LOCUS       XM_003749799            4838 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus kelch repeat and BTB domain containing
            12 (Kbtbd12), transcript variant X1, mRNA.
ACCESSION   XM_003749799
VERSION     XM_003749799.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003749799.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003749799.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4838
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4838
                     /gene="Kbtbd12"
                     /note="kelch repeat and BTB domain containing 12; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:502859"
                     /db_xref="RGD:1585999"
     CDS             334..2217
                     /gene="Kbtbd12"
                     /codon_start=1
                     /product="kelch repeat and BTB domain-containing protein
                     12 isoform X1"
                     /protein_id="XP_003749847.1"
                     /db_xref="GeneID:502859"
                     /db_xref="RGD:1585999"
                     /translation="MESKTEGKGKHQHSLNLLDKIKTMKELEEMVDVVLIAEEEKFPC
                     HRLVLAAFSPYFKAMFTCGLLECTQKEVILYDITAESVSVILNYMYSAVLEINNANVQ
                     TVAMAAYFMQMEEVFSVCQNYMMDHMDASNCIGIYYFAKQIGAEDLSDQSKKYLYQHF
                     AEVSLHGEILDIEAHQLLALIKSDDLNISREESILDLVLRWVNHNQALRTEHLVELLK
                     QVRLELINASFLRQALRRNTMLLCDGSCIDMIQNAFKAIKTPQQHSSNLRYGMETTSL
                     LLCIGNNSSGIRSRHRSYGDASFCYDPVSQKTYFISSPKYGEGLGTVCTGVVMENNTI
                     IVAGEATATRLSRQKSKNIEIYRYHDRGNRFWEKLCTAEFRELYALGSIHNDLYVIGG
                     QMKVKNQYLITNCVDKYSVDQDNWKRVSPLPLQLACHAVVSVNNKLYVIGGWTPQMDL
                     PDEEPDRLSNKLLQYDPSQDQWRERAPMQYSKYRFSAAVVNSEIYVLGGIGCLGRDKG
                     QVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTSAGAVDGKLYVCGGFHGADRH
                     EVISKEILELDPWENQWNVVAVNVLMHDSYDVCLVARMNPRDLIPPPSDLTEEDGDRR
                     QQR"
ORIGIN      
        1 gcacctgtta cctctgggtg gccgccagcg ccctccttgc cctctctggg acgccgcttg
       61 tcccccgcac cccctcgctc cgtctattta tagcgcttgt cctcactggc ccatttcggg
      121 tagtgtgatc agtcaggtct gcccggctgc gccctcgcga ccccgcgcct tgcccagtca
      181 ccgcgccgtg gcggcggagc gagcgggccg ggcagcatcg agaatgcttc atggcatctc
      241 cattgatttg tgagcaatca gaaatgtaaa tagctcctca ggaatcaagc taagcccaaa
      301 gaagcctcac ttaccaattt caaggagtgc atcatggaga gcaagactga gggaaaggga
      361 aaacaccagc acagcttgaa cttactagat aaaattaaga ctatgaaaga attagaagaa
      421 atggttgatg tagtgctcat agcagaagag gagaaatttc cttgccacag actggtcctc
      481 gctgccttca gtccttactt caaggctatg ttcacctgcg gactacttga gtgcactcag
      541 aaggaggtca tactctatga catcacagca gaaagtgtgt cagtgatact aaactatatg
      601 tacagtgctg ttctggagat caataatgcc aacgtacaga ccgtagcaat ggccgcctat
      661 tttatgcaga tggaagaagt ctttagtgtg tgccagaact atatgatgga ccacatggat
      721 gcctccaact gcataggaat ttattacttt gcgaaacaaa ttggagcaga agatttatct
      781 gatcagtcaa agaagtattt atatcagcac ttcgctgagg taagccttca cggagaaata
      841 ctagacatcg aagctcacca gcttctggca cttattaagt ctgatgatct gaatatatcc
      901 agggaagaga gcattctgga cttggttctg agatgggtaa atcataacca agctttgcgc
      961 acagagcatc tggtcgagct tttgaagcaa gtcagattgg aacttataaa tgcatccttc
     1021 ctaagacagg ccctcaggag aaacacgatg ctcctttgtg atggcagttg cattgatatg
     1081 atccagaatg cattcaaagc catcaagaca ccccagcagc actcctctaa tctccgctat
     1141 ggcatggaga ccaccagcct tctgctttgc attgggaaca attcatctgg aatcagatca
     1201 cggcacagga gctatgggga tgccagtttt tgttatgacc ccgtgtcaca gaagacctat
     1261 tttatctcat cgcccaagta tggggaaggt ttgggaacag tgtgcactgg ggtagtcatg
     1321 gaaaacaata ccataattgt ggctggagaa gcaactgcca ctaggctttc taggcaaaag
     1381 agcaagaata ttgaaatcta taggtatcat gatagaggaa accggttttg ggaaaagtta
     1441 tgcacagccg aattccgaga gctctatgct ctgggcagca ttcataatga cctctatgtc
     1501 ataggaggac agatgaaagt taaaaaccag tacctcatta caaactgtgt tgataagtac
     1561 tcggtagatc aagacaactg gaaacgagtg tctccccttc cactgcagtt ggcttgtcat
