LOCUS       NM_001107738            5206 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus ITPR interacting domain containing 2 (Itprid2),
            mRNA.
ACCESSION   NM_001107738 XM_001067501 XM_230036
VERSION     NM_001107738.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5206)
  AUTHORS   Inokuchi J, Komiya M, Baba I, Naito S, Sasazuki T and Shirasawa S.
  TITLE     Deregulated expression of KRAP, a novel gene encoding
            actin-interacting protein, in human colon cancer cells
  JOURNAL   J Hum Genet 49 (1), 46-52 (2004)
   PUBMED   14673706
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_230036.4, XM_001067501.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132262,
                              SAMD00132266 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5206
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..5206
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /note="ITPR interacting domain containing 2"
                     /db_xref="GeneID:311146"
                     /db_xref="RGD:1310767"
     exon            1..422
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     CDS             218..3985
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /note="sperm specific antigen 2; sperm-specific antigen 3"
                     /codon_start=1
                     /product="protein ITPRID2"
                     /protein_id="NP_001101208.1"
                     /db_xref="GeneID:311146"
                     /db_xref="RGD:1310767"
                     /translation="MNRPLSAEAEEELEWQVASRRRKAWAKCRSSWQASETEDLSTET
                     TTQDEDEDDEEDLPGAKLPAAAGRGNVPNEKIAIWLKDCRTPLGASLDEQSSVGPKGV
                     LLRNGGSFEDDLSLGAEANHLHEPDAQVENCNNILAKERRLQFHQKGRSMNSTGSGKS
                     SGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFARGIDIKVFL
                     SAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVTSTK
                     EAADCPPPLTRSNTANRLMKTLSKLNLCVDKTEKAEGSSTPAAEKGRSLSVSLSEDGG
                     GGKSDPKPQKVIKKKESSSMLATVTEEVSGSSSTITDSIDADRLSDEAESNISHKVES
                     EENGEAHSQNDALRQSAVTDPDFGHDGGSMSSLCELESSSELKSAQASSSEKEPCATL
                     TIPSIRNIMVQQKDSFEMEEVQSTEGEAPHVPATCQLSLAKSKRDHLLRTASQHSDSS
                     GFAEDSTDCLSLNHLQVHESLQAMGSSADSCDSETTVTSLGEDHVTPTAPDQPYFNES
                     EEESLASLQKGRAKVIVAEKRKADNQDFPHCATAENAGNNESVKGPCEPGPQITETET
                     EEEPPLAATGELLREGSGESDMDKGSECEFAQYTTHHILRSLTSFEEAQGSGMSSKKK
                     TEFPSSVDRVNTALQRAQMKVCSMSGQRVGRSLIKSKDLLKQRYFLAKAGYPLRRSQS
                     LPTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQELEKQVTEHDGQSLVK
                     STIFIPPSSVKKEEAPQSEGTRLEECHHGRLAPCPQFAPISQSTCSLHSVHSEWQDRP
                     LCEHMRTLSAHSVPNISGAACSAFSSPFGCPYSHRHAAHPCRPCPVNPPSAIEMQLRR
                     VLHDIRNSLQNLSQYPMTRGPDLAAAPYSTQKSSVLPLYENTFQELQVVRRSLNLFRT
                     QMMDLELAMLRQQTVVYPHMTEEDRYEVDQLQGLRNSVRMELQDLELQLEERLLGLDE
                     QLRAVRVPSPFRSSALPGMCGSRSADNLSCPSPLNVMEPVTELMREQSYLKSELGLSL
                     GDMGYEIPPGESSESVFSQATSESSSVCSSPSHTNRRSRGPSGSKPRARLVARKKIFR
                     ASVALTPTAPSRTGSVQTPPDLESSEEAGAAEEASQVVGLTSHVEEEPEDLSLMPTAE
                     EMHRNVEQDELQQVIREIKESIVGEIRREIVSGLLAAVSSSKASASKQDSH"
     exon            423..468
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            469..518
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            519..575
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            576..615
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            616..714
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            715..923
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1627
