LOCUS       XM_008768411            1865 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium channel tetramerization
            domain containing 2 (Kctd2), mRNA.
ACCESSION   XM_008768411
VERSION     XM_008768411.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 1, 2024 this sequence was replaced by
            NM_001427653.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008768411.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1865
                     /gene="Kctd2"
                     /note="potassium channel tetramerization domain containing
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 20 ESTs, 3 long SRA reads, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 243 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:498024"
                     /db_xref="RGD:1566063"
     CDS             128..919
                     /gene="Kctd2"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD2"
                     /protein_id="XP_008766633.1"
                     /db_xref="GeneID:498024"
                     /db_xref="RGD:1566063"
                     /translation="MAELQLDPAMAGLGGGGGSVVGDGGGSGRGPPSPRPAGPTPRGH
                     GRQPAAVAQTLEPGPGPPERTGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFLCRLC
                     CQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFYNI
                     ASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGS
                     SYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM"
ORIGIN      
        1 agggtctctg ctagttgggg gcgctcccgt cccttacccc ctgccccacc cccgccgatg
       61 ggctggcccg gctctccctg ccgaggaatg ggccggcccg gcggcgggcg ggcagcggcg
      121 gcccaagatg gcggagctgc agctggaccc ggcaatggcg gggctgggag ggggtggcgg
      181 gagtgtggtg ggcgatgggg gcggctcggg ccggggacct cccagcccac gccctgccgg
      241 ccccacaccc cggggacacg gccgtcagcc tgctgccgtc gcgcagacac tggagcccgg
      301 ccccggacct ccggagcgga cggggggcgg cggggcagcc cgctgggtcc gtctcaacgt
      361 gggcggtacc tacttcgtga ccaccagaca gaccctaggc cgggagccca agtccttcct
      421 ctgccgcctg tgctgccagg aggacccgga gctggactcg gacaaggatg agactggagc
      481 gtatctgatt gacagagacc ctacctactt tggtcctatc ctaaactacc tccgccatgg
      541 aaaactcatc attaccaagg agttggcaga agaaggtgtg ctggaagaag cagagtttta
      601 caatatcgcg tctctcgtgc ggctggttaa ggaaaggata cgggacaacg agaacagaac
      661 ttcacaaggc cccgtgaagc acgtgtaccg agtcctccag tgtcaagagg aagagctcac
      721 tcagatggtc tccaccatgt ctgatggctg gaaatttgaa cagttaatca gcattggctc
      781 ctcctataac tatggaaacg aagaccaggc agaattcctc tgtgttgtct ccagagaact
      841 aaataattct accaatggca tcgtcataga gccaagcgaa aaggccaaga ttcttcagga
      901 gagaggctct cgaatgtaaa cagagaatca gaagttttgg atccctgaag gacgagagca
      961 atcagccaag cagctgcgac gggcggccct gcacctgtac agtaactgag ccactgcaaa
     1021 gaacagctgc gcctggcccc gagaagcggc gtccggccac actggaggag ccccccgcct
     1081 ggacgaagac agtgcgcctc tggcctcatg gccccttttc agaaacctgc tcctgtttcc
     1141 tagccagtgc tagagcagac ctcacaacag cctctgggtc gggtccctgg ctggagcctt
     1201 gtggggagct gggggaaagg gaggaaggtc tagctccctg gaacagtcta gatgctaaaa
     1261 gccggagcag aggaagaagg ctgtccggag ccgagccctg gtctcagcct gccggtgcca
     1321 tgatggacat cagcagctgc atggactgtt cttccctgac taggcttctt tgaggttggc
     1381 agggattccg tgttagtgtg ttggaccgag ggtttggtac agaataaagc ggccaaagga
     1441 ccacaatccc atgaccaggg cctcagaggc aggaggataa ggtgtcctgg ctgtggttgg
     1501 agcatgggag ttgctgttcc cattgccttg agtggcatca cccggtgtct ctcacagccg
     1561 ggcccctcat agcccaccct cacccaggag gtttgaggct gcggcgtcct cagccgtgct
     1621 agatggacag cagcactaag cagttggtgt gattgcttct gcagcctttt cttacctggt
     1681 cgaccccgtc ttcctccccc agcttcttgg actggaccaa agagaaagga ctttgtggac
     1741 cctctgtgat ggcttggggt gaggaaggct atttctatgg acgctgccaa atgtctcatg
     1801 ttgtcatagc taaaagtggt ggtgtttttg tgattgtctc ttgaactgca ctgactgcta
     1861 ggtga
//
