LOCUS       XM_039090032            1001 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium calcium-activated channel
            subfamily N member 4 (Kcnn4), transcript variant X14, mRNA.
ACCESSION   XM_039090032
VERSION     XM_039090032.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039090032.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1001
                     /gene="Kcnn4"
                     /gene_synonym="KCa3.1; rKCNN4c; rSK4"
                     /note="potassium calcium-activated channel subfamily N
                     member 4; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 46 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:65206"
                     /db_xref="RGD:621476"
     CDS             173..907
                     /gene="Kcnn4"
                     /gene_synonym="KCa3.1; rKCNN4c; rSK4"
                     /codon_start=1
                     /product="intermediate conductance calcium-activated
                     potassium channel protein 4 isoform X3"
                     /protein_id="XP_038945960.1"
                     /db_xref="GeneID:65206"
                     /db_xref="RGD:621476"
                     /translation="MPRSEPQFSHLCNRSHECSSNLCLRQGSPGWPGTRYVAEDDRVL
                     LILLPPLPQVQGPQWVLYLLLVKCLITLSTAFLLCLIVVFHAKEVQLFMTDNGLRDWR
                     VALTRRQVAQILLELLVCGVHPVPLRSPHCTLAGEATDSQAWPGFLGEGEALLSLAML
                     LRLYLVPRAVLLRSGVLLNASYRSIGALNQVRFRHWFVAKLYMNTHPGRLLLGLTLGL
                     WLTTAWVLSVAERLSMPRDTSQTHCG"
ORIGIN      
        1 ggcctggggg ccctgagacg gagaaagcgc ctgctggagc aggagaagag ggtggccggc
       61 tgggcactgg tactggcggg aactggcatc ggactcatgg tgctgcacgc tgagatgttg
      121 tggttcctgg gttgcaaggc cctttcctcc aactgtgatt ctgaaggagc agatgccacg
      181 ctctgagcct cagttttccc atctctgcaa ccgtagccat gagtgctctt ccaatctttg
      241 tttgagacaa ggtagcccag gttggcctgg aactcgctat gtagctgagg atgaccgtgt
      301 acttctgatc ctcctgccgc cgcttcccca agtgcaggga ccacagtggg tgctgtacct
      361 gctcttggtt aagtgtttaa tcacgctgtc cactgccttc ctcctttgtc ttattgtggt
      421 cttccatgcc aaggaggtcc agctgttcat gactgacaac gggctccggg actggcgcgt
      481 ggcgctgacc cggcggcagg tggcgcagat cctgctggag ctgctggtat gcggggtgca
      541 cccggtgccc ctacggagcc cgcactgcac cctggcgggg gaggccacag actcacaggc
      601 ctggccgggc ttcctgggcg aaggcgaggc gttgctgtcc ctggccatgc tgctacgtct
      661 ctacctggtg cctcgcgcgg tacttctgcg tagcggggtc ctgctcaacg cgtcttaccg
      721 cagcatcggg gcgctcaacc aagtccgatt ccgccactgg ttcgtggcca aactatacat
      781 gaacacgcac ccgggtcgcc tgcttctggg cctcacgctg ggcctctggc tcaccacagc
      841 ttgggtgctg tctgtggctg agaggctgtc aatgccacgg gacacctcac agacacactg
      901 tggctgatac ccatcacgtt cctgaccatt ggctatgggg acgtcgtacc tggcacccta
      961 tggggcaaga ttgtctgctt gtgcaccgga gtcatggtga g
//
