LOCUS       XM_039102988            9435 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium calcium-activated channel
            subfamily N member 3 (Kcnn3), transcript variant X7, mRNA.
ACCESSION   XM_039102988
VERSION     XM_039102988.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9435
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9435
                     /gene="Kcnn3"
                     /gene_synonym="KCa2.3; SK3"
                     /note="potassium calcium-activated channel subfamily N
                     member 3; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 20 ESTs, 1 long SRA read,
                     6 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 36 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:54263"
                     /db_xref="RGD:2964"
     CDS             397..1653
                     /gene="Kcnn3"
                     /gene_synonym="KCa2.3; SK3"
                     /codon_start=1
                     /product="small conductance calcium-activated potassium
                     channel protein 3 isoform X3"
                     /protein_id="XP_038958916.1"
                     /db_xref="GeneID:54263"
                     /db_xref="RGD:2964"
                     /translation="MFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIA
                     MTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRL
                     YLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWII
                     AAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG
                     AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLL
                     KKIDHAKVRKHQRKFLQAIHQLRGVKMEQRKLSDQANTLVDLSKMQNVMYDLITELND
                     RSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLTAFVEARGISVAVGTS
                     HAPPSDSPIGISSTSFPTPYTSSSSC"
ORIGIN      
        1 accgggcagg gatgactatc tcctctgatg gagtactcat gggaagaggc tttccccgga
       61 agggaggctg taagtgtgac tgggtgagat cacccaaggt gtgtgctttc tcttctccca
      121 agccgttgat tctctggtgg tgatggtact aagggacagt ggccaggaag ctcccgcttg
      181 cctcagtttg tgaggtgacc acttccggtg taccttgggg atgggattgg aacaacaaaa
      241 tgtttagtga gacaaatgtc cctatctacc atggaggcaa acaggatcat gtcaaagaat
      301 aggaccaaat ctggagtttc agctctgcca cggttgactg tgtgattctt ggatgttgtg
      361 atactctgca aagctgtctc cagcgttcag gattccatgt tttcgttggc cctgaaatgc
      421 cttatcagtt tatccaccat catcctgctt ggtttgatca tcgcctacca cacaagggaa
      481 gtacagctct ttgtgatcga caatggtgca gatgactggc ggatagccat gacctatgag
      541 cgcatcctct acatcagcct ggagatgctg gtgtgcgcca tccaccccat tcctggagag
      601 tacaagttct tctggacggc acgcctggcc ttctcctaca ccccctctcg ggcagaggct
      661 gacgtggaca ttattctgtc catccccatg ttcttgcgcc tatacctgat cgcccgagtc
      721 atgctgctac atagcaagct cttcacggat gcctcatccc gaagcatcgg ggccctcaac
      781 aagatcaact tcaacacccg attcgtcatg aagacgctca tgaccatctg cccgggcacg
      841 gtgctgctgg tgttcagcat ctctctgtgg atcatcgctg cctggactgt gagagtctgt
      901 gaaaggtacc atgaccagca ggacgtaact agtaactttc tgggtgccat gtggctcatc
      961 tccatcacgt tcctttccat tggctatggg gacatggtgc cccacacata ctgtgggaaa
     1021 ggtgtctgtc ttctcactgg catcatgggt gcaggctgca ctgccctcgt ggtagctgtg
     1081 gttgcccgaa agctcgaact caccaaagca gagaagcatg tgcacaactt catgatggac
     1141 actcagctca ccaaacggat caagaacgct gccgccaatg tcctccggga aacatggctg
     1201 atctacaaac acacaaagct gctaaagaag attgaccacg ccaaagtcag gaaacaccag
