LOCUS       XM_039085061            4096 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus potassium inwardly-rectifying channel,
            subfamily J, member 12 (Kcnj12), transcript variant X2, mRNA.
ACCESSION   XM_039085061
VERSION     XM_039085061.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085061.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4096
                     /gene="Kcnj12"
                     /gene_synonym="IRK2; Kir2.1; Kir2.2"
                     /note="potassium inwardly-rectifying channel, subfamily J,
                     member 12; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 7 ESTs, 27 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:117052"
                     /db_xref="RGD:621660"
     CDS             81..1364
                     /gene="Kcnj12"
                     /gene_synonym="IRK2; Kir2.1; Kir2.2"
                     /codon_start=1
                     /product="ATP-sensitive inward rectifier potassium channel
                     12 isoform X2"
                     /protein_id="XP_038940989.1"
                     /db_xref="GeneID:117052"
                     /db_xref="RGD:621660"
                     /translation="MTAASRANPYSIVSSEEDGLHLVTMSGANGFGNGKVHTRRRCRN
                     RFVKKNGQCNIEFANMDEKSQRYLADMFTTCVDIRWRYMLLIFSLAFLASWLLFGIIF
                     WVIAVAHGDLEPAEGRGRTPCVLQVHGFMAAFLFSIETQTTIGYGLRCVTEECPVAVF
                     MVVAQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVALRDGKLCLMWRVGNL
                     RKSHIVEAHVRAQLIKPRVTEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIDE
                     ASPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLANEILWGHRFEPVLFEE
                     KNQYKIDYSHFHKTYEVPSTPRCSAKDLVENKFLLPSANSFCYENELAFLSRDEEDEV
                     ATDRDGRSPQPEHDFDRLQASSGALERPYRRESEI"
ORIGIN      
        1 tgtgactcct cttgtctagt tcagaagtgc ccccgcctgg agtcagcctg ggggcaggcc
       61 agggtccacc agaccccggg atgaccgcag ccagtcgggc caacccctac agcatcgtat
      121 catcagagga ggacgggctg cacctggtta ccatgtcagg cgccaacggt tttggcaatg
      181 gcaaggtgca tacacggcgc cggtgccgca accgctttgt caagaagaac ggtcagtgca
      241 acattgaatt cgccaacatg gatgagaagt cacagcgcta cctggctgac atgtttacca
      301 catgtgtgga tatccgctgg cgctacatgc tgctcatctt ctctctggcc tttcttgcct
      361 cctggttgct gttcggcatc atcttctggg tcattgcggt cgcccacgga gacctggagc
      421 cggctgaggg ccgcggccgt acaccctgtg tgctacaggt ccatggcttt atggcagcct
      481 ttctcttctc cattgagacg cagaccacca ttggctacgg gctacgatgc gtgactgaag
      541 agtgcccagt ggctgtcttc atggtggtgg ctcagtccat tgtgggctgc atcattgact
      601 ccttcatgat cggcgccatc atggccaaga tggcgcggcc caagaagcga gcacagactc
      661 tgcttttcag ccacaatgcc gtggtggctc tgcgtgacgg caagctctgc ctcatgtggc
      721 gcgtgggcaa cctgcgcaag agccacatcg tagaggccca cgtgcgagcc cagctcatca
      781 agcccagggt cacagaagag ggtgagtaca tcccactgga ccagattgac attgacgttg
      841 gctttgacaa gggcctggat cgtatcttcc tagtatcgcc catcaccatc ttgcacgaga
      901 ttgatgaggc cagcccactg tttggcatta gccgtcagga cctcgagacg gacgactttg
      961 agatcgtggt catcctggaa ggcatggtag aggccacagc catgaccacc caggctcgca
     1021 gttcctacct ggccaacgag atcctctggg gtcatcgctt tgagccagtg ctcttcgaag
     1081 agaagaacca gtacaagatt gactactcac acttccacaa gacctatgag gtgccatcta
     1141 caccccgctg cagcgccaag gacctggtgg agaacaagtt ccttctgccc agtgccaact
     1201 ctttctgcta tgagaatgag ctagccttcc tgagccgaga tgaggaggat gaggtggcta
     1261 cagaccggga tggccgcagc cctcagcctg agcatgactt tgacaggctg caggccagca
