LOCUS       NM_001128192            1614 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus potassium channel modulatory factor 1 (Kcmf1),
            mRNA.
ACCESSION   NM_001128192 XM_001069861
VERSION     NM_001128192.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC167075.1.
            
            On Jun 10, 2008 this sequence version replaced XM_001069861.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167075.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q32"
     gene            1..1614
                     /gene="Kcmf1"
                     /note="potassium channel modulatory factor 1"
                     /db_xref="GeneID:684322"
                     /db_xref="RGD:1591490"
     exon            1..112
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             97..1242
                     /gene="Kcmf1"
                     /EC_number="6.3.2.-"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase KCMF1"
                     /protein_id="NP_001121664.1"
                     /db_xref="GeneID:684322"
                     /db_xref="RGD:1591490"
                     /translation="MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTT
                     RHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHA
                     ETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRG
                     LGGPRARRSNMHFTSSSTGGLSSSQSSYSPSSREAMDPIAELLSQLSGVRRSAGGQLN
                     SSGPSASQLQQLQMQLQLERQHAQAARQQLETARNASRRTNTSSVTTTITQATATANT
                     ANTENSPQALHNSQFLLTRLNDPKMSEAERQSMESERADRSLFVQELLLSTLVREESS
                     SSDEDERGEMADFGAMGCVDIMPLDVALENLNLKESNKGNEPPPPPL"
     exon            113..280
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            281..420
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            421..522
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            523..697
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            698..980
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1594
                     /gene="Kcmf1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccggccg ggcgcgggca gcgccgggag cccgcggtgg gggcacactg cagccgggag
       61 cccgggaggg gccgcgccgc cagcgtctga actaggatgt cccgacatga aggtgtcagc
      121 tgtgatgcat gtttaaaagg aaattttcga ggtcgcagat ataagtgttt aatttgctac
      181 gattacgatc tttgtgcatc ttgttatgaa agcggggcaa cgacaacaag gcatacaact
      241 gaccacccga tgcagtgcat attgacaagg gtagattttg atttgtacta tggtggggaa
      301 gctttctctg tagagcagcc acagtctttt acttgtccct attgtggaaa aatgggctac
      361 acggaaacat ctcttcaaga acatgttact tctgaacatg cagaaacatc aacagaagtg
      421 atttgtccca tatgtgcagc gttacctgga ggcgatccta atcatgtcac agatgacttt
      481 gcagctcatc tgacacttga acacagagcc cctagagatt tagatgaatc gagtggtgtt
      541 cgacatgtac gtagaatgtt tcaccctggt cgggggttag gaggccctcg tgctcgtaga
      601 tcaaacatgc actttactag cagttctact ggtggactct cttcttctca gagttcatac
      661 tctccaagca gtagggaagc catggatcct atagctgagc tgttatctca gttatcagga
      721 gtgagacgtt ctgcaggagg acagcttaac tcttcaggcc cttccgcttc tcagttgcaa
      781 caactgcaga tgcagctgca gcttgagcgg cagcatgcgc aggcggcccg gcaacaactg
      841 gagactgctc gcaacgcaag tcggcgcact aacacaagca gcgtcaccac tacgatcaca
      901 caggccacgg ccacagccaa cacagccaac acagagaaca gcccgcaggc cctccacaac
      961 tcccagttcc tgttaacaag gttgaatgat cccaaaatgt ctgaagcaga gcgccagtcc
     1021 atggaaagcg agcgtgcaga ccgcagcctg tttgtccagg agctccttct gtctacgttg
     1081 gtgcgtgaag agagctcgtc ctcagacgag gatgaacggg gggagatggc agattttggt
     1141 gctatgggct gtgtagatat tatgccttta gatgtcgctt tagaaaacct aaatttaaaa
     1201 gagagtaata aaggaaatga gcctccacca cctcctcttt gatgacctcc ccactcgcag
     1261 acaatgtcct ctgtgctgta tttgccaatg aaagtggaca acagctatcc tgggtttgtg
     1321 tggtgattgt aatttcaggt ctgtcactct tgttacattg tgtacattca aaaggaagag
     1381 agaaatatat atgataatca tttccactta actaattttt acttctagca ggtaaatgta
     1441 ggtagcagtg cagggtgatc tctgcttcct gtaccttgac atgcaaaagg ctctcctaat
     1501 actccacatt caaactgaag aggaaattga aatctctaat gaagctgctg tgtgtattta
     1561 tgaatattaa tgaataaaaa ctgcttggat ggttaaaaaa aaaaaaaaaa aaaa
//