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            1628..1700
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            1701..1789
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            1790..3001
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3002..3079
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3080..3207
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3208..3358
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3359..3424
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3425..3880
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            3881..3999
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
     exon            4000..5206
                     /gene="Itprid2"
                     /gene_synonym="Ssfa2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccaggcca ggccgggttc acgtgaagcg ccagccctcg gcccctccct cccttccttc
       61 cctccccccc tccctgtccc ctcctcctga ggcgcccgct ctggctcccc cgggccccct
      121 gcccggctgg gcgctgacag cagcggcggg ggtccccgca gccgccgctg tgtcccgcgc
      181 aggctcgggc tgggcccgcg aagcccccgg cgcggccatg aaccgaccct tgtcggcgga
      241 ggcggaggag gaactggagt ggcaagtggc gagtcgcagg aggaaggcct gggccaagtg
      301 ccgcagctcc tggcaggcgt cggagaccga ggatctgtcc acagagacga cgacacagga
      361 cgaggacgag gacgacgagg aggacctccc aggcgcgaag ctgccggcag ccgcggggcg
      421 aggaaacgtg cccaacgaga agatcgcgat atggctcaaa gactgccgca ctcctttggg
      481 agcctcactg gatgagcaaa gcagcgttgg gcccaagggt gtgcttttga gaaatggagg
      541 aagctttgaa gatgacttgt cactgggagc tgaagccaat cacctacatg aacctgatgc
      601 tcaagttgaa aactgcaaca atatcttggc caaagagaga agacttcagt ttcatcagaa
      661 agggagaagt atgaattcca ctgggtctgg gaaaagcagt ggtactgtgt caagtgtttc
      721 agaactgctg gagctttacg aggaagatcc tgaagaaatt ctatataatc ttggatttgg
      781 acgagatgaa ccagatattg cttctaaaat tccttccaga ttttttaatt cgtcatcctt
      841 tgccagaggc atagacatta aagtgttttt gagtgcgcaa atgcagcgga tggaagtgga
      901 gaacccaaat tacgctctga caagccgttt tcgtcaaatt gaagtcctca ctactgtggc
      961 caatgcattt tcttctctgt attcccaagt ctctggaacc ccattgcaga ggattggaag
     1021 tatgtcctca gtgacctcca ccaaggaggc ggcagactgc cctcctcccc tgactcgaag
     1081 caacactgca aaccgtctga tgaaaacact ctcaaaacta aacttgtgtg ttgataaaac
     1141 agagaaagca gaagggagct ctacccccgc tgctgagaaa ggaaggagtc taagtgtttc
     1201 actgtctgaa gatggtggag gcggcaagag tgacccaaag cctcagaagg ttataaagaa
     1261 gaaggagtcc tcttcaatgc tggctacggt tacagaagaa gtctcaggca gttcctcgac
     1321 catcacagac agcattgatg ctgacaggct ttctgatgaa gcagagagta acattagcca
     1381 caaggtggaa agtgaagaaa atggagaagc tcacagtcag aatgacgcgc tccggcagtc
     1441 tgctgttaca gatcctgact ttggccatga cgggggcagc atgtccagcc tctgtgagct
     1501 ggagagcagc agtgagctga agagtgccca ggcgtcctcg agtgagaaag agccatgtgc
     1561 aaccctgaca atcccatcca taagaaacat aatggtgcag cagaaagact cctttgagat
     1621 ggaagaggtc cagagcacag agggagaagc acctcacgtg ccagccactt gccagctaag
     1681 ccttgccaag tcaaaaagag atcatctgtt gcgaactgca agtcagcatt ctgatagcag
     1741 cgggtttgct gaggattcca cagactgcct ctccctcaat caccttcagg ttcatgagtc
     1801 cctgcaagcc atggggagca gtgctgacag ctgcgacagt gaaacaactg tcacatcact
     1861 tggtgaagac catgtgactc cgacagcacc agaccagcct tacttcaatg aatcagagga
     1921 ggagtctctt gcctctctgc agaagggaag agcaaaggtc atagttgctg agaaaagaaa
     1981 agcagataac caagatttcc cccactgtgc gactgcagag aatgctggaa acaatgagtc
     2041 cgtgaagggt ccatgtgagc ctgggcctca gattacagag actgagacag aggaggagcc
     2101 acctctggca gccactggag agctcctgag ggaagggagt ggagagagtg atatggataa
     2161 gggcagtgaa tgtgaatttg cgcagtacac cacacaccac attctcaggt ccttgacttc
     2221 ctttgaagag gctcagggca gcggtatgag ctctaaaaag aaaactgagt ttccctcttc
