LOCUS       XM_345156               7314 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus integrin subunit alpha 2 (Itga2),
            mRNA.
ACCESSION   XM_345156
VERSION     XM_345156.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 18, 2024 this sequence was replaced by
            NM_001427291.1.
            
            On Jan 21, 2021 this sequence version replaced XM_345156.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7314
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7314
                     /gene="Itga2"
                     /note="integrin subunit alpha 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 13 ESTs, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     17 samples with support for all annotated introns"
                     /db_xref="GeneID:170921"
                     /db_xref="RGD:621632"
     CDS             161..3697
                     /gene="Itga2"
                     /codon_start=1
                     /product="integrin alpha-2"
                     /protein_id="XP_345157.5"
                     /db_xref="GeneID:170921"
                     /db_xref="RGD:621632"
                     /translation="MGPGQAGGALLLQLLLLTQGLLSCLAYNVGLPGAKIFSGSSSEQ
                     FGYSVQQLTTPQGNWLLVGSPWSGFPDNRMGDVYKCPVDLPTATCEKLNLQNSASISN
                     VTEIKTNMSLGLTLTRNPGTGGFLTCGPLWAHQCGNQYYATGICSDVSPDFQSLTSFS
                     PAVQACPSLVDVVVVCDESNSIYPWEAVKNFLEKFVQGLDIGPKKTQVALIQYANDPR
                     VVFNLTTYKNKEDMVQATSETRQYGGDLTNTFKAIQFARDIAYLPESGGRPGATKVMV
                     VVTDGESHDGSKLQTVIQQCNDDEILRFGIAVLGYLNRNALDTKNLIKEIKAIASTPT
                     ERYFFNVADEAALLEKAGTLGEHIFSIEGTVQGGDNFQMEMAQVGFSADYSPQNDILM
                     LGAVGAFDWSGTVVQETSYEHLIFPKQAFDQVLQDRNHSSFLGYSVAAISTENGVHFV
                     AGAPRANYTGQIVLYSVNKHGNVTVIQSHRGDQIGSYFGSVLCSVDVDKDTITDVLLV
                     GAPMYMNDLKKEEGKVYLFTITKGVLNQHQFLEGPEGTGNARFGSAIAALSDINMDGF
                     NDVIVGSPVENENSGAVYIYNGHQGTIRTKYSQKILGSDGAFKSHLQFFGRSLDGYGD
                     LNGDSITDVSIGALGQVVQLWSQSVADVATEASFTPDKIILLNKEAKITLKLCFRAKF
                     RPPGQNHQVAILFNMTLDADQYSSRVTSRGIFRENSERFLQKTMVVSEVENCSEYHIS
                     IQKPSDVVNPLDLRVDISLEKPGTSPALEAYSETVKVFSIPFYKECGSDGICISDLIL
                     DVRQLPALRNQPFIVSNQNKRLTFSVTLKNRGESAYNTAVLAEFSENLFFASFSMPVD
                     GTEVTCQIGSSQKSVTCDVGYPALKSEQQVTFTINFDFNLQNLQNQAAINFQAFSESQ
                     ETNKADNSVSLIVPLLYDAELHLTRSTNINFYEISSDENAPSVINSVEDIGPEFIFSL
                     KITAGSAPVSMASVTIHIPLHTKEKNPLLYLTGIQTDKAGDISCRAEINPLNLPHTAS
                     PVSFKSENFRHMKELDCKTTSCSNVSCWLKDLHMKAEYFINVTTRVWNRTFAASTFQT
                     VQLTAAAEIDTHNPQLFVIEENAVTIPLMIMKPTEKAEVPTGVIIGSIIAGILLLLAM
                     VAGLWKLGFFKRQYKKMGQNPDETDETTELNS"
ORIGIN      
        1 tcctagctca ggagctgcaa gcaacttttc cttgctctct ttcaggctgg agagaagtcc
       61 tcccgtacag cttctggaaa gtctagcttc tgggagccct gggccaaggg tactgtgcgc
      121 acccccaaaa gcactttaga ttccccagcg cagacccgag atgggaccgg gacaggcagg
