LOCUS       XM_001063315            3696 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus integrin subunit alpha 2b (Itga2b),
            mRNA.
ACCESSION   XM_001063315
VERSION     XM_001063315.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 9, 2024 this sequence was replaced by
            NM_001427035.1.
            
            On Jan 21, 2021 this sequence version replaced XM_001063315.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3696
                     /gene="Itga2b"
                     /note="integrin subunit alpha 2b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 59 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:685269"
                     /db_xref="RGD:1596428"
     CDS             411..3524
                     /gene="Itga2b"
                     /codon_start=1
                     /product="integrin alpha-IIb"
                     /protein_id="XP_001063315.1"
                     /db_xref="GeneID:685269"
                     /db_xref="RGD:1596428"
                     /translation="MARASCAWNTLWLLQWTPLFLGPSAAPPAWALNLDSVKFSVYTG
                     PNGSHFGFSVDFHKDSHGSVSIVVGAPRALNANQEETGGVFLCPWKANNGTCTSLLFD
                     LRDETRKLSLQTFQTFKTGQGLGASVLSWNDVIVACAPWQHWNVLEKYDEAEKTPVGG
                     CFVAELQSGGRAEYSPCRSNTMSSVYSQGFSGDKRYCEAGFSLAVTQAGELVLGAPGG
                     YFFLGLLVRVPIENIISSYRPGTLLWHVSNQRFSYDSSNPVYFHGYRGYSVAVGEFDG
                     DLSTTEYIFGAPTWSWTLGAVEILDSYYQTLHRLHGEQMASYFGHSVAVTDVNGDGRH
                     DLLVGAPLYMESRVDRKLAEVGRVYLFLQPKGLQALSSPTLVLTGTQVYGRFGSAIAP
                     LGDLNRDGYNDVAVAAPYGGPSGQGQVLIFLGQSEGLSPRPSQVLDSPFPTGSGFGFS
                     LRGSVDIDDNGYPDLIVGAYGASKVAVYRAQPVVMATVQLMVQDSLNPTLKNCVLEQT
                     KTPVSCFNVQMCVGATGHNIPQKLHLKAELQLDLQKPRQARRVLLLASRQASLTLSLD
                     LGGRNKPICHTIKAFLRDEADFRDKLSPIVLSLNVSLPPEETGVAPAVVLHGVTHVQE
                     QTRIILDCGEDNLCVPQLQLTATAGDSPLLIGADNVLELKVNASNDGEGAYEAELAVH
                     LPPGAHYIRAFSNVKGFERLVCTQKKENESRLALCELGNPMKKDTRIGITMLVSVEIL
                     EEAGDSVSFQLQIRSKNSQNPNSEAVLLPVAVRAEAAVELRGNSFPASLVVAAEEVDK
                     EQDGLDSWVSRVEHTYELHNNGPGTVNGLSLIIHLPGQSQPSDLLYILDVQPKGGLLC
                     STQPPPKLLKVDRRLTTPSPSSIRRIHHDRDRREASPQGSKQTEQQDPVLVSCNGSAP
                     CTVVECELQEMVRGQRAMVTVQATLGLSILRQRPQEQFVLQSHAWFNVSSLPYSVPVV
                     SLPSGQGLVQTHLLRALEERDIPVWWVLVGVLGGLLLLTLLVLAMWKAGFFKRNRPPL
                     EEEEEEE"
ORIGIN      
        1 acaaggacag tacaaccgtg ggccgtggtg aagtaagaca gagctgtgaa ttcatgttta
       61 cactttcccg ggcggaaaga gatggtggcc tgactttcac agtgacagag gaggagaaag
      121 gggatttctg ggcctgtggc tgagaaactg aaactacagg acttggagag gagcttttct
      181 ggagagaagg gagaagcaat gacttccggt catcagcacc tatccccggg acagaccctc
      241 cctttcctag tagtcctaga gaccgtgtgg tccagaggct attcccctct gccatgcctg
      301 ctgctaagcc atgagctcca gtctgataag ccgaaacttc cggtggtggg gacttgaggg
      361 aaggggaaga gcttgaccat tcctgcttag gacatttggg gagaaggaag atggccagag
      421 cttcatgtgc gtggaatacc ctgtggcttc tgcagtggac accactgttc ctgggaccaa
      481 gtgctgctcc tcctgcctgg gccttgaacc tggactctgt gaagttctct gtctatacag
      541 gccccaatgg cagccacttt ggcttctcag tggactttca taaggacagc catgggagcg
      601 tgtccatcgt ggtgggcgcc cccagggccc taaacgcaaa tcaagaggag actggaggtg
      661 tgttcctgtg cccctggaag gccaataacg gcacatgtac ctcgttgctt ttcgacctca
      721 gggatgagac gcgaaaacta agcttgcaaa ctttccaaac cttcaagacc gggcaaggac
      781 ttggggcatc ggtcctcagc tggaatgacg tcattgtggc ctgtgccccc tggcagcact
