LOCUS       XM_006256772            5198 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium channel tetramerisation
            domain containing 12b (Kctd12b), transcript variant X3, mRNA.
ACCESSION   XM_006256772
VERSION     XM_006256772.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256772.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256772.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5198
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5198
                     /gene="Kctd12b"
                     /note="potassium channel tetramerisation domain containing
                     12b; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 ESTs, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:681355"
                     /db_xref="RGD:1596735"
     CDS             390..1268
                     /gene="Kctd12b"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD12-like"
                     /protein_id="XP_006256834.1"
                     /db_xref="GeneID:681355"
                     /db_xref="RGD:1596735"
                     /translation="MAMPEKSSCVKPTEECSSFPEIIELNVGGQVYITRYPTLISIPG
                     SRLWEMFSVKNPCSLIQDNKGRFFIDRDGFLFRYVLDYMRDMQVVLPDHFPECGRLHR
                     EAEYFKLPELAKMLALKMNKLNSIGNDSCQIDLDELSPSIDTTFNFSSTNSIHISGPD
                     NPVVLTAAPGSELKKAGFITIGYRGSYTLGRDSQTDAKFRRVARIMVCGKISLAKEVF
                     GDTLNESRDPDRPPERYTSRYYLKFTFLEQAFDKLADAGFHMVACNSTGTCTVTHDQT
                     DDRIWTSYTEYVFYRE"
ORIGIN      
        1 tagcagggga ggagggtcta cgggactgct agttttaaag aggaaaactc aaatcaagca
       61 ccaaaacaca cagcaaggga gaggagagga agaacagaaa agctctgtgg agctgagccc
      121 tcacagcact gaggcagaca ggcactgagg ctcggcttgg cagtacctga gtggctcaag
      181 actcaaagtt tagctgttaa ctcctttctt ggaactctaa cttggagcag tataaaaggt
      241 cagaagtctg gtttctggca gtcttcgcat gccctccacc cccagctata ctatcagcat
      301 atgacagagg aacaagtaat tgtgaaaaca gagagatttc ttcagagaat tcactctgag
      361 aagaggggga cttgatatta agggtcaaca tggccatgcc agaaaagtca agttgtgtca
      421 aaccgactga ggagtgcagc agttttcctg agattattga actcaatgta ggtggccagg
      481 tgtacataac tcgctatcct actttgatca gcattcctgg ttcccggctc tgggaaatgt
      541 tcagtgtaaa gaacccttgc tcactgatcc aggacaacaa agggagattc ttcatagatc
      601 gagatggttt tctctttcgc tatgtcctag actacatgag agacatgcaa gtagtccttc
      661 cagatcactt tccagagtgt ggccgactcc atagagaagc agaatacttt aagctgccag
      721 aactagccaa gatgttggct cttaaaatga acaagctcaa ctcaattggc aatgactcat
      781 gtcagattga tctagatgag ctctcaccca gcattgacac cacgttcaat ttctcttcaa
      841 ctaatagcat tcatattagt ggccctgata atcctgtggt cctgacagct gcccctggtt
      901 ctgagctcaa gaaggctggc ttcatcacta ttggttatcg aggttcctat actctgggca
      961 gggacagcca aacagatgcc aaattccgcc gtgtggccag aatcatggta tgtggtaaga
     1021 tctcattagc caaagaagtg tttggagaca ctctgaatga gagcagagac ccagaccgcc
     1081 ctccggagcg atatacttct cgatattacc tcaaattcac tttcttggaa caagcctttg
     1141 acaaactagc tgatgctggc ttccacatgg tagcatgcaa ctccactggc acctgcactg
     1201 tcacacatga ccaaacagat gacaggatct ggacctctta cactgaatat gttttctatc
     1261 gtgagtgata cttaaagtca cccaggaaat acaaaccccc aaaccgtctc tctcctctgt
     1321 ttccatatca actgtctcct ttagaaatag atacattaat cactctaggt tccccagtgt
     1381 tctgcataat cttgaacaat gccacttctc tcatcataac cacttgaacc tttgatggtt
     1441 tagttcttat acactattgc agtccatctg tctattttct ttggactgtg gagtggcatc
     1501 agtataggta gtagactcta tttctggagt gactgctatt aaatataacc actaaattac
     1561 atgtgttgag acctattaag ctatggcttc caagttgttt ctcactcata acccacattg
     1621 aacttgatta tgtaccttat tatcatcagt attcacctac ataaagctct gtatggctgg
     1681 gctggagatt acagtaggta gtatgaatct gctttccaga tgttttacca agcttagtgg
     1741 aagacagccc tctaggaggt tcatggaaaa gtgaaccaat tctagaatta ttatggactt
     1801 ttgatagaag ctagacagac agttgtatga ctattatttc caagaataaa aggtctagca
     1861 ctcaatttgc ttttacatga aaatatagta aggaagtatt tcatagctat tacctcagtc
     1921 ataagtggct gtgccattaa aaaatactgt cctaaaatac ctttcactag aattacatac