      181 gggcgcgctt ctgctgcagc tgctactgct cactcaaggt cttttgagtt gtctggcata
      241 taatgttggc ctcccaggag cgaaaatatt ttctgggtct tcaagtgaac agtttggcta
      301 ttcggtgcag cagcttacga ccccacaagg caactggcta ctggttggtt cgccatggag
      361 tggcttccct gacaaccgaa tgggagacgt gtacaagtgc cctgttgact tacccactgc
      421 cacctgtgaa aagctgaatc tgcaaaattc agcaagcatc tcaaatgtta ccgagataaa
      481 gaccaacatg agcctgggtt tgaccctcac caggaatccg gggaccggcg gctttctaac
      541 ctgcggtcct ctgtgggcac atcagtgtgg aaatcagtat tatgcaactg gaatttgttc
      601 tgatgtcagt ccagactttc agtcgttgac aagcttctca cctgcagttc aagcttgccc
      661 ttccctcgta gatgtcgtag ttgtctgtga tgaatcaaac agtatttatc cctgggaagc
      721 agtaaagaat tttttggaaa agtttgtgca aggcctggat ataggaccta aaaagacaca
      781 ggtggcgtta attcaatatg ccaacgaccc aagagttgtc tttaacttga ccacttacaa
      841 aaacaaagaa gatatggttc aggccacatc cgagacgcgc cagtatggtg gggacctcac
      901 aaacaccttc aaggctatcc aatttgcaag agacattgct tatttaccgg agtctggcgg
      961 gcgcccaggt gctacaaaag tcatggtagt tgtgactgat ggggaatccc atgatgggtc
     1021 gaagctgcaa actgtgatcc agcaatgcaa tgatgacgag atactgaggt ttggcatagc
     1081 ggttcttgga tatttaaaca gaaatgctct tgatactaaa aatctaatca aagaaattaa
     1141 agcaatcgct agcactccaa cggagaggta ctttttcaat gtggccgatg aggcggctct
     1201 tctggagaaa gctggcactc taggggagca catattcagc attgaaggca ctgttcaagg
     1261 aggagacaac ttccagatgg aaatggcaca agttggattc agtgcagatt actctcctca
     1321 aaatgatatc ctgatgctag gtgcagtggg agcttttgac tggagtggaa ctgttgtcca
     1381 ggagacatct tacgagcact tgatctttcc taaacaagcc tttgaccagg ttctgcagga
     1441 tagaaatcac agttcatttt taggttactc tgtggctgca atttctactg aaaatggtgt
     1501 ccactttgtt gctggtgctc ctcgagcaaa ttatactggc cagatagtgc tgtacagtgt
     1561 taacaagcat ggcaatgtga ccgtgattca gtctcacaga ggggaccaga ttggctccta
     1621 ttttggcagt gtgctgtgtt cggtggatgt ggataaagat accattacag atgtgctctt
     1681 ggtaggtgct cccatgtaca tgaacgacct caagaaagaa gaagggaaag tctacctgtt
     1741 cacaatcaca aagggcgtcc tgaaccagca ccagtttctt gaaggacctg aaggcactgg
     1801 aaatgctcgg tttggttcag caattgcagc cctttcagac atcaacatgg atggctttaa
     1861 tgatgtgatt gttggttcgc ctgtagagaa tgagaactct ggagctgtgt acatctacaa
     1921 tggccaccag ggtaccattc gcaccaagta ctcccagaaa atccttggat ccgacggagc
     1981 ctttaagagc catctccagt tctttggaag gtccctggat ggctatggag atttaaatgg
     2041 ggactccatc actgatgtat ccattggtgc tttggggcaa gtggttcaac tctggtcaca
     2101 aagcgttgca gatgtggcca cagaagcttc gttcactcca gacaaaatca tattgctcaa
     2161 caaggaagct aagataaccc tcaaactctg cttcagagca aagtttagac ctcctgggca
     2221 aaaccaccaa gtggccatcc tgtttaacat gacacttgat gctgaccaat attcatccag
     2281 agtaacctcc agggggatat ttagagaaaa tagtgagcga ttcttgcaga agactatggt
     2341 tgtaagtgaa gtggagaact gttctgagta ccacattagt atacagaagc cctctgatgt
     2401 tgtcaaccct ttggatctgc gagtggacat cagtttggaa aagccaggca ctagccctgc
     2461 ccttgaagcc tattcagaaa ctgtgaaagt cttcagtatc cctttctata aagagtgtgg
