LOCUS       NM_001106837            1600 bp    mRNA    linear   ROD 27-JUL-2024
DEFINITION  Rattus norvegicus KH domain containing 3, subcortical maternal
            complex member (Khdc3), mRNA.
ACCESSION   NM_001106837 XM_001053599 XM_236398
VERSION     NM_001106837.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Alazami,A.M., Awad,S.M., Coskun,S., Al-Hassan,S., Hijazi,H.,
            Abdulwahab,F.M., Poizat,C. and Alkuraya,F.S.
  TITLE     TLE6 mutation causes the earliest known human embryonic lethality
  JOURNAL   Genome Biol 16, 240 (2015)
   PUBMED   26537248
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Zheng,P. and Dean,J.
  TITLE     Role of Filia, a maternal effect gene, in maintaining euploidy
            during cleavage-stage mouse embryogenesis
  JOURNAL   Proc Natl Acad Sci U S A 106 (18), 7473-7478 (2009)
   PUBMED   19376971
REFERENCE   3  (bases 1 to 1600)
  AUTHORS   Li,L., Baibakov,B. and Dean,J.
  TITLE     A subcortical maternal complex essential for preimplantation mouse
            embryogenesis
  JOURNAL   Dev Cell 15 (3), 416-425 (2008)
   PUBMED   18804437
REFERENCE   4  (bases 1 to 1600)
  AUTHORS   Ohsugi,M., Zheng,P., Baibakov,B., Li,L. and Dean,J.
  TITLE     Maternally derived FILIA-MATER complex localizes asymmetrically in
            cleavage-stage mouse embryos
  JOURNAL   Development 135 (2), 259-269 (2008)
   PUBMED   18057100
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474041.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_236398.2, XM_001053599.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06621351,
                              SAMN06680416 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1600
                     /gene="Khdc3"
                     /gene_synonym="Ecat1; RGD1311617"
                     /note="KH domain containing 3, subcortical maternal
                     complex member"
                     /db_xref="GeneID:300826"
                     /db_xref="RGD:1311617"
     exon            1..208
                     /gene="Khdc3"
                     /gene_synonym="Ecat1; RGD1311617"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..1347
                     /gene="Khdc3"
                     /gene_synonym="Ecat1; RGD1311617"
                     /note="protein Filia; ES cell-associated transcript 1
                     protein; ES cell associated transcript 1"
                     /codon_start=1
                     /product="KH domain-containing protein 3"
                     /protein_id="NP_001100307.1"
                     /db_xref="GeneID:300826"
                     /db_xref="RGD:1311617"
                     /translation="MATLKTFRTLVQLKHKLGKAYEIVGEPRLPKWFHVEYLEDPKKM
                     YVEPTLVEIMFGKDGEHIPHVECTLHVLIHVNVWGPEKQAEILIFGPPNFQKDVAQML
                     SNVAHFCRMKLMEKEALEAGVERRLMAASKATTQPTPVKVRDAATQVAPVQVRDAAIQ
                     PAPVKVRDAATQVAPVQVHEVATQPVPVQVRDAATQPVPVRVRDAATQPVPVRVRDAA
                     TQPVPVRVRDAATQPVPVRVRDAATEPVPVQVRDAATQPAPVQVRDAATQPAPVQVRD
                     AATQPAPVQVRDAATQPAPVQVRDAATQPAPVQVRDAATQPAPVQVRDAATQPAPVQV
                     REAATQQTPVEVADDTQLVQLKAGEAFAQHTSGKVHQDVNGQSPIEVCEGATQRHSVD
                     ASEALSQKCPEDLEGGDTETSLDDSYVIIRPSRAVWEPFVML"
     exon            209..388
                     /gene="Khdc3"
                     /gene_synonym="Ecat1; RGD1311617"
                     /inference="alignment:Splign:2.1.0"
     exon            389..1600
                     /gene="Khdc3"
                     /gene_synonym="Ecat1; RGD1311617"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttctttgatt ttgcggttgg gtaggctttc gactggtaca gtatggccac tctgaagacg
       61 tttcggacgc tcgttcagct gaagcacaaa ctaggtaaag cctatgaaat tgtcggagag
      121 cccaggctgc ccaagtggtt ccatgtcgag tacctggaag atccaaaaaa aatgtacgtg
      181 gaacctacgc tagtggaaat catgtttgga aaggacggag agcacatccc gcatgttgag
      241 tgtacgttgc atgtcctgat tcacgtgaac gtctggggcc ccgaaaagca agctgagatt
      301 ttgatattcg gaccgcctaa ttttcaaaag gacgtggctc agatgctttc taacgtggct
      361 cacttctgcc gcatgaagtt gatggaaaag gaggctctgg aggctggagt tgagcgtcgt
      421 cttatggccg ccagtaaggc gaccacccag ccgactcccg tgaaggtccg cgacgctgcc
      481 acccaggtgg ctccggtgca ggtccgcgac gctgccatcc agccggctcc cgtgaaggtc
      541 cgcgacgctg ccacccaggt ggctccggtg caggtccacg aggtagccac ccagcccgtt
      601 cccgtgcagg tccgcgacgc tgccacccag cccgttcccg tgcgggtccg cgacgctgcc
      661 acccagcccg ttcccgtgcg ggtccgcgac gctgccaccc agcccgttcc cgtgcgggtc
      721 cgcgacgctg ccacccagcc cgttcccgtg cgggtccgcg acgctgccac cgagcccgtt
      781 cccgtgcagg tccgcgacgc tgccactcag cccgctcccg tgcaggtccg cgacgctgcc
      841 acccagccgg ctccggtgca ggtccgcgac gctgccaccc agccggctcc ggtgcaggtc
      901 cgcgacgctg ccacccagcc ggctccggtg caggtccgcg acgctgccac ccagccggct
      961 ccggtgcagg tccgcgacgc tgccacccag ccggctccgg tgcaggtccg cgacgctgcc
     1021 actcagccgg ccccggtgca ggtccgtgag gctgccacgc agcagactcc cgtggaggtc
     1081 gctgatgata cccagttggt tcagttgaag gctggtgaag ccttcgccca gcacacttca
     1141 gggaaagtcc accaggatgt caatgggcag tctcccattg aagtctgtga gggtgccacc
     1201 cagcggcatt ctgtagatgc ctctgaggcc ttgtcccaga agtgtcctga ggatcttgag
     1261 gggggggata ccgagacttc cttggatgac agctatgtca taattcgccc ttcaagagct
     1321 gtctgggaac cctttgtcat gttataaatg catctctggt gtgagccaag ataaatggca
     1381 cacacctgca aatccagaac ctagaggcag ggcgttagcc tggggctgag taaggccagt
     1441 ggtcttaaac ctcagcctgc ctaagactga ctcccttcat ctttctttct ggttgttttt
     1501 accctaggaa ttgggaagaa cggagtagag cggttttgtt tcccccttgt gttacatgtt
     1561 tgcaaacaat ttagagtatt ggaataaaaa ttgcatgcct
//