     1981 aaacatatgt agggaagaga acaatgaaca atgttgcttg gaataagtat atacatgttt
     2041 taattagttt agtcaaataa ttagctgtac tcatccgttg ttaacttgtt tgtattggtt
     2101 gatggtgtat atgctttgct tttctggagg cgaggatggg agaagaaaga agaaaaacaa
     2161 gaaaacaact aaaacaaaac aaaacacctg agattgatca tctgattccc tgccaatgac
     2221 tttgtaatca aacaggctgg aagcaagtat tcattcgcag atgagaatgt tgggaatcta
     2281 agataaatga ctgaattgta aaagaccaag accaagccaa gaaaaagagg tctgtagggc
     2341 tcattagagc attttcctca cttctgtgaa agcaatcaag tagtcagata gacttgtcgt
     2401 tcctttattc tgcctttaac gtgcactact caccttcttt gtttgcattg ccttctaatt
     2461 ccttttctaa tcaggtcttt ttaatttcaa agaactaaaa ctcacataaa atggcttgag
     2521 aaagaaaaaa tgtgcatgtg tcagtggtgt ggctgtgtga gtattttaag ctcacattta
     2581 ttttactttt tctgttgcat ctaaaggaaa tgtagacgga ttagtctcag agggtctggg
     2641 gagctgtcaa taattgatat tctatctttt ctttcaaagg ccatatgatt ttcctttggt
     2701 catctccaaa gctcactgat tccatatttc tccaggccat tcactttctt ccttacaatt
     2761 tataggagac ctaaacagta atccagcctt tcactgaaca tcaactccca ggaaacttct
     2821 ccacacttca cttcttttgt cgttaatccc cttgtctaaa tccaaatcag ctatgatgta
     2881 ggacagaaag gctgagtggt tggcagctct gtggcttgga cagacagtta ttccaattac
     2941 tacatggatt atcacataga aggtatacaa tcttacgtag tctttcagta tagcacttca
     3001 gataccctct ggtcactaac tcctttagag gtcagttgaa tacagaagtt gagacgcagg
     3061 acattttata tgctcttaaa gagatgttcc ttcaaacagc ttatgtgaca ttcaggattg
     3121 ttgtcattgc cgtactcgtc ctatgaagtt tagtctttac gtttgcttac ttattcattg
     3181 gtacatttac tagctttagc ctctcttgtg tgtttttagt attaacaaag tctcaattgc
     3241 ccatctgccc agtagagaag tggtcaccat gtatttaagg tggtgaatat attgcatagt
     3301 accgaaagtg aagatgctgt gctttggtaa cttactatgt gatgcagttg tctacagttt
     3361 gatctttcag aaatagggct aactgtttta aactgaggac ttgtaatact gttttttttt
     3421 ttatactctg tcatcaattt acattattct tggtttaata ttatttctga aacacttgtc
     3481 atttgctctt caaatacttt tcactcacaa ataatttaat ggaggaaata ataggaagaa
     3541 ctataacatc tcttggggtt gttgtgttaa gtgttaagaa ggtgcaacac agaaaaagca
     3601 taggctaagt aagaggcagc taactatgtg attgaatatt tgagctcagc tgccttgagt
     3661 ttttagtgag agagatgctc ataaataatc gcacttagag tttttaagtt tcatgttggc
     3721 aaaagaagaa actgattttt tatagaaaaa ataattggtt caaaaaatcc tgaaagcaca
     3781 tagagaacca catctgatgt tacacagcca tgagcaatat ccaaaatgat tgcacagtgg
     3841 tgataatctg ctctgattct tggctatttg cttactgcag cttgtgctct ctacattaat
     3901 ggaactgtat actagtgctg cagcctttac aactattccc tctctctttc tctctctctc
     3961 cccctaccaa caccattctc catcatcaga attaagtcca ggcaaatgtt acttcaccct
     4021 gtgatcagtt tgtcattcaa gcctgactgg cagagtctag gacacttgaa agtgccccaa
     4081 acacttcaag agaacttgtc acatatagct ggctaggagt tgttctgcca cacggaggta
     4141 taaatcatgg caaagcaagt agcagctccc tctaaattgc ctgacccgag ttcttttggg
     4201 ctgaccttct aaatctcact gatggctcta agccttgagt agcacaggtt tcagatctca
     4261 agttttcaaa agtcagaaat ttcctgccct aaagatgttg agctcagaag ctaattgctg
     4321 taggttcaga gtgcccacac tctttagact tgtagctccc aaactttagg tttgaggacc
     4381 accttcggct ccttaactct aggtgactct gtcaacctcc tttagtgacc atgatcttca
     4441 gcccctagag tctcagctac catcttcaac tcttcagagt ctcttgctgc ctccatactc
     4501 ctgccttcct tcatattcag agcttgttgc actgtctacc tttgctttct ctatgaaact
     4561 cttagttgcc tcttgatatt acaattccaa tctttgggaa tcagggttct tagctaaggg
     4621 tgactctcta gaacattgcc accatagctt acttatcatt gccactgtca gggctaaaaa
     4681 gcaaaatatg aatacaacct gtccagccta ctctatgggt acaaaatacc acaggctggt
     4741 ggcatataga ctattcaggg tatggcatgg aagctacact catgtaatat caacaacatg
     4801 gacacctgaa caagctcaac acaatgacaa taccggttgc catgcctgac tggattgggg
     4861 aaatcataaa aggctcctca ccagatgaag aactatagac aaacaatggc tgctaagagg
     4921 gcagaactag tcttcttcag ggacatcaat cccaagaagt caacacatat acataggacc
     4981 aatactaaat gcatagcaga ttatttcttt atacacatgt gtatgtaaat aaatatatat
     5041 gtaacaatca gaattaaaga cattgtgaat ttgagtggga cttggaagga tgtggggagg
     5101 aattgaggga aagagagggg taaaaatgat gtaaatacag tactcatgta tgaaatctca
     5161 aaaaaacacc aaaataataa aaagtatgta aacccaga
//
