LOCUS       XP_038953204            1762 aa            linear   ROD 11-JUN-2023
DEFINITION  lysine-specific demethylase 3B isoform X1 [Rattus norvegicus].
ACCESSION   XP_038953204
VERSION     XP_038953204.1
DBLINK      BioProject: PRJNA677964
DBSOURCE    REFSEQ: accession XM_039097276.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 25, 2024 this sequence was replaced by
            NP_001414398.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     Protein         1..1762
                     /product="lysine-specific demethylase 3B isoform X1"
                     /calculated_mol_wt=191051
     Region          1503..1575
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1600..1705
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..1762
                     /gene="Kdm3b"
                     /coded_by="XM_039097276.1:819..6107"
                     /db_xref="GeneID:682469"
                     /db_xref="RGD:1583423"
ORIGIN      
        1 madaaaspvg krllllfadp tasasasapt aaaavsgdpg palrtrawra gtvramsgav
       61 pqdlaifvef dgcnwkqhaw vkvhaeevla lllegslvwa prkdpvllqg trvpvaqwpa
      121 ltftplvdkl glgsvvpvey lvdrelrfms danglhlfqm gtdvqnqill ehaalretvn
      181 alvsdqklqe ifsrgpysvq ghrvkvyqpe geeawlcgvv srqdsisrlm evsisetgei
      241 ksvdprlihv mlmdnstpqs eggtikavks skgkkkresi egrdgrrrks asdsgcdpat
      301 kklkgdrgev dsngsdggea srgpwkggna sgepgleqra kqppstfapq inrsirfaty
      361 tkengrtlvv qdepvggdrp vpftpyasat gqtplapevg gaenkeagkt leqvsqgmva
      421 saavvtttss tpttvrisdt glasgtgpek qkgswsqasg essrssslas sgfgvslssl
      481 sqpltfgsgr sqsngvlate nkplgfslsr ssasesqkds dlsknlffqc msqnlpssny
      541 ftsgsegvad dsssrdsfrq sleslssglg kgrpvlgadt kpgpkagssv drkvpaesmp
      601 tltpafprsl lntrtpenhe nlflqppkls reepsnpfla fvekvehspf ssfasqasgs
      661 sssattvtsk atpswpeshs sadsaslakk kplfittdss klvsgvlgsa lstggpslsa
      721 mgngrssspt ssltqpiemp tlssspteer ptvgpgqqdn pllktfstvf grhagsflss
      781 paefaqenka pfeavkrfsl derslacrqd sdsstnsdls dlsdseeqlq aksglkgppe
      841 hlmgklgpdg grsaelllgk gkgkqapkgr prtaplkvgq svlkdvskvr klkqsgepfl
      901 qdgscinvap hlhkcrecrl eryrkfkeqe qddstvacrf fhfrrlvftr kgvlrvegfl
      961 spqqsdpdam nlwipsssla egidletsky ilanvgdqfc qlvmsekeam mmvephqkva
     1021 wkravrgvre mcdvcettlf nihwvcrkcg fgvcldcyrl rksrprsete emgdeevfsw
     1081 lkcakgqshe penlmptqii pgtalynigd mvhaargkwg ikancpcisr qsksvlrpav
     1141 tngisqlpsi tpsassgnet tfssgggtva ttnpepeqap kgagadsrae eplkaegsas
     1201 nsnselkair ppcpdtapps salhwladla tqkakeetkd agslrsvlsk eshspfglds
     1261 lnstakgspl tpklfnslll gptasnskte gsslrdllhs gpgklpqtpl dtgipfppvf
     1321 ssssagaksk aslpnfldhi iasvvenkkt sdsskrscnl tdtqkevkem vmglnvldph
     1381 tshswlcdgr llclhdpsnk nnwkifrecw kqgqpvlvsg vhkklkselw kpeafsqefg
     1441 dqdvdlvncr ncaiisdvkv rdfwdgfeii ckrlrsedgq pmvlklkdwp pgedfrdmmp
     1501 trfedlmenl plpeytkrdg rlnlasrlps yfvrpdlgpk mynayglita edrrvgttnl
     1561 hldvsdavnv mvyvgipige gahdeevlrt idegdadevt kqrihdgkek pgalwhiyaa
     1621 kdaekirell rkvgeeqgqe nppdhdpihd qswyldqilr krlfeeygvq gwaivqflgd
     1681 avfipagaph qvhnlyscik vaedfvspeh vkhcfrltqe frhlsnthtn hedklqvkni
     1741 iyhavkdavg tlkaheskla rs
//