     1261 aggaagttcc tccaagctat tcaccaactg aggggtgtca agatggaaca aaggaagctg
     1321 agtgaccaag ccaacaccct ggtggacctt tccaagatgc agaacgtcat gtatgacttg
     1381 atcacggagc tcaacgaccg gagtgaagac ctggaaaagc agattggcag cctggaatcc
     1441 aagctggagc acctcacagc cagcttcaat tccctgcccc tgctcatcgc agacaccctg
     1501 cgccaacagc agcagcagct gctcactgcc ttcgtggagg cccggggcat cagtgtggct
     1561 gtgggaacta gccacgcccc tccctctgac agccctatcg ggatcagctc cacctctttc
     1621 ccaaccccat acacaagttc aagcagttgc taaataaaac tccccactcc agaagcatta
     1681 cccataggtc ttaagatgca aatcaactct ctcctggtcg ctttgctgtc aaggaagttt
     1741 cagaccaggg aacagaacga agagagatgg agcgatgagc cgactcatgt tctttcagcg
     1801 tgctttgttc gatatgcctt gaaaccagaa atctaatctc tgtttaggtg cctctacttg
     1861 ggagctggaa gaggaggtga cgggaagcaa cgcctctgtc agggcccttg ctgcagagtt
     1921 ggcggagaac agaaatccct gctcaatctc aggttttcac agggaggtgg gggaggggca
     1981 gccactctga agcagaggag agggaagcca gccaaagagg ggtgtgctgg gcaagggtgg
     2041 tatgaggttt ggggaatggg ttcctggttg ccttgggacc acagcacacc tatccttttg
     2101 tctaaggaag cctctgggtg gtaaaaataa aacagagcta cccagaactt tccaaaatgg
     2161 acatacccaa attagactgg ggaggagggt gatggagaca aataaaaagc cagaatttcc
     2221 atccaatgat acgatccaac atatatacac acagatgttc aatccaggtc cttttctgtt
     2281 tgaattgagc ccaaatgaaa gggacctggt acttcgcctt gcacacagta agcaagctct
     2341 aattccgcat tgagatgatg tgtggggtgt gttttgttga ggaagttagc ggggattggc
     2401 catattctga gcttcactga agatgcaggt ccctccctga cagtgtcctg gttacccatg
     2461 ctgcctgatt caagtgtagg ccaagcccgc actgttggca ttgtggagag ataagcagcc
     2521 ttctaaaaac aaacaaaaac aaaaaaaaga cagcttttga agaattttct cccagccaga
     2581 taatctgtgt gcccttggaa cccacgttcc caggtgtctg tgtgtaggag aggaggagac
     2641 aagtatgctc agtgccccca tagtgaacag gactgatgtc tggggcgctg tcaaagcatc
     2701 ttcacccggc agcaggctcc ggccagacat gtaagagtac ggaaggatca gtgcctaacc
     2761 ctgctaggtt gggaggagaa gggtggggag tggctcctgt ggccccttct accttacctg
     2821 acatcatctc aaaaatgaaa cactgtgaga acacaaggcg ccctagggac acttgtgtgt
     2881 aaagtgagag gacacatttg ttagaagcct gtcctattgt gccacgttca tcttggggta
     2941 aaacctactc cactgaatct cagactccaa gagactccag agagaagcag acccagtata
     3001 aggacaggca ctccccaccc ccacccccca ttgctccgtg atctgaccgc acacacagcc
     3061 gtgcgggaga gctattgagt cacctctcat ttctccatcc agaggtcttc gatttctgct
     3121 tataagaaat tatatgtgga acatttcatc tatcttttgg taggcccaaa ggacgttgtc
     3181 tgtgtatagt tgctgtccgg agagtagtcc tgtggcaggt taccacagcc ccctggaggt
     3241 atcgccttac tctgtgcgtt tctcttgtgc actgctgggc ctggtccttt caggacaggg
     3301 aaattgctgg acatcaaggc agacaactgt ggcctggagg acatgccttg gttttttgtt
     3361 tgtttgttgc taagtctctt gtttgtcttt ccgccttgct gctgctgtct gtaccttgtt
     3421 tctgcagtgc tggagagcag gctcgcggct tcctgcatgt tagacaagtg ctgttccact
     3481 caaccacacc ccagcctact gctgttgtct taatggccta tcctcttaat ggtctatcct
     3541 gatcgctccc tcgagcattt tcattagctg ttttgcacac cagagaggcc acatttgtcg
     3601 ttagcattta attcttttta cttgttcttt taattattaa ttatctgaaa gattattttt
     3661 atcccgagaa tggtatccct gttttcagtt tgaccgtacc tacaggcaga cgtgcagaca
     3721 gaggaaatag gcatgtacct tctttgtgtc actgtttgca tttgacaaaa tgagggctgc
     3781 tgatgggccc acctcctcgt catttgacct acagccctca agtgtttcct ctgctctctg
     3841 ttgccgcttg ctctgatcct gtgctgtgtg gccatagcat ggcacctcta ggatttagtt
     3901 cccatttcac acaagtgaca cgcaagatcc caccacttct cctgccatgt atcaatcccg
