LOCUS       XM_006241978            1004 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium channel tetramerization
            domain containing 17 (Kctd17), transcript variant X10, mRNA.
ACCESSION   XM_006241978
VERSION     XM_006241978.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006241978.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006241978.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1004
                     /gene="Kctd17"
                     /gene_synonym="RGD1311154"
                     /note="potassium channel tetramerization domain containing
                     17; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 70 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:300317"
                     /db_xref="RGD:1311154"
     CDS             25..858
                     /gene="Kctd17"
                     /gene_synonym="RGD1311154"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD17 isoform
                     X9"
                     /protein_id="XP_006242040.2"
                     /db_xref="GeneID:300317"
                     /db_xref="RGD:1311154"
                     /translation="MQTPRPAMRMEAGEAAPPVGAGGRSGGGWGKWVRLNVGGTVFLT
                     TRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKD
                     MAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVST
                     MSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELHSSPHGLSSESTRKTKPCHLRIP
                     LTFSPSHHRLLLLRFLLEVLLHLHPPPLPPGSHLHPASSLSAPAQVSSPPAPVSTLGL
                     P"
ORIGIN      
        1 cgcccgctgc gtgcggaggg aaggatgcag acaccgcggc cggcgatgag gatggaggcc
       61 ggggaggcag cgccaccggt gggggcgggc ggccgctctg ggggcggctg gggcaagtgg
      121 gtgcggctga atgtgggggg cacggtgttc ctgaccaccc gccagacgct gtgccgggag
      181 cagaagtcct tcctcagccg cctgtgccaa ggcgaagagc tgcaatcgga cagggatgag
      241 accggggcct acctcattga ccgtgacccc acctacttcg ggcccatatt gaacttcctc
      301 aggcatggca aattggtgct ggacaaggac atggctgagg agggggtcct ggaggaagct
      361 gagttctaca acatcggtcc tctgattcga atcatcaaag acaggatgga ggaaaaagac
      421 tacacagtga cccaggtgcc acccaagcac gtgtaccgag tgctgcagtg ccaggaggag
      481 gaactcacac agatggtctc cactatgtcc gatggctggc gcttcgagca gctggtgaac
      541 atcggttcct cctacaacta tgggagtgag gaccaggccg agttcctgtg tgtggtgtct
      601 aaggaactcc acagctcccc ccacggcctg agttcggagt ccactcgcaa gaccaagccc
      661 tgtcatctca ggatcccgct aaccttttct ccctcccacc accgcctcct cctcctccgc
      721 ttcctgctgg aggtcctgct tcatcttcat ccacctcctc ttcctcctgg atctcatctg
      781 caccctgcct cttccctctc tgcccctgcc caggtttcct ctccgcctgc tcccgtctcc
      841 accctggggc taccctagtc ccagtctccc gtgccctctc cccaggcccc ctagccctgc
      901 atccccaagc atcctgcctg ccgcctcctt ctccccttcc ggcccctcct gcctcctggc
      961 ctggggagga ggggcgtggc cgcatctgct ctatgtcctc caac
//
