggtc
     1921 agctgatccc aaatcaaatt acggtgttgt ggaaaagttg ttgaaaacct atgagactga
     1981 gacaaggtct gcactgcaaa attcaaaatg cttcagggat aactggacca aatgtggttc
     2041 tgatgagtcc atagcagtga aagcctccaa tggaaaagga ttttcccgac ctgccagacc
     2101 agccaatcgc cggctcccat ccagatgggc ctcccgatca ccatctgcac ccccagcctt
     2161 gcggaggaac ccacagctat aaagtctctc tgcaaaccga agcccagacg ctctaggtct
     2221 ctagcctgga ttgctggatt acaaaggcta tcataccttt tgctaaactg aatcttcaga
     2281 atgtttacaa acagtcctgt tctcatctgt atcttctaag accactggga caagcaatcc
     2341 aaatcctagc tttccatcag tcttcagtgt ttttaatcta tgggatcatt atctccttgt
     2401 actttaattt ctcacattag attttttatt gccatcctca ttgattttct gacatgattt
     2461 aagttgacac gatgtactat attgtatatt ctaactttcc ttgcaaatgc agaaaaacaa
     2521 ggttctgtgc atggccatgt gtttgtgggt gcatgtgttg tcataggaag tattctggta
     2581 tgtatttagg taaaaattta tgtgctagtg ttgagtttga aattataaca tgtagaccta
     2641 tatattcttt gtgtttattt tagagttttg aaaatataca atcctattta tattttgcat
     2701 agcgtttaac aggtactcaa actaaggcat ttgacattca tgtatcactt aatgacttcc
     2761 ttggcgacca actatattga aaaattaaga attatacaca aacctaagat taacagtttt
     2821 ccagaaatca atcttaaata gcattttaac ccatatgaag ataactgata ctgctcattt
     2881 cttgttaaat gaaaatgtca caggtttaat ataccagctt tctcaaacaa gcataatatg
     2941 ctcacacatg cttttatata tcacctggta gtctcacgtg gtttaattgt atacttgact
     3001 ctcagccagg ataattagac tcccttagta atgacaggac acagtagtgg gtttatttta
     3061 tcattctcat taacaaacat ttcttaaatg agataaagaa aggaatcaaa tcgtgctaaa
     3121 ttctcctttt tgttaaaatt gtcccgagtt ttcagttgtt tgctttatct ggagttcctt
     3181 tgttgaggta agttgtttgg gttttgtttg tttttttgtt tttttgtttt tctccttcct
     3241 cttttctaat aatttcccca aaattagtag ataagactaa ttcacttttt atgtacaata
     3301 agaatgatca ggaacaagtt ttgctgacag ctcagttata ttgtatttct tacactgtat
     3361 aaaaaggcct taaactgaat caggcattgc taagacacaa tgatgtacat caaaggtata
     3421 aagtgattac acctgatgca tgaagtctat actgagaagt ggcataggag aagtacaaga
     3481 cttaaggtac ttagaatcct atatggatca acttagacac aactttgctg tgcattgttc
     3541 ccatttaaaa atcaatccta ttacatggtt tgttaaatat taattcaatt ttatccaaaa
     3601 atcttaagaa atcctctttt ccaaacaaaa tctgtgggct ttctgcctat aatatcctag
     3661 ccactaagag gattccacct tgttatacca ttccctgaag taaaacacac acacacacac
     3721 acaaataact ttaaatcaca gattgcctta aaaggcttgc gactgtagtt catggtttac
     3781 agtaagaaga cttctagggc ttaagtggta ttaagtgtct agaatgtgag tttggcacaa
     3841 atcatgaagg ttatagttct acttttctca gtcttgcatc cttcagggaa ctttttctac
     3901 cacaggagag tagcctagac acttttccac tagaggagag aaaacactgg aaaaggggtt
     3961 ccttggggca tgaaatgata acccaaaacc attgctgtgg tcatgtctgt ttcttggtgt
     4021 ccctgaatcc caggcagcct gagaacaatc tgtagcccct gtcttcatgt tcaaatctga
     4081 gtgttgaggt ctcctttaaa gatggaaaaa atcctgatct catcccaaaa ataataaaga
     4141 aagatttcca gc
//
