LOCUS       NM_001109645            2841 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus katanin regulatory subunit B1 like 1 (Katnbl1),
            mRNA.
ACCESSION   NM_001109645 XM_001078752
VERSION     NM_001109645.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Cheung,K., Senese,S., Kuang,J., Bui,N., Ongpipattanakul,C.,
            Gholkar,A., Cohn,W., Capri,J., Whitelegge,J.P. and Torres,J.Z.
  TITLE     Proteomic Analysis of the Mammalian Katanin Family of
            Microtubule-severing Enzymes Defines Katanin p80 subunit B-like 1
            (KATNBL1) as a Regulator of Mammalian Katanin Microtubule-severing
  JOURNAL   Mol Cell Proteomics 15 (5), 1658-1669 (2016)
   PUBMED   26929214
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC161951.1.
            
            On Apr 6, 2008 this sequence version replaced NM_001109645.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161951.1, SRR8487227.181968.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2841
                     /gene="Katnbl1"
                     /note="katanin regulatory subunit B1 like 1"
                     /db_xref="GeneID:691543"
                     /db_xref="RGD:1582771"
     exon            1..95
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            96..211
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..1009
                     /gene="Katnbl1"
                     /note="katanin p80 subunit B-like 1"
                     /codon_start=1
                     /product="KATNB1-like protein 1"
                     /protein_id="NP_001103115.1"
                     /db_xref="GeneID:691543"
                     /db_xref="RGD:1582771"
                     /translation="MAFDTHHVKKRNFSNSIDLPRKRISNFTSKNMKEVKISPKQLAA
                     YISRTVGQAVKSPDKLRKVLYHRKLVRHSFPNPCYKTKQSPRSGGCDMANKENELACA
                     GHLPENLHHDSRTFVINTSDSGSSQTENPSSKYSGFFSEVSQDHETMAQVLFSRNLRL
                     NVALTFWRKRSVSELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQCISLGCCVDLFPLV
                     KSLLQSRFEEYVIVGLNWLQAVIKRWWSELSSKSEIISDGNIKILKQQLNGLWEQENH
                     LTLVPGYTGNIAKDVDAYLLQLH"
     exon            212..252
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            253..532
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            533..651
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            652..702
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            703..792
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            793..882
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            883..976
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
     exon            977..2818
                     /gene="Katnbl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcccggctg gggatccgaa agaagctcct agctgccagg cgcggttcat cagcacagtg
       61 gccgggctca ggcgctgcgg taccatgagg cgccggcact taagagatta tggcatttga
      121 tactcaccat gttaaaaaac ggaacttctc taatagtatt gatcttccta gaaagaggat
      181 ctctaatttt accagtaaga acatgaagga ggttaagata tctccaaaac agttggctgc
      241 gtacataagt agaacagttg gacaagcagt gaaaagccca gataagctgc gcaaggtact
      301 ctaccacaga aagttagttc gtcattcatt cccaaatcct tgttacaaaa ctaagcagtc
      361 ccctagaagt gggggctgtg acatggcaaa taaagaaaat gaactggctt gtgcaggcca
      421 tctacctgaa aatttacacc atgacagtcg gacatttgtc attaacacca gtgattctgg
      481 gtcttcacag acagaaaacc catcatcaaa atatagtggt ttcttttctg aggtttctca
      541 ggaccatgag acaatggccc aagttctatt cagcaggaat ttgagattga atgtagcttt
      601 gactttctgg agaaagagaa gtgttagtga acttgtagct tatttagtga ggatagaaga
      661 ccttggagtt gtggtagatt gccttcctgt tctaaccaat agtttacagg aagaaaagca
      721 atgtatctct cttggctgct gtgtagactt atttcctcta gtaaagtctt tacttcaaag
      781 cagatttgaa gaatatgtaa ttgttggctt aaactggctt caagcagtaa taaaaaggtg
      841 gtggtcagaa ctctcatcta aatcagaaat tataagtgat ggaaatatta agattttaaa
      901 gcaacagttg aatggattat gggaacagga aaaccatctt actttggttc caggatatac
      961 tggtaatata gctaaggacg tagatgctta tttattacag ctgcattgag agatttcatc
     1021 ttcccaagag tgtttggtta ttcagacagc gctggattac atgatttcca aaagtaggtc
     1081 tctctggaga accgagaact gtggaagaag taaaaccatt tttttctttt aaaaagccag
     1141 ataataaaac cactaatgaa atcctaacaa tctacttcac attgaagtgg aaatatccag
     1201 aaggagcagc ttcagcttca atgaggtgaa agtgcactat gaagactgtt tgcctttgct
     1261 gtgtgcagat tttacgtggc catttggtag cgttgtttta gaactactgg gtcttaactc
     1321 agtcctgcat aagaatatga tttatagtat gcaaaaataa gacaggactt attaccagga
     1381 actataaaga ccaatcacta agatttttat tgtgttttat gaagaaacac ttaaatgtgt
     1441 gcagctattt tcttctgttg aaaagacttc gaaaatttaa aacatcatag taagtaatat
     1501 taaaactttt tgtccacact gatactgtgt acaaatgcct taattattga taagccaatg
     1561 tgttatgata ccaatatctc ttttttaaaa aaatcaaaag caaccatgcc tctggcataa
     1621 taaaatcatg gaattaaatc aggggtttac attcatgtag aatgttattg aaatatattc
     1681 gacaccattt tttttaaact tgtgaaattt ttagcctctc tgattttttt tttgccagaa
     1741 tcttcatgtt atgtttgtat gtatgtgtca ttcttatata aagaaaaaag gtgaatatgt
     1801 atttgtatga atgtttaact ggaaatgtcc agggagttgg ctaatttata ttcacttttt
     1861 attgtaaata gagttctaat atttttcatt tctgtaacat ttaaacttcc tttgagtaaa
     1921 tttactaaat atttctattt tttgcttttt taattctaat tttatatgag atctaaatgt
     1981 gttctgagaa gttccataca atgtttctga attgtttaca gttaatgctg acattgtatt
     2041 ttatgttcca acacagcgcg tcactacctc ctctaatggt tagtatgaaa tcccagcaaa
     2101 ctatatgcaa gcttttttgt gttttgtttt ttactatgac tatttgaaac atcagtgtac
     2161 tcacttctgg aatgtcttaa caatcgtacc tgtcttagac ggaattgcag ttaactacta
     2221 ctcctgttgg ccattcatcg tctttaataa ggcttgcaaa cttccagaaa agataagact
     2281 tcctcttcat atccaatgta cattttagaa ctcaaacagt gactactgag aagcctcccc
     2341 agcatctttt cttgctgtag agatgttgaa agtgttactt ttcactgaat tctgttttgt
     2401 atagctatta ctccagatat ctatgtatac cacagatgaa catccgttgt agtaattaat
     2461 tattatatca tcagataaga gtcactccag atgactgcgg ttttatgatt gtgaggtgag
     2521 gtatgtaaga agtcagtttt caggatgcag gaatttcata aatctccatc atcctgaaac
     2581 cttaagatga gaactacagc ctttctttct tcttagtcct ttagttttca ctgtcatatt
     2641 gaaccgtttg ggcaggttaa tgcggtttgg ttggagtgtg atgctaatga gactaaggat
     2701 ttgaatctga tccttctaaa ttcattaact tctcacatac acaaagaaat tccatggttt
     2761 ctggttgcat attttcttca atatccactc aataaattca atttgtgatc acaaagaaaa
     2821 aaaaaaaaaa aaaaaaaaaa a
//