     2521 cagcgatgga atttgcatct ctgacctgat cctggatgtc cgacagctgc cagcccttag
     2581 aaatcagccc tttattgtca gtaaccaaaa caagaggtta acattttcag tcacactgaa
     2641 aaacagaggg gaaagcgcgt acaacactgc cgtcctggct gagttttctg agaacttgtt
     2701 ttttgcctct ttctccatgc cggtcgatgg aacagaagta acatgccaga ttggttcatc
     2761 acagaaatct gttacctgtg acgtgggata ccctgcctta aagagtgagc agcaggtgac
     2821 ttttaccatt aacttcgact tcaatcttca gaacctccag aatcaggcgg ccatcaattt
     2881 ccaagccttc agtgagagcc aagaaacaaa caaagcagac aattcggtca gcctcatagt
     2941 tcctctcctg tatgacgctg aacttcactt aaccagatcc accaacataa acttttatga
     3001 aatctcttcg gatgagaatg ctccttctgt cataaacagt gttgaagata ttggtcctga
     3061 attcatcttc tctctcaaga taacagcggg aagtgctcca gtgagcatgg catcagtaac
     3121 catccacatt cctctgcaca ccaaggaaaa gaacccactc ctgtatctga ccgggataca
     3181 aacagacaag gctggcgaca tcagctgcag agcagaaatt aatccactaa acttaccaca
     3241 cacggcctca cccgtatctt tcaagagtga aaacttccgg catatgaaag aattggactg
     3301 caaaaccact tcctgcagta acgtctcctg ctggctgaaa gaccttcaca tgaaagcgga
     3361 gtactttatc aatgtgacta ccagggtttg gaacaggacc tttgctgcat caactttcca
     3421 gactgtgcag ctgacagcag cagccgagat cgatacgcat aaccctcagc tcttcgtgat
     3481 tgaagaaaat gctgtcacga ttcccctcat gataatgaaa cccaccgaga aagcagaagt
     3541 gcccacagga gttatcatag gaagcataat tgctggaatc cttttgctgt tggctatggt
     3601 tgcaggcttg tggaagctcg gcttcttcaa aagacaatat aaaaaaatgg gccaaaatcc
     3661 agatgagacg gacgagacca cagaactcaa cagctaaacc atcggcaggc acaactgtgt
     3721 gggggctatc ggcatcctgg agagagtccg ctggtgtaat gaatggattt cttttaaatc
     3781 cacttttaaa taatttaata ggtaaactag cccgatcatt ttagagtatc tgctggtcag
     3841 ttggagatga caaaattgtg ggtggtggtt aggggtagaa aggccaaagg catcacatag
     3901 gaaggaaaaa agttatcttt agactggcta gtccagtgtt tacctttcat caggaagaca
     3961 gaatgcttct aggcatgaca aaccttcaag aagattgaaa tgtttttcaa atttgggagt
     4021 gagaaagtgc atgggaatgc tctttttaat ttgattaaca gtaacagtga aagtggaaag
     4081 tacctggtgt gtatattata cataatatat atgttatata ttatccatat agcatatata
     4141 ttatacatat ataatcgaca taaatcatat agtagatcat atgtttatag gtatgtatat
     4201 atgtatatgt ataaatgagt actttctgca gatataacta tattaatatt ataatgaata
     4261 tgaacgtttg ttgacaagag cgaaaaccag catagattgc ttttcaattt atgctgctca
     4321 tcaaaggatg ccacagggat atttttaagt ggtaatctta tttattaact aagttaaaaa
     4381 taaagtcctc ctattgcagg acagtaatct cagctactac tcaggaagct gagacaggac
     4441 ttaagagtct gaggtctccc tgagcagcct ctttttaaaa agcaggtaga acacatgctt
     4501 tctttcagcc cttttatgcc tcttctgagt cctatcttac tatgaacatg cttgaaatgc
     4561 ttgaataacc aagagaaaca cacacacaca cacacacaca cacacacaca cgcacgcacg
     4621 cacgcacacg cagataaata taccacctac taaagaaacc tctacagaca ttgagctggg
     4681 gtaggtttaa aaaccaaggc accaaaattg acttgtaacc tatagcaaat ttatagtata
     4741 actgtctgct gtgggccatc cttgcctaag gggggggggc tttctttcct tttaggaatc
     4801 acaagaattc tcttttaatc gattagatat ctgggagaga cctagtgtat cttttgcaag
     4861 ctgcctccct aaccactccc ctttcctgct gcctttatga caaaggctgt ggcctgcttt
