LOCUS       NM_001025009            2724 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus Josephin domain containing 1 (Josd1), mRNA.
ACCESSION   NM_001025009 XM_235482
VERSION     NM_001025009.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091280.1.
            
            On Jun 25, 2005 this sequence version replaced XM_235482.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091280.1, CB548306.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2724
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /note="Josephin domain containing 1"
                     /db_xref="GeneID:315134"
                     /db_xref="RGD:1305388"
     exon            1..387
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /inference="alignment:Splign:2.1.0"
     CDS             203..811
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /EC_number="3.4.19.12"
                     /note="josephin domain-containing protein 1"
                     /codon_start=1
                     /product="josephin-1"
                     /protein_id="NP_001020180.1"
                     /db_xref="GeneID:315134"
                     /db_xref="RGD:1305388"
                     /translation="MSCMPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNV
                     FQDSNAFTRETLQEIFQRLSPNTVVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWD
                     KRRDVGVIALANVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMP
                     EWIGGESELRKFLKYHLRGKNCELLLVVPEEVEAHQSWRADV"
     exon            388..516
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /inference="alignment:Splign:2.1.0"
     exon            517..711
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /inference="alignment:Splign:2.1.0"
     exon            712..2699
                     /gene="Josd1"
                     /gene_synonym="RGD1305388"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagaagaca gaaaaggtag actggtgggt tgggtttttt tgtccctttt ggttccaacc
       61 tttcctccca gtgacaaagc ataaatcatg gacaccagag agtaggtgaa cctcaggaat
      121 ctgaagacag aaacttagac tttcctcagg aggaaaggag cggggtgttt atcggctctg
      181 cctggaacct aaattgaaaa acatgagttg catgccatgg aaaggagaca aggccaaatc
      241 tgaatccttg gagcttcccc aggcagcacc cccacaaatc taccatgaga agcagcgcag
      301 ggagctctgt gcccttcatg ctctcaacaa cgtcttccag gacagcaacg ccttcacgcg
      361 ggaaacgctg caggagattt tccagaggct gtctccgaac actgtggtga cgccccacaa
      421 gaagagcatg ctgggaaatg ggaattatga tgtgaatgtc atcatggcgg cccttcaaac
      481 aaaaggatat gaagctgttt ggtgggacaa gcgcagggac gtgggtgtta ttgctcttgc
      541 taacgtcatg ggcttcatca tgaacctgcc ctccagcctg tgctggggtc cactcaagtt
      601 gcctctcaaa aggcagcact ggatctgtgt tcgtgaggtg ggaggggcct actacaacct
      661 tgactccaaa ctcaagatgc cagagtggat tggaggcgag agtgagctca ggaaatttct
      721 aaaataccat ttgcgaggta aaaactgtga actcctactg gtggtaccag aagaagtgga
      781 agcccatcag agctggaggg ccgacgtgtg acagacagtt ctgcctgacc ctctttgcct
      841 caaccctcca gacctctttg atgtgctgtg gcctctacag ttcacttccc caaacatctc
      901 attgggtttt cccttcagat tggccagtgc aataggacag atatgtggac tgtcagagcc
      961 acccagcagt ctgtgcctgg gggaagaagg taggagttct gaacacttag ggcaagacat
     1021 tgaacaccct ttgctgtttg aaagagggag ctgaaaaggg agtcatttga gggggcttgg
     1081 ttattttctc ctttctatga ggtcttgaca caggttctgc tggtagtgtt actgatgctt
     1141 caggctcaca gagaggctgc cccctttttt ctcctgtggc accatggggt ctgaggacaa
     1201 agtacatgca gagcccagtg accggctcaa aggacccaga gccaggaaac tgtgtctcag
     1261 gaaactgtca cgagtccagc aatggcactg catgccatct gcaatccatt atgccacctc
     1321 ttagcccttt ttaaatccca gccagccttg gagttttata acgaaaagtt ctgatattcc
     1381 aaagtaggta aattgcacag tattctagca agacaatggt gtaacgtata cctaatacaa
     1441 tgtgggtaaa accacagtag ggcagtcaat ggtggctctt cactctaatt atgtccctac
     1501 catttcacta cattgactag ggaggctctg gggcaaaaga caatgagcag ggatagcact
     1561 tatagttgac ccattttagc aaaatcagaa acacatctac cactgacatc aaattccata
     1621 gtttgggaca cagctgggtg aggaaactgc catgaaggta agcttcaggg tttgagactg
     1681 gtaggcacat cctgagctcc agggctgtgg cagcaatctc aggttggttg tatgcatcga
     1741 gctggagcct ctggttttgg cgtctgctat agtttctttt acaaacaggg ttggctcgct
     1801 ccacctcaag tagttctaga ccattttttt ctcctataat tttggaaaat gaggagaaat
     1861 aagtaccata cccccatacc aatgtgtttg tggtggcctt caaggcaggt gacctggcca
     1921 gcccttatca atccatggtc tctgtaggtc tgagagctgc cccactggcc tgcttctccc
     1981 tggcagcaga gctacctggg gcttgcatgt taatcctgag caagcttgtt ggggtgaagc
     2041 aggggctgtc tccccactgt gactggagtg catgtttaca ccagcacttt ttctgcacat
     2101 gtatcttcaa tccaacaagg ccgtttttta ttcaagtagc agaggcctca agtggctact
     2161 gcattgcgct cagccatggt catctgcacc attttctaca ccagatctgc ttggcaccac
     2221 ggggagctaa ctctgcccct gcacaatgac attccaatca ctaccagcca gaagttacag
     2281 ccgaccttgc tgattgtcac aagcaggacc ttggtccatt ggcactgtcg gtgagagtaa
     2341 gccatttctt gggaagagga gactcctccc tacagatctg cttgggcctt tgcaaatggc
     2401 actgcaaaca gtcccacgca cgtggagccc atgagctggt gggatgtata aagatgccta
     2461 agcatttcag ggctggttct gttcatatcc aattctggtg cttaggaaca gggacccatg
     2521 ttgatgccca agggcaaaaa gccccattcc tattaagggg catcctgacc ctgatgccca
     2581 gcaagggcaa ccctaggctt tgtttttctt gctttattcc ctttctttgt tggccttgtg
     2641 ctgggtttgt ttacaaagat gtattttgtt taaccaaata ttaaaaatga gaagctgaaa
     2701 aaaaaaaaaa aaaaaaaaaa aaaa
//
