LOCUS       NM_001025712            1597 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus integral membrane protein 2A (Itm2a), mRNA.
ACCESSION   NM_001025712 XM_228493
VERSION     NM_001025712.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Tai TS, Pai SY and Ho IC.
  TITLE     Itm2a, a target gene of GATA-3, plays a minimal role in regulating
            the development and function of T cells
  JOURNAL   PLoS One 9 (5), e96535 (2014)
   PUBMED   24831988
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099174.1.
            
            On Jul 22, 2005 this sequence version replaced XM_228493.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099174.1, FQ217144.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5756307,
                                           SAMEA5760383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1597
                     /gene="Itm2a"
                     /note="integral membrane protein 2A"
                     /db_xref="GeneID:317218"
                     /db_xref="RGD:1559423"
     exon            1..215
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..896
                     /gene="Itm2a"
                     /codon_start=1
                     /product="integral membrane protein 2A"
                     /protein_id="NP_001020883.1"
                     /db_xref="GeneID:317218"
                     /db_xref="RGD:1559423"
                     /translation="MVKIAFNTPTAVQKEEARQDVEALVSRTVRAQILTGKELRVVPQ
                     EKDSSSGRCMLTLLGLSFILAGLIVGGACIYKYFMPKSTIYHGEMCFFDSEDAVNSIH
                     GGQPYFLPVTEEADIREDDNIAIIDVPVPSFSDSDPAAIIHDFEKGMTAYLDLLLGNC
                     YLMPLNTSIVMTPKNLVELFGKLASGKYLPHTYVVREDLVAVEEIRDVSNLGIFIYQL
                     CNNRKSFRLRRRDLLLGFNKRAIDKCWKIRHFPNEFIVETKICQE"
     exon            216..347
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
     exon            348..545
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
     exon            546..656
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
     exon            657..807
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
     exon            808..1574
                     /gene="Itm2a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagacagtaa gtgctgctca agtagcgcga tcctctcctc ttccaacctg cagcccaagc
       61 tactgattcg agccgcgcct taccgcgctg cccgaagatt caccatggtg aagatcgcct
      121 tcaacacccc cacggcggtg caaaaggagg aggctcggca agatgtggag gcactcgtca
      181 gccgcactgt ccgagctcaa atcctgactg gcaaggagct cagagtcgtc ccgcaggaga
      241 aagatagctc gtctgggaga tgtatgctta ctctcttagg cctctcgttc atcttggcag
      301 gactgattgt tggtggagcc tgcatttata agtacttcat gcccaagagc accatttacc
      361 atggtgagat gtgcttcttt gactctgagg atgctgtaaa ttccattcat ggaggacagc
      421 catactttct gcctgtgact gaggaagccg atattcgtga ggatgacaac atcgcaatca
      481 ttgacgtgcc cgttcccagt ttctccgaca gtgaccctgc ggcaattatt cacgactttg
      541 agaagggaat gactgcttac ctggacttgc ttttgggaaa ctgttacctg atgcccctca
      601 acacttccat tgtgatgact ccaaagaatc tggtggagct ttttggcaaa ctggcaagtg
      661 gcaagtattt gcctcatact tatgtggttc gtgaagacct ggttgctgtg gaagaaattc
      721 gtgatgttag taaccttggt atttttattt accaactttg caacaaccga aagtccttcc
      781 gccttagacg cagagacctc ctgctgggtt tcaataagcg tgccattgac aaatgctgga
      841 agatcagaca cttccccaat gaattcatcg tcgaaaccaa gatctgtcaa gagtgaagag
      901 tgacagataa agagtatcct tggtaataag aagtcagaaa cttgccgtct gactttgata
      961 ttgaaattga tgggatactc aagctattta cccatacatt tactccattg cttatactgg
     1021 aaaaggaaag gggggagaaa actactaacc actgcaagcg attgtgcaat tctagttcaa
     1081 ttgacattgc ttgctgtttt caacaaatga aatgattatc ttttctcttg aatttatagg
     1141 gtttagattt ctgaaagcag catgaatgtg tcatcttact ctcctgacaa aaaatcccat
     1201 tctctggtgt tatttaaagc atgttcttaa caaaaatcat ttcatgcttt aaattgaaaa
     1261 tatttgaaat ttgttcttga catttttgtg tgaagcatgt caaagctctt accgttctct
     1321 tgttttcttc ttcattgtgt tcaactctcc tgatttcaga agttacattt ttgcatttct
     1381 atcaggtgct gtgtaacgaa tctgactgat atgtgaacaa tcttcatgag aaagcaattt
     1441 ttttactcat gtaatgattc tttctcactg atatctgtat tgtgaaatcc acagaactgt
     1501 acgggtgctg aatgctgtaa ggagctctgg ttgtatgaat tctacaaccc tataataaag
     1561 tttaccatat tcaaaaaaaa aaaaaaaaaa aaaaaaa
//