     3961 gacatagtct aaaatctgtc cttttgtttt tattcttgct tagtaaaccc tgaaggccaa
     4021 gctagaaatg cttcaagagg atggctagaa ctgtttcagg agggtaccac tagcattaga
     4081 gagacacatg ggcctttgta gggtggcttg gcccactggt attgcaatag gtctgggtgg
     4141 tcttattgtt agcaaaagaa tctacctcga gaaacgtgac aggatcagaa ggctggctct
     4201 gtgagggtaa atgaagtgct gcttcttcgc cctactattt ccctaatatg agggaagtga
     4261 taattctctt gcaaatatat tgacccttga tgacctaggt attgaggacc ctggctagct
     4321 cgcccagatg tatccttgca tcttttagat gatcccatgt cacctaagca tctcagttga
     4381 gctaggaagg aggctagtgg gtgctcaggc tatgtggtag tgggagaggt ctgagtctca
     4441 ggactgggct gcaatttaaa accatgaatt actgtaattt cgctctaggc ctgaactggt
     4501 ccagttctgc tcactcctag aaggctgacc agtgacagag gccctcctgg catcttccca
     4561 ggaatgcagt agcagacaga agcactccaa catatcccca aatatctgga cacttgaatg
     4621 aaaactgtag agccaccgtg tcattgctta agccatatta ctgcttcagg tactgtggag
     4681 tcagggatgc actgtgatac tccaaggcca ctgagctcag tgggatttca ggacatagca
     4741 tcagttggta atttacgcct gactagaagc tcatttctcc ttagattgac atccaaataa
     4801 gaatctgcac ctttggctca aaggccacgt gtgtgatcac catcaataaa ccatcatgaa
     4861 gtgtttgtga gccattctta ccacctgcat aatgtagaac tccatgacat catgcctcga
     4921 gatatgaccc aaatgaatga gaggggctat agccatgcat cagcagggac tgtgaccccg
     4981 gcagggtcct acactgagac agcaaccttg taaattagaa gatgtagaaa ctgtacgtga
     5041 aagttagccc ccaagtgctg ggaaagttat taaaggccaa gaggggacag cgcagccttg
     5101 acaaataatg attttaatgt atccagagtt tccccttcgc tttgcagtaa cttccttgca
     5161 aagaagtcat ggaaagaaga aaactagtga cacaaaaatc agaataggta aaagcctgag
     5221 actggagtca catatcccac caatatgtct cagtttgcct gtatttaaaa gtgaagatga
     5281 gttaatatta agttcaaagt attcagtaga agacaaaagg tattgcttga ctgactagct
     5341 aacccgcact tagatgttac atttgaatgt agtgatagtt accaaaaggt aattactgca
     5401 caggggatag gtagcgattt gcagggagaa ccatggggtc tgtgcacagt tcaggaagcc
     5461 cccctcctcc ggaggatgat aaacagtgta tctcaaatta agagtcagtg tttcatctcc
     5521 aaatagacac cctggctaga gctagagaaa cccccgctga gacactgtga taccattgta
     5581 ctgccagcag gtcagaactt tccaaactac tgcttttaaa tgctcaaata ggttcccact
     5641 tcatccagtc actctacttc ccccaaagct actagaagca gattaaggat ccattagtgg
     5701 tcatttcgct gtccccgttg acttcatggt ctttggtttc agtcctttag atggctatct
     5761 ggaggcttcc tggcagacat gaacagttcg ttctctcccc tgtagccagc tggcttgttc
     5821 acgccttgga cagtatctct tccttcttca ctactgccaa agcaaacatt tggggaatgg
     5881 gattatagct agccctaaga cgggggcagg ggggatggag ggtagtgata gtgtctgcct
     5941 atagtaatag gaaacttgca ccaggctgta tgaatagtca ccaacggtaa acttctgcca
     6001 gacaaggaat gtgtagactt ccgttgaaat aggccacagc ttataaacat gtgttctgtg
     6061 cagtggtctg tagacaacca cagaggggga tgtaactgtg atctttttgt cttacaccat
     6121 tactggaaac gcccacacat gaactggagt tccctcggaa caacattgtc aaatcttcaa
     6181 cagacgacct ccgaaccagg tgccacgagc cctgcaacag ctgtttacac actgagaacc
     6241 atattctgga agctgcaacc ttgggcctgg actgacaaga gacctgtaac caatcaagct
     6301 ggtggaggaa aagcacaaat tcaataccaa cctctagtta agatcccaaa gagatgctga
     6361 catttctggc aaaaataaat aaataaataa ataataaata atatataaat aggaacagtg
     6421 acaaataaaa aagtgaatct gattggaaca gctgacatcc agcttcccag agggaggacg
     6481 gggctaagtg acattctcca gctgtgttac ttttcggatc ccaaccagag ctgatccacc
     6541 ttcgtcatac atggtgttta atggcgcaag agtgcaatca atttagtccc agactctcca
     6601 ttctgtgctg gccacaagag aacaagaaac ctgagagata ggatgttgat ggaggaaccg
     6661 ttttcatagc aaactcagaa atggaggtgt ttatattcca aaccagatgg gcttcagtat
