LOCUS       NM_001408803            2743 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus lysine (K)-specific demethylase 4D-like 2
            (Kdm4dl2), mRNA.
ACCESSION   NM_001408803 XM_008765998
VERSION     NM_001408803.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jun 27, 2022 this sequence version replaced XM_008765998.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2801988.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-897               JAXUCZ010000008.1  19559942-19560838   c
            898-1075            JAXUCZ010000008.1  19557668-19557845   c
            1076-2743           JAXUCZ010000008.1  19551045-19552712   c
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q12"
     gene            1..2743
                     /gene="Kdm4dl2"
                     /gene_synonym="Kdm4dl; RGD1563367"
                     /note="lysine (K)-specific demethylase 4D-like 2"
                     /db_xref="GeneID:500944"
                     /db_xref="RGD:1563367"
     exon            1..897
                     /gene="Kdm4dl2"
                     /gene_synonym="Kdm4dl; RGD1563367"
                     /inference="alignment:Splign:2.1.0"
     exon            898..1075
                     /gene="Kdm4dl2"
                     /gene_synonym="Kdm4dl; RGD1563367"
                     /inference="alignment:Splign:2.1.0"
     exon            1076..2743
                     /gene="Kdm4dl2"
                     /gene_synonym="Kdm4dl; RGD1563367"
                     /inference="alignment:Splign:2.1.0"
     CDS             1247..2629
                     /gene="Kdm4dl2"
                     /gene_synonym="Kdm4dl; RGD1563367"
                     /note="lysine-specific demethylase 4D-like"
                     /codon_start=1
                     /product="lysine (K)-specific demethylase 4D-like 2"
                     /protein_id="NP_001395732.1"
                     /db_xref="GeneID:500944"
                     /db_xref="RGD:1563367"
                     /translation="MTNLEQDVSQNPGCSIMTFCPTMEEFSDFCKYIAYMESQGAHRA
                     GVAKVIPPKDWKRRQSYEDVMDMSIPAPLQQVVSGKAGVFTQYHKKKKAMTVGKYREL
                     AESKQYQTPPHLDFEDLERKYWKNRLFGSPIYGADVSGSLFDENTQHWNVGHLGSLLD
                     VLKQDRGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGQPKTWYAVPPEHG
                     RRLELLAKELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYG
                     YHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEARVSFSMDAFEGLLQPEPYEMW
                     KQQGNQRAMDPLALTSGPRQELTLGIDQLKPDSKQNGSHSGPRRNWLRRGQKSCPYRK
                     VHAESPCPPTGKLLAPRSVPQGTRCSKQASGSSKTPAICADVLAVNHSQACRILDRSL
                     IVSLPLQDLN"
ORIGIN      
        1 tctgggagtg tgtgagtgtg tgtgtgagta tgtgtgagtg tgtgtgtgtg tgtgtgtgtg
       61 tgagtgtgtc tgggagtgtg tgagccaggc tggatgccag tgtggagggc agaggatatt
      121 ggctggagtt gggtctccgt gtgccatgtg gtccctagga attccactca tgaaaagact
      181 tcgaggccag cgtctttctc acttagccat ctcatctgcc caatgccttc tcacttcctt
      241 gtgaagcaaa ttcatgtggg tgtcctaaga taccacccca cacagtccct ttcttccctc
