LOCUS       NM_001399486            2421 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus kelch repeat and BTB domain containing 4
            (Kbtbd4), transcript variant 1, mRNA.
ACCESSION   NM_001399486 XM_006234508
VERSION     NM_001399486.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 10, 2022 this sequence version replaced XM_006234508.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.2259621.1,
                                           SRR26643429.12335.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-142               JAXUCZ010000003.1  97339596-97339737
            143-760             JAXUCZ010000003.1  97340529-97341146
            761-867             JAXUCZ010000003.1  97342481-97342587
            868-2421            JAXUCZ010000003.1  97344046-97345599
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..2421
                     /gene="Kbtbd4"
                     /note="kelch repeat and BTB domain containing 4"
                     /db_xref="GeneID:311185"
                     /db_xref="RGD:1310234"
     exon            1..142
                     /gene="Kbtbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            143..760
                     /gene="Kbtbd4"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..1728
                     /gene="Kbtbd4"
                     /note="isoform 1 is encoded by transcript variant 1; kelch
                     repeat and BTB domain-containing protein 4; kelch repeat
                     and BTB (POZ) domain containing 4"
                     /codon_start=1
                     /product="kelch repeat and BTB domain-containing protein 4
                     isoform 1"
                     /protein_id="NP_001386415.1"
                     /db_xref="GeneID:311185"
                     /db_xref="RGD:1310234"
                     /translation="MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELF
                     ADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDY
                     IYHGTVKLRADELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDP
                     ELYTAAKHCAKTHLAQLQSTEEFLHLPHHLLTDIISDGVPCSQNPTEAIDAWINFNKE
                     EREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQ
                     ITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYS
                     LGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDF
                     FTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDS
                     FTRLCLPEAWSSAPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKV
                     LLTNLQFVLA"
     exon            761..867
                     /gene="Kbtbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            868..2421
                     /gene="Kbtbd4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggttccg gatctgaaca ttggcatgaa aggaggtaac gcaggtaaga aagacccgca
       61 ggtggggaaa ccgtgaggtt ctacgtagcc ctattttggt acggcggagg ccgaagagaa
      121 gaagacgcaa agaatcggac ggatagttgg cagaaagaga agttggctac catggagtca
      181 ccagaggagc ctggagcatc catggatgaa aactactttg tgaactatac tttcaaagac
      241 cggtctcact caggccgagt ggctcagggc attatgaaac tgtgtttaga ggaggagctc
      301 tttgctgatg tcaccatttc agtggaaggc cgagagtttc agctccaccg gctggtcctg
      361 tcagctcaga gctgcttctt ccgatccatg ttcacatcta acctgaagga agctcacaac
      421 cgggtaattg tgctgcaaga tgtcagtgag tctgtgttcc agctcctggt tgattatata
      481 taccatggga ctgtgaaact tcgggctgat gagctgcagg agatttatga ggtgtcagac
      541 atgtatcagc tgacatctct ctttgaggaa tgttcccggt ttttggcacg cacagtccaa
      601 gtgggaaact gccttcaggt gatgtggctt gcagataggc acagtgaccc cgagctctac
      661 actgctgcca agcactgtgc caagacccac ctggcccagc tgcagagcac agaggagttt
      721 ctccacttgc cccaccatct actcactgat atcatctcag atggggttcc atgttcccag
      781 aacccgacag aggcaataga cgcttggatc aatttcaata aagaagaaag agaggctttt
      841 gcagagtcac tcaggactag cttaaaggaa attggggaga atgtgcacat ttaccttatt
      901 gggaaagagt catctcgaac ccactcattg gctgtgtcct tgcactgtgc agaagatgac
      961 tccatcagtg taagtggcca aaacagcttg tgccaccaga tcactgcagc ctgcaagcat
     1021 ggtggcgact tgtatgtagt gggagggtcc atcccacgac gcatgtggaa atgtaacaat
     1081 gccactgttg attgggagtg gtgtgctcct ttgccccggg accgcctcca gcataccctg
     1141 gtatctgtgc ctgggaagga tgccatatat tccctgggtg gcaagacact gcaggatacc
     1201 ctttcgaatg cagtcatcta ctatcgggta ggtgataacg tgtggacaga gacaactcag
     1261 ttagaggtgg ctgtatctgg ggccgctggt gccaacctca atggaatcat ctacttacta
     1321 gggggtgagg agaatgatct agacttcttt accaaacctt cccgacttat ccagtgcttt
     1381 gacacagaaa ctgacaagtg ccatgtgaag ccctatgtac taccctttgc aggccggatg
     1441 cacgcagcag tgcataagga tctggtgttc attgtggctg agggggactc tctagtgtgc
     1501 tataatcccc ttctagacag ctttacccgg ctctgtcttc ctgaggcctg gagctctgcc
     1561 ccatccctct ggaagattgc cagctgtaat ggaagcatct acgtcttcag ggaccgatat
     1621 aagaagggag atgccaacac ctataagctc gaccctgcca cttcagctgt aactgtcaca
     1681 agaggcatta aggtgctgct taccaacttg cagtttgtgt tggcctaaaa cactgatgag
     1741 aagaacagct gactcctttg ccctcccctc gtcatgtatc cccagtcaaa tctgaaatcc
     1801 cccagttcag agtaatgtgt tagtttgggc atacaggagg aaggcagcga gcgcctcagc
     1861 ccaccccaag gctcatgggg tgctatgtgt agggcttttc attctactgc tgcttgaact
     1921 ctgccattat cccctgtgat cctgtgcctc acttcagact gcttagagcc agcctcttct
     1981 cagacttagg cacagccccc cttaccagat cagtgttaaa aagaagcacc ttgggtccca
     2041 tgcaggaaga caggcccgtt ccttttgtct atagccagca gagtggcgag ttgtcactgc
     2101 tccacagaga attaagtatg agagtttccc ttcaggattt ggatgggaca gtggactaag
     2161 ctaaaactgt acttcaccag caagaatcaa ctgtacaatt caggatgtcc ttcagatgtt
     2221 tcctcatctg tcaggaaaag aaactttggt tggatttttg gcttatacag acagataagc
     2281 cagaaagtag aaacaattgt ttctgattaa tagcagaaac tgtattctaa actcaaatat
     2341 aaacagtctc tggtctttta aaggctctaa gctaaataaa gagttaggaa ctgttcatac
     2401 aaataaaagc ttttgaaatg a
//
