LOCUS       NM_001105768            2473 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus potassium channel tetramerization domain
            containing 5 (Kctd5), mRNA.
ACCESSION   NM_001105768 XM_001057031 XM_220224
VERSION     NM_001105768.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Smaldone,G., Pirone,L., Pedone,E., Marlovits,T., Vitagliano,L. and
            Ciccarelli,L.
  TITLE     The BTB domains of the potassium channel tetramerization domain
            proteins prevalently assume pentameric states
  JOURNAL   FEBS Lett 590 (11), 1663-1671 (2016)
   PUBMED   27152988
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Ahmed,S.M., Theriault,B.L., Uppalapati,M., Chiu,C.W., Gallie,B.L.,
            Sidhu,S.S. and Angers,S.
  TITLE     KIF14 negatively regulates Rap1a-Radil signaling during breast
            cancer progression
  JOURNAL   J Cell Biol 199 (6), 951-967 (2012)
   PUBMED   23209302
REFERENCE   3  (bases 1 to 2473)
  AUTHORS   Bayon,Y., Trinidad,A.G., de la Puerta,M.L., Del Carmen
            Rodriguez,M., Bogetz,J., Rojas,A., De Pereda,J.M., Rahmouni,S.,
            Williams,S., Matsuzawa,S., Reed,J.C., Crespo,M.S., Mustelin,T. and
            Alonso,A.
  TITLE     KCTD5, a putative substrate adaptor for cullin3 ubiquitin ligases
  JOURNAL   FEBS J 275 (15), 3900-3910 (2008)
   PUBMED   18573101
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_001057031.1, XM_220224.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168712.1, CK366160.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676810 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..2473
                     /gene="Kctd5"
                     /note="potassium channel tetramerization domain containing
                     5"
                     /db_xref="GeneID:287109"
                     /db_xref="RGD:1304990"
     exon            1..268
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..721
                     /gene="Kctd5"
                     /note="potassium channel tetramerisation domain containing
                     5"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD5"
                     /protein_id="NP_001099238.1"
                     /db_xref="GeneID:287109"
                     /db_xref="RGD:1304990"
                     /translation="MAENHCELLPPAPSGLGAGLGGGLCRRCSAGIGALAQRPSGVSK
                     WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPV
                     LNYLRHGKLVINRDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQMPVKHVYRV
                     LQCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTS
                     EPSEKAKILQERGSRM"
     exon            269..377
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
     exon            378..469
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
     exon            470..565
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
     exon            566..691
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
     exon            692..2473
                     /gene="Kctd5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggcttgtt aggatcatgg cggagaatca ctgcgagctg ctaccgccgg ctccgagcgg
       61 cctcggggcg gggctggggg gcggcctgtg ccgccgctgc agcgctggga tcggcgccct
      121 ggctcagcgc cccagtggcg tgtccaagtg ggtccgtctc aacgtcggcg gcacctactt
      181 cctcaccacc cggcagacgc tgtgccggga cccgaagtct ttcctgtacc gcttgtgcca
      241 ggcggacccc gacctagatt cggacaagga tgaaacgggc gcctacttaa tcgacagaga
      301 ccccacctac tttgggcctg tgctgaacta cctgagacac gggaagttgg ttattaacag
      361 agacctcgca gaggaaggag tgttggagga agcagaattt tacaatatca cctcactaat
      421 aaaacttgta aaggacaaaa ttagagaacg agacagcaaa acatcccaga tgccagtgaa
      481 gcacgtgtac cgtgtgctgc agtgccagga ggaggagctc acacagatgg tgtccaccat
      541 gtcagacggc tggaagtttg agcagctggt cagcattggc tcctcttaca actatggaaa
      601 tgaagatcag gctgagttcc tctgcgtggt ttccaaggag ctgcacaaca ccccgtatgg
      661 cacaaccagt gaaccaagtg agaaagccaa gattttgcaa gaacggggct caaggatgtg
      721 aggaatgctg acagctgaag aaatgatttt cttttcccca agataaagtg agccgccatg
      781 tgcagaaagc atggctgtga gaagaaacct gcttttgatc atttctctag agatctgggt
      841 gtggatcctt ttttgcctca gatgtgggtg gcgagagaca gcccagctgt caagccagtc
      901 gtccccaccg ggagggaggc agctagggct gggtcggcag tctctctggt ctcactgttc
      961 tttctgagtg ctacgtggga ctgaggcagg atgctgctga ccagcccgtg cattcctgaa
     1021 gatgatttga aggacagggt ccttggtgct acacacagtc tgcaacaagc agcctgggcc
     1081 ttgccaggag ggaggagcag tagccgcaac tcctgtccag tgcactgtgg cttggggggt
     1141 gggtgccgct caccactatt gagcaagagg cccacatcct tgagtcaggg aggctgctct
     1201 gcctccacgc atgattggtt gatttctctc gacctcggct gaggctcctg acaaaggcag
     1261 tctccacgtt atcactactt ctgggcacct ccctggactg gacttcttca gagccaggct
     1321 cttgttctgg cctgtcagct tggcccgggg tcatcaaggc ttcttaattt gtattttcca
     1381 ggcaagagga ctttgtatcc cttttttaaa gtgtggatag accacccggt gtttatactc
     1441 tttagaaatg cctaaaaagt gttgctacgt tttggattga tctgttaaat cctttatggg
     1501 agggagatag aggttttgcc tcagatgtct cacctgcggg ctcatggggg agctggcgcc
     1561 taccagtgcc tttgttgtgc ctgggatgga ggctggggcg ggaggcctgt ccacctggct
     1621 tctggagctg acactccagg tcacgtggac actccaggat gtttacagtg caaacatgtc
     1681 tccttctcac tggctctcac ttcctcgtat aactatgcag ttcttctctc gtatttctgg
     1741 agtgtttggg actttgcaca acctgcatgg gctctgttta tctgatacga cattggagct
     1801 gctaaggttc ctgcagaggc tgcgcctgct ggcttgaaac agacctttct caactggtta
     1861 ggggattgta gcaggccaca cacttggccc aagcaagcaa gctctgtgct tcttgacccc
     1921 tggcttccca agggagctgt gcaaactgac cgccatggct gcccatgtgc acgccagggc
     1981 ctctaacact gcttgtttca aatgcttccg gaaatttctt gcctagaccc tcttccttct
     2041 cttccgccag taactgatta atcaagttct ccagcgtcta ggactgacct cttcctttcc
     2101 taagatctgt tgtctgttgt taaatgtttg gcttaatgat tcataaaaac ttgtctctgg
     2161 ggttggttga gccttggcag ccctgtcctc cccagcatac tctggggcag tagctctgtt
     2221 gttggccgtg ggaaatattc tggggagtcg ctggacactt agcattgttt ggtttatgat
     2281 tctgacaata gataggcttg tgggattttt gtttctgttt ttttttttaa tttaatgata
     2341 ttaaaactta attcactaaa attctaaggg gatatttata cttttatact tttttaggta
     2401 tccgtatttt atcagcttac tgtttaatgc ctaagtttcc cctggaaaga gtaaataaaa
     2461 ttgtgtattt atg
//
