LOCUS       NM_001172155            1393 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus potassium channel tetramerization domain
            containing 16 (Kctd16), mRNA.
ACCESSION   NM_001172155
VERSION     NM_001172155.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Schwenk,J., Metz,M., Zolles,G., Turecek,R., Fritzius,T., Bildl,W.,
            Tarusawa,E., Kulik,A., Unger,A., Ivankova,K., Seddik,R., Tiao,J.Y.,
            Rajalu,M., Trojanova,J., Rohde,V., Gassmann,M., Schulte,U.,
            Fakler,B. and Bettler,B.
  TITLE     Native GABA(B) receptors are heteromultimers with a family of
            auxiliary subunits
  JOURNAL   Nature 465 (7295), 231-235 (2010)
   PUBMED   20400944
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212362.1, SRR22582416.1499370.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-832               JAXUCZ010000018.1  32419424-32420255
            833-1393            JAXUCZ010000018.1  32711368-32711928
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p11"
     gene            1..1393
                     /gene="Kctd16"
                     /gene_synonym="RGD1559856"
                     /note="potassium channel tetramerization domain containing
                     16"
                     /db_xref="GeneID:291618"
                     /db_xref="RGD:1559856"
     CDS             1..1284
                     /gene="Kctd16"
                     /gene_synonym="RGD1559856"
                     /note="potassium channel tetramerisation domain containing
                     16"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD16"
                     /protein_id="NP_001165626.1"
                     /db_xref="GeneID:291618"
                     /db_xref="RGD:1559856"
                     /translation="MALSGNCSRYYPRDQGAAVPNSFPEVIELNVGGQVYFTRHSTLI
                     SIPHSLLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPE
                     RGRLKREAEYFQLPDLVKLLAPEEVKQSPDEFCHSDFEDASQGSDTRICPPSSLLPHD
                     RKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRA
                     PERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTEDKIWSSYTEYVF
                     YREPSRWSSSHCDCCCKNGKGDKGESGTSCNDLSTSSCDSQSEASSPQETVICGPVTR
                     QGNIQTLDRPIKKGPVQLIQQSEMRRKSDLLRTLTSGSRESNISSKKKAAKEKVSIEE
                     ELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL"
     exon            1..832
                     /gene="Kctd16"
                     /gene_synonym="RGD1559856"
                     /inference="alignment:Splign:2.1.0"
     exon            833..1393
                     /gene="Kctd16"
                     /gene_synonym="RGD1559856"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctctga gtgggaactg tagccgttat tatcctcggg accaaggggc tgctgttccc
       61 aactctttcc ctgaagtcat agagctgaat gttgggggcc aggtttactt tactcgccat
      121 tccacattaa taagtatccc ccattctctc ctgtggaaaa tgttttcccc aaagagagac
      181 actgctaacg atctagccaa ggactccaag ggaaggtttt tcatcgacag agatggcttt
      241 ctgttccgtt atattctgga ctatctcagg gacaggcagg tggtcctgcc tgatcacttt
      301 ccagaaagag gaaggctgaa aagagaagct gagtatttcc agctccctga cctcgtcaaa
      361 ctcctggccc ctgaggaagt caagcaaagt ccggatgagt tctgccacag tgacttcgaa
      421 gatgcctccc aaggaagcga cacaagaatc tgccccccct cttcgctgct tcctcatgac
      481 cgaaagtggg gttttattac tgtgggttac aggggatcct gtaccttggg cagagagggg
      541 caagcagatg ccaagtttcg gagagttccc cggattttgg tttgcggaag gatttccttg
      601 gcaaaggaag tttttggtga aactttgaat gaaagtagag accccgaccg agctccagaa
      661 agatacacct ccagatttta tctcaagttc aaacatctgg aaagagcttt tgatatgttg
      721 tcagagtgtg gattccacat ggtggcctgt aactcctcgg ttacagcatc ttttgtcaac
      781 cagtatacag aagacaagat ctggtcgagc tatactgaat acgtcttcta ccgtgagccc
      841 tccaggtggt cctcctccca ttgtgattgc tgctgcaaga atggcaaggg agacaaaggg
      901 gagagtggca cttcctgcaa tgacctctct acttccagct gcgacagcca gtcagaggcc
      961 agctctcccc aggagacagt gatctgtggg cctgtaacgc gtcagggcaa catccagact
     1021 ctggaccggc ccatcaagaa aggccccgtg cagctgatcc aacagtcaga gatgaggcgg
     1081 aaaagtgacc tgctccggac tctgacttcc ggctctaggg agtcgaacat aagcagcaaa
     1141 aagaaagctg cgaaggaaaa ggtctccatc gaggaagagc tggagaaatg tatccaggat
     1201 ttcctgaaga taaaaattcc agatcgcttc cctgagagaa aacatccttg gcagtctgaa
     1261 cttttacgga agtatcatct ataggggagg gcagtgggta gtcaccactt tgaaataaac
     1321 ctcctgaaag gaagacatat attaaaggaa aaataacaac taacaatcca tatgtgttag
     1381 aacacaatgt cca
//