     1621 gctgtggtat cagtaaacaa taaactgtat gtcatcggag gctggacccc tcagatggat
     1681 cttcccgatg aagagcctga tcgattaagc aacaaactgt tgcagtatga ccccagccaa
     1741 gatcaatgga gagagcgcgc acccatgcag tactctaagt accgattcag tgcagccgtc
     1801 gtcaacagtg agatctatgt tctgggtgga attggctgtc tgggccgaga caagggacaa
     1861 gttcggaaat gccttgatgt ggtggagatc tacaaccccg atggggactt ctggagggaa
     1921 ggcccgccta tgccaagccc cctcctctca ctgagaacca attccaccag cgcgggtgcc
     1981 gtggatggga agctttatgt ctgcggtgga tttcatggag cagatcgcca tgaggttatc
     2041 tccaaagaga ttctggagtt ggacccttgg gagaaccagt ggaacgttgt ggccgtcaat
     2101 gtcctcatgc acgacagcta tgacgtctgc ctggtagcta ggatgaaccc ccgggacctc
     2161 atcccaccac cctcagatct gaccgaggaa gatggtgacc gcagacagca gagatgagga
     2221 actccaagcg gaagaggcta cagctagaga agtgatggcc tggcagccat gcttgggctg
     2281 ctcagaatgc aaaccgcagc atactgtgtg acgctgacgt tctcactgca tgcatagcag
     2341 cccctgcata aagcggcact gagcagcggc agggggaggg ggtgcagggt cttccctcag
     2401 gggcaaccca gactggtaaa gtagatatag gagtgcaggg caaacagtga ggatgcatag
     2461 gggtaggaca gggtgcagag gagagcagca ccttgctctg ctggggactc aggaatatgg
     2521 ccaagcagtc ccataggtgc ttttgatgct gaggtggtgg gaaaggacaa aggtactaaa
     2581 gtaggaaagc aggtgcgtgt ccggggatct agtccagcct ggccacaccg cttgcacaca
     2641 gcatttgccg ctgaaaggtt agacctaggt gaccagtgcc tgaaagagga aggacatagg
     2701 cctgggcctg ggtgcagagc catctctctt ggagctttgc cccagcacag tctgttagaa
     2761 ccgcccaaac tacatacagc agccgtgccc actgtggccc tgcctgtggc caaatgttca
     2821 tgcctgttgc catgggccac catgagcaga gcattcctag acacagaggg tcccacctct
     2881 ggcttaattc tgagtgtata gactgagctt gcccaggtct tgactcagct ctcagctata
     2941 caggaccttc ctagggtggg gctgaacgca gcatgtctaa acacgaggac ccaaagtagg
     3001 ctctgaatga ggagggaaaa ggcatattgg ctacctgctg cctccttcag atccctgccc
     3061 tggctgggag ggggaatggg agggggagct tacctcagtc caagcatggt gcagtgagct
     3121 ctccccagat atattagggg tatgtgcaat tacatgtgga aacctatccg ttttgcttcc
     3181 attcacatgt ctggacgcac agcagatcaa tacgtgactg ttctctaacg tcactagagc
     3241 tcctatgtaa gcagtgtgga caccctgggg tcttccagga ggctgccaga tcttgcatgg
     3301 agacagctct ttatcaatgc atactctcca agttccaacc tctccctgac aggaaaaggg
     3361 atgctcaatc aaactggagc cactgacatc acagtattct gccccctgtg cccacacagg
     3421 tgtgccccca gaaggctaca ctctcagagg caggggccac acctgtctct ctaggttacc
     3481 ccctcagtcc ctgtcgcagt acctagcaca cgaatggagt gttggatgac tgaagtacac
     3541 agcatttcta agccaggatc ttggtctctg agctcgtctg ggacttggat ttcaatgccc
     3601 tcattgtgcc ccccagtgga gggtggtgat ctgagggttt cttttctcag ggcaaatcag
     3661 agctgcccca ggcagactgg gcagaagctc taaaggaaag gtctctgttc ccctgagtgc
     3721 ccttccagaa tctctgttcc tgctcaccca cccagcatat tagaagccac ttgtcccctg
     3781 atcatgggct gcagtgtgtc ttctgaatgc acagccagga ccatgggcag aactttgcaa
     3841 atcttacctt cctcatatgc agaataggaa gggaaacgcc acattcttta cagagttgat
     3901 gagtggactg agttggaaaa cactgaatga aatactgtgt taaacacaaa caccatgaac
     3961 aggttttaac tgccggcctg tgttgctgtc accataatca gtctttcctg ggacaaagta
     4021 caaaacagaa cctgggacct taaggaatct cagatctcag ggagagatgt ggtaatttaa
     4081 ggtggtttct aatgtcccct gtgcttggtt ccctcggcgg tgaatccctt cagtaagtag
     4141 gaccttgaga ccataagcag atgcctggga ggcatcacat ggtagtgaaa gccatcctgg
     4201 gctaggacac tgccgccgtc tatgctaggg attatgggaa ctttccaggg gatgctaggg
     4261 ggaggacaaa ggagaatagc tggtctccct ggagcagaca cgccctagaa atgtttcagc
     4321 actggagggg aggctggagc ggggagcatt ctcaggccta ttccgggcag gtacagccaa
     4381 ggtctcagac ttgagttccc ttctacatct agaacccaga gtccgggctc gctgactgtg
     4441 gtgctccctt tcagctctgg tgcttctcat ctgcctttcc tatttgtgat tcaaaccaac
     4501 ctgtactgcc ctcccggaga actattgtta gagattcctt ttggacagac ctccctgcca
     4561 ccccttcaca ggcattgaag gtgttctgac actgctggga aggcctctta gaaatgtcta
     4621 ctgttggggc ttcttatctt tgtgactcag gattgctgga tgcctagtga gaaaacacaa
     4681 tggggaagta atttggatgc tgggctgata aagggctgca gctgtcagcc acactgactc
     4741 agtttgtgcc cagcaagagg cggcattgtt ctctggctga ctttataatg aggaaatgct
     4801 ctgagtgcgg acttacagaa tacatttttg ctaatgaa
//