     6721 gaatttgcat cttgcctctg tactgcttgc tattttttaa tgataggaga aagcataaca
     6781 gtttatttta aatatgaaat atattgctat attataaaat atattgtaac tttcgattaa
     6841 cattttgtat tgagctagtc tttagcaggt tgggtgacag cctgccttcc taatgactgt
     6901 ttctgagtac acatcattgt tagcggttgc ctgatcccca aacccagggt cctggttctg
     6961 cagcacgcca gacggccata ttctcattcc ctaagtctga gcagtaggga caaaaatagc
     7021 cctgaggtga gcatggaaga ataattccac tctaaattct atcaagccat ttcagaagcg
     7081 atttgtaaag ctgtccctcc ttgagtagcc actgacagtt tagtaaatgc tagactcttt
     7141 ctatctaaat gcaaacggcc cattctgtaa gttagcctca ggcatagccg accagctctc
     7201 ctctggcaat atcagaattg ggcattaaaa agagtcttgt ttactttgcc tcaaaatact
     7261 caaaattcta agcatcaagt ttctctatat aagagggcaa ccaagattag agttctctcc
     7321 gggcccagtg agaactggag gtggaggtgg aggtgtgctt ctctgagttg gcgatctctt
     7381 ggaggggggc atggttcagg aaggggaaga tcaaggcttc tccagtttgt cattggtgct
     7441 ggaggaggag gcaggatgtg cacagcaaga ctcagtaaag agccagtttc cttgtttgct
     7501 attcactgta gcgaggggaa gatggttctg aatatcacat ttcctcttat ggcaagaata
     7561 aacagctcat gaaacccact ccctccttct cgctacagta cctgagatat acgtgtagag
     7621 ttacagagtt ccttcctctg aattgccagg gtcctattct atattaaagt ggatgaagga
     7681 tgtcttccct aaatctgcgc atctccgatg aggaccttac ttcccggcat cacttctgca
     7741 cagcacagga caggcgcaga ccaagtagca tcaggggaga gttacctgcc tgcctcttcc
     7801 cttcacaaac cctggagatg cacacagatc cacagaccat gcaaaaccgt aggtgctgct
     7861 ctgggaaaga gactagaagc ctctaagttc cctaaacttc agcccataat gcctgttagt
     7921 cataccaatg acagacaacg tttctaaaca ttcaatcagc tggagtatcc agggctgtct
     7981 gtgtgaacaa atcgcgtctg cttctctcag catctgaatt actcctcagt tatgtgctag
     8041 gctgagctcc attaaagcca tcagaactcc agggcacctg tttttaacac attacttact
     8101 cactgagcaa tggaaatgag ctaactctca atttggtaat tgactgagag acattgattt
     8161 gtttctttat acatctccta ctccaaatgg agctattttg gctgtttctt ctagtgatct
     8221 atagactggc taagatgttt acaggtatag agaagacata tattctggcc tttcccattt
     8281 aaaatgtaac tcatccacaa tcaaagaaac tgagccagat ccctgatttg gcggaagcaa
     8341 gctctgggca ataattcatg tgtggtgtgt agccatatgc taatccttgc tactccaggt
     8401 gagagccaaa agccggcagc attcacatcc cccacacacc tgttagaagc aggctccgtg
     8461 ccaagcccac tcaatcacaa ttggcatttt aaccagagct cctggtgatc tgtaagcaac
     8521 caatactgag acacgctgac ctcaccacac tgcagtggta accaataatt cagctatttc
     8581 ttcctccaat ctcaagttac caaactgttg gatgatagac agctctgaca ggatttcaag
     8641 gataaagatg ggtgtatcat aaaattccac gtggtattgc acagtttaca tgatatacat
     8701 gaactataat gtcaattgga ggtggccttt ctctagtctg atgtgaaaaa ctgctcaagt
     8761 cacagctttg agccacctcg aagccttcag actataaggt ggagccatga caagtccctg
     8821 gatagaagtt cctccttagc atactgcaga aatgggacat ttctggtcct ctgtccctcc
     8881 aggagaaagc cagcatctcc cagtgaggac tctcctcttg gggactagaa aaaaaaaaac
     8941 tcagttcagc cattccgaca cattcctaat ctcctgaggg ttctcctttt tgttgtgtca
     9001 agcaaggtgg acaaggagag atgtgaattc tgatattggc accctaaatt gatatgtacc
     9061 cagaaacagt tatgttctaa attaatggct ttaacctgtt cattgtaaaa agtgccttgg
     9121 acttcaatct aaagaggtca gtataaatat gtatgtgtgt gtgatgtgta tgtaggcaaa
     9181 tatttacata tatatacata cacaggtgca tacacatata cctgcacatt catatataat
     9241 atatacatac atatataaat gcttcataat atatcatatt gctaatcaca gcttcttatt
     9301 ttgtttggtt ctatgtttat ttgtttagtg agatctttac atagaaaggt tctattcagg
     9361 acatggatgt attttttgtt tgttttttac tttttattaa aaaggtaaag gatattaaaa
     9421 gataaaaaaa aaaaa
//