      841 ggaatgtcct agaaaagtac gatgaggcag agaagactcc ggtaggaggc tgcttcgtgg
      901 ctgagctcca aagcgggggc cgcgcagaat actcgccctg tcgctccaac accatgagct
      961 ccgtttactc acagggtttt agcggagaca agcgatactg tgaagcaggc ttcagcttgg
     1021 cggtgaccca ggctggggag ctagtgcttg gggcccctgg aggctacttt tttttaggtc
     1081 tcctggttcg cgttccaatt gagaatatca tctctagcta ccgccccggt acccttttgt
     1141 ggcatgtttc caaccagcgc ttctcctacg actccagcaa cccagtgtat ttccacggtt
     1201 accgggggta ttcggtagct gtgggcgagt tcgacgggga tctaagcacc acagagtata
     1261 tattcggagc ccccacttgg agctggacct tgggagcggt ggaaattttg gactcctact
     1321 accagaccct gcacaggctt catggagagc agatggcttc ctatttcggg cactcggtgg
     1381 cagtcactga cgtcaacggg gatgggaggc atgacctact ggtgggggct ccattataca
     1441 tggagagcag ggtggaccga aagctggccg aggtgggccg tgtatacttg tttctgcagc
     1501 ctaagggtct ccaggctctg agctcaccca ctctcgtgct gaccggcact caggtgtatg
     1561 ggagatttgg atctgccatt gcacccctgg gtgacctcaa ccgagacggc tataatgatg
     1621 ttgctgtggc tgccccctat gggggtccca gtggtcaggg ccaagtgctg atattccttg
     1681 gtcagagtga agggctgagc ccacgcccct cccaggtcct ggacagtccc ttcccgacag
     1741 gctctggctt tggcttctcc ctccgtggtt ctgtagacat cgatgacaat ggatacccag
     1801 acctgatcgt gggagcatat ggggctagca aggtagctgt gtacagagct cagcctgtgg
     1861 tgatggccac tgtccaactg atggttcaag actctctgaa tcccacactg aagaactgtg
     1921 tcctggagca gaccaagaca ccagtcagct gcttcaacgt ccagatgtgc gtgggagcca
     1981 caggacacaa cattccccag aagcttcacc taaaggcaga gctgcagctg gacctacaga
     2041 agccccgtca ggcccgccgg gtgctcctgc tggcctctcg acaggcgagc ctcactctga
     2101 gcctggacct gggtggaaga aacaaaccta tctgccacac catcaaggcc ttccttcgag
     2161 atgaggccga cttccgggac aagctgagcc caattgtgct aagcctcaat gtgtcgctgc
     2221 ccccagaaga gactggagta gcccctgctg tggtgttgca tggagtaacc catgtccagg
     2281 agcagacacg gatcatcctg gactgtgggg aagacaacct gtgcgtgccc cagctccagc
     2341 tcacagccac cgcgggggac tccccactcc taattggtgc tgacaatgtg ttggagctga
     2401 aggtcaatgc atccaatgat ggcgaggggg cctatgaggc agagctggct gtgcacttac
     2461 ccccgggtgc ccactacatt cgggctttca gcaacgttaa gggctttgag aggctcgtgt
     2521 gcactcagaa gaaggagaat gagtccaggc tggcactttg tgagctgggc aaccccatga
     2581 aaaaggacac tcggatagga atcacgatgt tggtgagtgt ggagatcctg gaagaagctg
     2641 gagattctgt gtccttccag cttcaaatca ggagcaagaa cagccagaat ccaaacagtg
     2701 aggctgtgct gttgcctgtg gcagtccgag ctgaagccgc agtggagctt cgagggaact
     2761 ccttccctgc ctccctggtg gtggcagcag aagaagttga caaggagcag gatggtttgg
     2821 acagctgggt ctccagggtg gaacacacct atgagctcca caacaatggc cctggcactg
     2881 tgaacggcct cagtctcatc atccaccttc ctggccagtc ccagccctca gatctgctct
     2941 acatcctaga tgtgcagccg aaggggggtc tcctttgctc cacacagccg ccccccaagc
     3001 tcctcaaggt ggaccggagg ctaaccactc ccagcccttc ttccattcgc cggatccatc
     3061 acgaccggga ccgcagagag gcatccccgc aggggtccaa gcagacggag cagcaggacc
     3121 cagttctggt gagctgcaac ggctcagcgc cctgtacggt ggtggagtgt gaactgcagg
     3181 agatggtgcg cgggcagcgg gccatggtca cggtgcaggc cacgctgggg ctgtccatcc
     3241 tccgccagag gccccaggag cagtttgtgc tgcagtcgca cgcctggttc aacgtctcct
     3301 ccctaccgta ctcggtgccg gtggtcagct tgcccagcgg gcaaggtctg gtgcagacac
     3361 atctgcttcg ggccttggag gagagggaca tccctgtctg gtgggtgctg gtaggcgtgc
     3421 tgggcggtct gctgctgctg accctactag ttttggccat gtggaaggct ggcttcttca
     3481 agcggaatcg accacctctg gaggaagagg aagaggaaga atgacagcag ggtgagggtg
     3541 ggggctggtg agaaggccaa gtacctgttt tttctttgca gccagttgcc tctgctcaga
     3601 actccacggg ttcgaaccat ggggtcctcc ctttctagca gaccaggtgc atcccttttt
     3661 tctttttcct aataaagagt ttgccttcaa catcca
//