      301 tgtgcctgga cacaaatgaa ctccttctgt ttctaggaga acaatctcta tgctccctgg
      361 cagtctcagg tctgtgctga ttctgcagat agaatttggt gctctcaccc tgccttttct
      421 acaacttggc ctcagaaagg cctcccttac tttgcagcct tccaggatga agtggccccg
      481 ggccttctct ccatccatgt ctgatagtaa aatctatgga ggatcagcaa ggtggatcag
      541 aaggttaaaa tacttgcctc acaaggctaa gaactatcaa ccctcagaaa caatggcgga
      601 aggaaaaacc atcttcccaa aatggcaccc acccaaaata cagtctcccc tacccttcca
      661 ccccccacat atacaccatc accacctcat acacctacct acctacacac acacacacct
      721 acatgccccc ccaacctggg tacctataca aatactaata tttatctcag tgtgacagcc
      781 caagccttta atcccagctc tcagaagcag aggcaggcct gtattgataa gccagcctgt
      841 tctacacagt aacctcctgc gaagactaca tagatcctgt ctggaaaaac agaaaatgtc
      901 ctgctcaaac tgtctagtta gtttggaaag cttcggaaga ggcacatata gacaaatcat
      961 gagtaccctg ccagccaacc agcctcagat gtccagtaat actgctgttg tccagatgag
     1021 ctgacacaga agagagcagc aggtgtctgc taatggagga aacacaggac taaaggaaac
     1081 caaagagaag gagtaaaagg aggagattaa ggacagataa gagtgaagaa aatcccacgg
     1141 gagcctggaa agaggtactc agagacagac agaaagatcc ctctgagagg cctgaagacc
     1201 caggggcagc caggatccca gactgagctc ttgaattgct gtggccatga caaaccttga
     1261 acaggatgtg tcccagaacc caggctgtag catcatgacc ttctgcccaa ccatggaaga
     1321 attctccgac ttctgcaaat acattgccta catggagtcc caaggtgcac acagagctgg
     1381 ggtggccaag gtcatcccgc ccaaggactg gaagcgaaga cagtcctatg aggatgtcat
     1441 ggacatgtcg attcctgctc ctctgcagca agtggtctct gggaaggcag gtgtgttcac
     1501 ccaataccat aagaagaaga aagccatgac agtggggaag tatcgtgagc tggccgagag
     1561 caaacaatac cagaccccac cacacctgga ttttgaagat ttggagagaa aatactggaa
     1621 gaatcgcctg tttggatcac caatttatgg tgctgacgtc agcggctctc tgtttgatga
     1681 gaacactcaa cattggaacg tgggccacct tggaagcctt ttggatgtgc tgaagcagga
     1741 ccgcggcata gtgattgagg gcgtcaacac gccctacctg tattttggca tgtggaagac
     1801 ctcctttgcg tggcacacgg aggacatgga cctgtacagt atcaactacc tgcactttgg
     1861 acagcccaag acctggtatg ctgtaccccc tgagcatggc aggcgcctgg agctcctagc
     1921 caaggaactc ttcccaggca gctcccaggg ctgccaggcc ttcctgaggc acaaggtggc
     1981 gctcatctca cccactgtgc tcaaggagaa tggcatcccc tttggtcgaa tcacccagga
     2041 ggctggggag ttcatggtca cctttcccta tggctaccac gcgggcttca accatggctt
     2101 caactgtgca gaagccatca atttcgccac gccgaggtgg attgactatg gcaaggtggc
     2161 atctcagtgc agctgtgggg aggccagggt gagcttctcc atggatgcct ttgagggcct
     2221 cctgcagcct gagccatatg agatgtggaa acagcaaggg aatcaaagag ctatggaccc
     2281 cctggcgctc acctcaggtc ccagacagga actgaccctc gggatcgatc agctgaaacc
     2341 cgattcgaag cagaatggtt cccattcagg acctcgcagg aactggttga ggagaggcca
     2401 gaaaagctgt ccatacagaa aggtgcatgc agaatcccca tgccctccca cgggcaagct
     2461 tttggctcct cgatctgttc cccaagggac aagatgctcc aagcaggcat ctggatcctc
     2521 caagacacct gccatttgtg ctgatgttct agctgtgaac cactcacagg cctgtaggat
     2581 cttggatagg agcctcatag tctccctgcc gcttcaggac ttgaactaag ttcattcaga
     2641 tctcgtgcac acgcaccccc gacacaccca cacacacaca cacacacaca cacacacaca
     2701 cacacacaca cacaatctga ggccgtttgg ctaccagtgg aca
//