     4921 tctcttcagc cattacctcc tttcctttcc ccaccattca catctcctac agcatgaata
     4981 ccaaccctga cacactaccc caagtgttgg aaggagaatg tcctctgttt agttcacgca
     5041 tctgtgtgat tttacactcc ttaactttag ggggccattt tcatttgctg ctaaacaagt
     5101 aattaagcca cgcctgaatt tgttaccgat acaaaaagaa aaaagtgact ggaaaggctc
     5161 aggatttgag agcagcagaa accactaact tagcactaac tatgcttgat tcggggggta
     5221 caactgttca gccctaactc ctgaagctct gtcgtgacag aaggccagcc agcctgcatt
     5281 ttgacaagtt cttggtcctt gtaaacactg cactccaggg aggaggtctt ttcctcccat
     5341 ttgctcctat tgctgagact atacagtctc tagaagagag tgggtgggag agcagggttc
     5401 aggcacagct gtggaactcc ctttgtcaca cactatatac aaaaggctct agcctgggcc
     5461 ctaacctcta ggagcttcat tgttcttctt aggaaagagg aagttaggct tagggctagg
     5521 cagggactcc aacttaaagg ccacccttaa ggatttcctg ctctacaacc tctaagaata
     5581 agacctaggg ataacagagg aaaaccaact tgttcatgtg tgtgtggatg gatggccttg
     5641 actgcccttg tgccaggccc ctgggtggca gtccagagct ccttgaacca cttagtggct
     5701 cacttcagcc ttagtaaagc caaataaaga aggaaaaaaa atatattagc tgtaacagtc
     5761 agggaggtac agcaaaaaca gattagtact ttgagttaca tgatccagat tccttcaatc
     5821 cctacagatt catcattcta acgaagtttt aaagggtgca gaaaccagtc atgcggttgc
     5881 tagagaatat ttcacacagc atgttaattt attgcacact tgtgtatatg tgcacggtgt
     5941 gtgctgggtt acaacagaga cttagacaca gtcctgaaac ccatttccca ccctacccac
     6001 tgggctttag agcttggcag tattgtcatt ttgaaacaga cagtttagga gggaaggggc
     6061 tgcctcgtgc tttacaaggt tttaaggagc catgcctggc ttctactgac tcctcccatg
     6121 gccttgacaa taacaaatgt ccccaggttt taccaaatga ctcctgtagt tttcaggaat
     6181 tttaagcaaa gatgagtgtt cttaaggaat cattgggggc caggtaggtg gtgttggaga
     6241 ggaaaatatg tggtccattc aaccatattt ttgatttaac tgaactacag gattcaaaga
     6301 tggcagggta aaacatacat ttcataagtg gtagatcaca aaatatgacc ttaaaaacct
     6361 gaattgcttc ttgcctggcc actacacaac tctacaaaga gcagcaggac gaattagtgt
     6421 aataaagaaa ctgaactcac ttaaaataca caccactcat ttcagcagca aactacggac
     6481 gtctaactga acgttagacg ttagcagtgt tatttttata tgacagtgaa acttgccttt
     6541 ttaactgtga agagtaaaga catctaaggt caattcatga caaacacaaa agcgattatt
     6601 ctaaactata aaggatgatg tcattttgta tctatcctga cacatagctg aacccaacat
     6661 gtgaaaatct cattaagatt tcactaaacg gaagacagga tcctcagctg agctccctca
     6721 tttatctcct tgtacacaaa gaacaattgc acacacagtc tcctaggcca cccccttcat
     6781 gtacctttca ggaggtacat cagcatcatc gtcctcagca gaaaagagta aacatccaga
     6841 gacgaaagat aaacatgagg gaaagttgga agtacaatat ttacgacttt gaattttaaa
     6901 gtataaagac atagtcatca tgtaaatata tagattgtat tgtttgtact tggttttggc
     6961 aaacgaagct gaaacataaa tgtatatatt gcacaactgt attagaactg tcttattttt
     7021 taaagaggga actgtcctat ttccttctca tgtgatgagt aatcttggta agatgtaatg
     7081 cttgctggtt ttaattaaac gtgttttgtc attttttttt tctctccacc aaaagtatat
     7141 aagatgaatg tatttgcttg tacaccaact tggtgaattt atttgacttc ttaaaaacaa
     7201 tcaaattgta gtaatcaatg taaataaaag cagaagaacc agacagaaac gttgtattta
     7261 actgtaaatc atccttttca taccctgtta aatattaaaa ttgttttgac agta
//
