LOCUS       NM_001014016            1760 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus immunity related GTPase cinema (Irgc), mRNA.
ACCESSION   NM_001014016 XM_218443
VERSION     NM_001014016.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079061.1.
            
            On Apr 20, 2005 this sequence version replaced XM_218443.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079061.1, CK600500.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1760
                     /gene="Irgc"
                     /gene_synonym="Ifgge; Irgc1; RGD1311107"
                     /note="immunity related GTPase cinema"
                     /db_xref="GeneID:308428"
                     /db_xref="RGD:1311107"
     exon            1..176
                     /gene="Irgc"
                     /gene_synonym="Ifgge; Irgc1; RGD1311107"
                     /inference="alignment:Splign:2.1.0"
     exon            177..1709
                     /gene="Irgc"
                     /gene_synonym="Ifgge; Irgc1; RGD1311107"
                     /inference="alignment:Splign:2.1.0"
     CDS             233..1624
                     /gene="Irgc"
                     /gene_synonym="Ifgge; Irgc1; RGD1311107"
                     /note="immunity-related GTPase cinema 1; immunity-related
                     GTPase family, cinema 1; interferon-gamma-inducible GTPase
                     Ifgge protein"
                     /codon_start=1
                     /product="interferon-inducible GTPase 5"
                     /protein_id="NP_001014038.1"
                     /db_xref="GeneID:308428"
                     /db_xref="RGD:1311107"
                     /translation="MATSRLPAVPEEETTILMAKEELEALRTAFESGDIPQAASRLRE
                     LLATTETTRLEVGVTGESGAGKSSLINALRGVGAEDPGAALTGVVETTMQPSPYPHPQ
                     FPDVTLWDLPGAGSPGCSADKYLKEVDFGRYDFFLLVSPRRCGAVETRLASEILRQGK
                     KFYFVRTKVDEDLAATRNQRPSGFSEAAVLQEIRDHCAERLRAAGLSDPRIFLVSNLS
                     PNRYDFPMLVTTWEHDLPAHRRHAGLLSLPDISLEALQKKKDMLQEQVLKTALVSGVI
                     QALPVPGLAAAYDDALLIRSLRGYHRSFGLDDDSLAKLAEQVGKQAGDLRSVIRSPLA
                     NEVSPETVLRLYSQSSDGAMRVARAFERGIPVFGTLVAGGISFGTVYTMLQGCLNEMA
                     EDAQRVRIKALEEDETQGEVSLEAAGDNAVEKRSSGEGTSEEAPLSTRRKLGLLLKYI
                     LDSWKRRDLSEDK"
ORIGIN      
        1 gtgaggggag agggagagcc tgcagggcag gtgagtccct gaggggccag gctctccagc
       61 tgggccctgc gggtcagtgc atagagaccc aggcttccac aagtccccat cccgaccctg
      121 tcacctctta ctgttctgcc actagctgct gggacctgtc ccaggtcaca tctgagccac
      181 tgaggagtca catcctgtga ctgtccccca tcttcctgcc cagctctgaa ccatggcaac
      241 ttccaggttg cccgcggtgc ctgaggagga gaccaccatc ctcatggcca aggaagagct
      301 ggaggccctg cgcacagcct ttgagtctgg cgacatccct caggccgcct ctcgccttcg
      361 ggagctgctg gccaccacgg agaccacccg gctggaagtg ggcgtcacgg gcgagtcggg
      421 agccggcaag tcctccctca tcaatgccct gcggggagtg ggggccgagg atcctggtgc
      481 agctctcact ggggtcgtgg agaccaccat gcaaccttca ccctacccgc acccacagtt
      541 tcccgacgtg accctgtggg acctgcccgg ggccggttct ccaggctgct cagcagacaa
      601 gtatctgaag gaggtggatt tcggccgcta tgacttcttc ttgctcgtct ccccccgccg
      661 ctgtggcgca gtggagaccc gcctggcttc cgagatcctg cgccagggga agaagtttta
      721 ctttgtgcgc accaaggtgg acgaggatct ggcggccacc cgcaaccaga ggccctcggg
      781 cttcagcgag gccgccgtcc tccaggagat ccgggatcac tgcgcggagc ggctgcgggc
      841 agcgggcctg agtgatcccc gcatcttcct ggtgtccaac ctgtcgccaa accgctatga
      901 tttcccgatg ctcgtgacca catgggagca cgacctgccc gcccaccgtc gccatgccgg
      961 cctgctgtcc ctgcctgaca tctcgctgga ggctctgcag aagaagaagg acatgctaca
     1021 agagcaggtg cttaagactg ccttggtgtc cggtgtcatc caggccctgc cggtccccgg
     1081 actggcagct gcctacgacg acgccttgct tatccgctca ctgcggggat accaccgcag
     1141 cttcggccta gacgacgact cgctggccaa gctggccgag caagtgggca agcaggcagg
     1201 ggacctgcgc tccgtcatcc gctcccctct ggccaacgag gtctcaccag agactgtcct
     1261 gagactctac tcgcagtcct cagatggtgc catgcgggtg gcccgtgcct ttgagagggg
     1321 catccctgta tttggcacgc tggtggccgg gggtatcagc ttcggcacgg tctacaccat
     1381 gctccagggc tgtctcaatg agatggctga ggacgcccaa cgcgtccgca tcaaggccct
     1441 ggaggaagat gagacccagg gtgaggtgag cttggaggcg gctggtgaca atgcagtgga
     1501 aaagcggagc agtggggaag gaaccagcga ggaagccccg ctgtccaccc gcaggaagct
     1561 tggcctcctc ctcaagtaca ttcttgacag ctggaagagg cgcgacttgt cagaagacaa
     1621 ataaaagcgc agccctgccc ctgcccctcc tccccacctc cgcctcaccc accagccaag
     1681 ccctttaaac aaaaccaaca tcaaccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1741 aaaaaaaaaa aaaaaaaaaa
//