     1321 gtggtgccct tgagcggccc tacagacggg agtcagagat ttgagtgccc ttggcttaga
     1381 tgcagcacca ccctgaccac gataggttcc atgtcccttg gggacctgtg tttgagcaga
     1441 gcaggccgaa tgccttgggt cacagactca gtaacatctt agtctttttc atgttttctt
     1501 gcaatagctt gggaaagttg gcaggagggt ggatggccag aatgaccagc tcatggcctc
     1561 ggaggctgat gtatacacac gggcaaggaa gtgatttctt ggggtagggt tgtacaggag
     1621 ttggggactc tgctggaggc ctcgggagca ggtcctagcc atggtgggag aaggctgtgt
     1681 atgtacactt cattggtttt taatttgggc aagactgttt acaaacaaaa acaaaaacaa
     1741 aaaaacccac aaaacacaag aaaacactaa caggtggttc aatttttaaa attcatggtg
     1801 tagggacagc tggaatattc tactcagcgc tgcgaagcaa tcagttgtat ggagacccct
     1861 gaaggttctc agaggtcggg tttctccctc acgtgggcca gggccctgca agttgtcatt
     1921 cttaaggatg gatcaggcag tttgtgacca tgttacgatc ctaataaagt atctgggtgt
     1981 ctctgggggt ggggcccact agggtgaatc tggcttgctc ttctgtttga tgttgtacct
     2041 cagctgcctc agggctgggt ttagaccccc acccccaccc ccgacttcgt gctcctgctg
     2101 tgcttcactc cctgtctgcc ccaggtctcc atcccttgca gtaaggggca taggaaacac
     2161 cagagtgggt gcttcttaga aaaggacact caggaaatta gcatggggtc tgggtcccac
     2221 gttcccagga agtgggtcag ccccgccccg ctgctggact cacagcttga gtcgtgcctt
     2281 agagactctg gttgtctggc ttccgtcact tctgctcctc tcagacttgt ttaatctttc
     2341 cctactcccc ctaactccac tcctgaagtt cccacaggcc cctctgaggt ggccgaggct
     2401 gctctctcac aaccatgtct ctgcctacct ttggggcaga atgaggaagc cctgctggcc
     2461 ccagccagtc atctcctact gggaggcaga gtctaggagt ggagagaaac aacccctagc
     2521 ccccatcctg caccagcccc ctgccccata gagactacca gagaaatgtc ataaaacaaa
     2581 gacttcctgt ttagctttta ggaacctgta gtggaacttt tccttcctga agcccaagcc
     2641 atggagtctt cccatagtgc ccagttaggg acacctgagg tgggcttgct cccaggcatc
     2701 tagtgtaaga ttccaggcta attcctaacc taggagattc ccctaggacc tgctgcagag
     2761 gcatgagctc cattgtgttc ttggccagac ctctgtcccc aaatctcact gacttttcta
     2821 gccttggccc tggggcctaa gggtgcattc agcctgggag tgttgtctgt cactcacctc
     2881 tctgtcaggg ataggagggc cagagggtgg gtcttggcca ctgggtgcca ctgtaggagc
     2941 cggggcccct gttgttcttt ctgcataggt agacctgtag tcagaacagg gtctaggggc
     3001 tcctggtcct ccaaggcctg ctcccagctc atctcagtgg cctgaagcat tcagaattct
     3061 agccagccca tcctcctcca ggcccagacc tgccagaatg gtccagtccc tgggccctgc
     3121 tggagagcag ctcaagccgc ctttcatctc tggcaaaggc aggcagatgc tgtattttca
     3181 aattcttctg ccctcttttt tcctctttcc ctgtatttat ttattgctcg tgctaaagac
     3241 caaactagcc cccctcttta gtgcacctga tgggggaggc cactgagagg ggagccatgc
     3301 gcctgtgcct gtgccaagca ggaaggcttg gcccctgggg agtgcatgag aaggaaaacc
     3361 agggtgtgtg tgtgtgtgca cgcatgtcca gacgtgctca catgattgtc ttcctgtgtg
     3421 tgatgcttgg tatacaggtg tatggtatac acaggtgttt gtgtacaggt cgtctatgtc
     3481 cgcccacggg catgtgtgtg cttgtttttt tattcaggaa aggtgggttt agtgctcacc
     3541 aacctgaact ggtcaggctg gatgctggcc acagacatga tcacagtccg acttgagtcc
     3601 ctgccctgcc ctagttatgc aggctgtacg cagtgtgcct cagtctgagg agtctgatgg
     3661 taagtaagcc tttgcagcag atcctgctgg aggccttgga tgcatctgtg tgtgtgtgaa
     3721 catgtgtgag tgtgtggagg tcccagggtg tgtgtatgtg aatgtcagtg acgtgggtgc
     3781 tgtgtgcagc attgagagag agagcgagag agagagagag cgagagagag agagagcgct
     3841 gcacaggatg aagcagctgc ctgagcccat ctggtgctgt gcacctggcc cttgtccagc
     3901 cgagggcctg ggggcagaag aacacaccat agggaggccc ttgtctgggt gtccgccctg
     3961 tgtgaggtca tagaatgtta aatctatttt aaacggtgaa actggagaat tttcatgtta
     4021 ttttcaatac atagtggtat ctaaagatgt aggcaacgag actagatcac attaaatgca
     4081 ttttgatctc tttgaa
//