     2281 tgtggacaga gtgaacactg ccctgcagag agctcaaatg aaggtttgca gtatgtctgg
     2341 tcagagagta gggcgtagcc taataaaatc aaaggatctg ttgaaacaaa ggtactttct
     2401 cgcaaaagct ggctatcctc taagaaggtc tcagtctttg cccaccactt tactgagccc
     2461 agtaagggtg gtatcttctg tcaatgtacg attatctcca ggaaaagaga ccaggtgcag
     2521 cccaccatcc ttcacctaca agtacacacc tgaagaggaa caagaattgg aaaagcaagt
     2581 aactgaacac gatggccagt ctttggttaa atctaccatc ttcatccctc catcctctgt
     2641 gaagaaagaa gaggcccctc agagtgaggg gacacgactg gaggaatgcc accatggaag
     2701 gcttgccccc tgcccacagt ttgctccaat ctcccagtcc acctgctccc ttcactctgt
     2761 ccactctgag tggcaggaca ggcctctgtg tgaacacatg agaactctga gtgcccatag
     2821 tgtccccaac atatcaggtg ctgcatgtag tgccttctcc tctccttttg gttgtcccta
     2881 ctcacataga cacgctgccc acccatgcag gccatgccct gtgaaccctc cttccgccat
     2941 agagatgcag ttgcggagag tgttacatga cattagaaac tcactacaga atctctcaca
     3001 gtaccctatg acgagaggac ctgatcttgc tgctgctcca tacagtactc agaagtcgtc
     3061 tgttctacct ctttatgaaa atacctttca ggagcttcag gttgtgagac ggagcctgaa
     3121 tctgttcaga acgcagatga tggacttgga gctggccatg ctgcgtcagc aaacggtggt
     3181 gtaccctcat atgacagagg aggacaggta tgaagttgat cagctgcagg gcctgcggaa
     3241 ctctgtccga atggagctgc aggacctgga gctgcagctg gaggagcgct tgctgggcct
     3301 ggatgagcag ctccgtgcag tgcgggtgcc ttcaccattc cgttcctctg cactcccggg
     3361 gatgtgtggc agtaggagcg ctgataactt atcatgcccg tctccactga acgtcatgga
     3421 gccggtcaca gaactgatgc gagagcagtc gtacctgaag tctgagctgg gcctgagcct
     3481 tggagacatg gggtatgaga ttcctcctgg agagagctca gagtccgttt tctctcaagc
     3541 tacatcagag tcatcttccg tctgctccag cccctcccac accaacagaa gatctagagg
     3601 gccatccggg agcaaaccca gagcccgctt agtggcgaga aagaagatat tccgagcctc
     3661 tgtggccctg acaccaactg ccccgtctag aacaggctct gtgcaaacac ctccagatct
     3721 ggagagttct gaagaagctg gagcagctga agaagcctca caagtcgtgg gacttacatc
     3781 tcacgtggag gaagaaccag aggatctctc tctgatgcca acggctgagg aaatgcaccg
     3841 gaatgtggag caggacgagc tgcagcaggt catccgcgag attaaagagt ctattgttgg
     3901 ggaaattaga cgagaaattg taagtggact tttggcagca gtgtcttcaa gtaaagcatc
     3961 tgcttctaag caggacagcc actgagtggg acatactcgg gttgggatgc attcccttag
     4021 cctacacagg tgttgttggt gatttatgct ggtgaaggtg tctgtcctat ggaagatatt
     4081 ttctactgag ctgggctact tacacagtgg actatgtgca tttctgtatg cagtgtacag
     4141 gttacggttc tatgcatcaa aattttaaaa aatatactta gaaacgtagg cactttgctg
     4201 actcatttct aaactatcag actggccatt tgaaagacta gtatttattt gtatgtcaat
     4261 atttttccag ttgatgtccc atgtagagtt aattgtaaaa cttgaagaat ccagacataa
     4321 ccgacttata aataacatat ttcttcagac tagcttctac aacactgacc tctatgaggt
     4381 atttactgtg caataacaga ttcgtctttt gagtgcttga agcaaccgat gattttttcc
     4441 tccactgctc ttcatggggt cacttctaag aagactaatg gttctgttgt aaagattgct
     4501 cttaattctc gaggaggcta ctgagaagca gtagggtaga tctcatgagg ttacctacaa
     4561 ctacttcatg ttcttacact gtaagcctgt tgctttgccc caacaaatgt aatttaatta
     4621 tagctatggg ccttctggta gacactgtac tctccgcgtt gtaactttat tatagctatg
     4681 tgccttgtgg taagcattat gtactctgcc ttgtccagat gtcttactct aaggtgttct
     4741 tctgtctttt agactaagta gtattgtcaa gataatgggg cctatgactt gaatggatag
     4801 aatagaaatg aataagctgg gttttgtttt tccaaatgag atttagattt gtttttctca
     4861 tgcataaatg attttaattc agttttaacc agtgaaagct catggttttc ttaaaacaaa
     4921 aacaaaaaaa caaaggttcc tatctgatac tatatatgtc aaataaatgt ataaagtagc
     4981 aaccaaatgt tattagaaat tagtctttta gtatttgtaa ttttcaactc cgattatgtt
     5041 actttgtgtg aaaattttta gtcaaaagtg cttggaaata attagcattc tttgaaagaa
     5101 tacctaaaaa gtttataaat atttgaacta tcacacaaag gctattctct aaaaaacaaa
     5161 aaccccatta aaacaataaa gtatttattt tgcctaaaat gttaaa
//
