LOCUS       NM_001400996            5110 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus interferon regulatory factor 2 binding protein 2
            (Irf2bp2), mRNA.
ACCESSION   NM_001400996 XM_003751897
VERSION     NM_001400996.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5110)
  AUTHORS   Keller,M.D., Pandey,R., Li,D., Glessner,J., Tian,L.,
            Henrickson,S.E., Chinn,I.K., Monaco-Shawver,L., Heimall,J., Hou,C.,
            Otieno,F.G., Jyonouchi,S., Calabrese,L., van Montfrans,J.,
            Orange,J.S. and Hakonarson,H.
  TITLE     Mutation in IRF2BP2 is responsible for a familial form of common
            variable immunodeficiency disorder
  JOURNAL   J Allergy Clin Immunol 138 (2), 544-550 (2016)
   PUBMED   27016798
REFERENCE   2  (bases 1 to 5110)
  AUTHORS   Childs,K.S. and Goodbourn,S.
  TITLE     Identification of novel co-repressor molecules for Interferon
            Regulatory Factor-2
  JOURNAL   Nucleic Acids Res 31 (12), 3016-3026 (2003)
   PUBMED   12799427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Feb 1, 2022 this sequence version replaced XM_003751897.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.53499.1,
                                           SRR26643429.56517.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN09345238, SAMN12840105
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1547              JAXUCZ010000019.1  71460822-71462368   c
            1548-5110           JAXUCZ010000019.1  71456689-71460251   c
FEATURES             Location/Qualifiers
     source          1..5110
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..5110
                     /gene="Irf2bp2"
                     /note="interferon regulatory factor 2 binding protein 2"
                     /db_xref="GeneID:679357"
                     /db_xref="RGD:1589517"
     exon            1..1547
                     /gene="Irf2bp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             548..2263
                     /gene="Irf2bp2"
                     /codon_start=1
                     /product="interferon regulatory factor 2-binding protein
                     2"
                     /protein_id="NP_001387925.1"
                     /db_xref="GeneID:679357"
                     /db_xref="RGD:1589517"
                     /translation="MAAAVAVAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYE
                     GADRVEFVIETARQLKRAHGCFQEGRSPTGAQPASAKPPPLSAKDLLLQPPPQLGHAG
                     AEAARAQAMERYPLAPDRAPRLASEFSTRAGAGLPQSAASQPSPANGILVPNGFSKLE
                     EPPELNRQSPNPRRAHAVPPTLVPLVNGSAALGLSGRAAATLAAVSGTPGLGAQPAEL
                     GTHKRPASVSSAAAEHEAREQSKEKAQPAHRSPADSLSGTTGASELSAESAGKGRAPG
                     EQDWASRPKTVRDTLLALHHQHGHSGPFESKFKKEPALTAAGRLLGFEANGANGSKAV
                     ARTARKRKPSPEPEGEVGPPKINGEAQPWLSTSTEGLKIPITPTSSFVSPPPPTASPH
                     SNRTTPPEAAQNGQSPMAALILVADNAGGSHASKDTTQVHSTTRRNSSSPPSPSSMNQ
                     RRLGPREVGGQATGSTGGLEPVHPASLPDSSLAASAPLCCTLCHERLEDTHFVQCPSV
                     PSHKFCFPCSRQSIKQQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVK
                     KERDS"
     exon            1548..5110
                     /gene="Irf2bp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtagaagtgg agcggccgca gcggtagcag caacagcggc ggcgcaggag ctgaggcgca
       61 gtgggtgctg tgcagcggct gcgccggggc ctgggaccga gctgcacgct gctgcgcgcg
      121 gcatgccccg ccgctccggc tgagctgccc cggcggctgc tccgcgtccc ccgtccctcg
      181 cgtggctctg cgcccccggc gccaccgcga cctgctgcgc tcgcggcccg tctttgcccc
      241 ggtctggagg cccgagcccg cggccccggc cgagccgccg cccccgcgcg cgccgcgccg
      301 ccccgccgcc cgtggggacc tgcagccgcg ccccgccgcg cgcccgccgc ccctcgtgcc
      361 ccgggggcgc cgcgcgggcg ccgcgccggc tcgggctctg ccgccgccgc ctcctcgcct
      421 gcggccgccg ccgccgctag tcgcgcagac gcgggcttgg gctggccggc gcgcgcgcgc
      481 ggggtccgcg gggggcggcg gcgtcccctc acccggctcc tcctgcggcg cggcgggctg
      541 tgcggacatg gccgcggctg tagcggtggc ggccgcctct cggcgccagt cgtgctatct
      601 gtgtgacctg ccccgcatgc cttgggccat gatctgggac ttcacggagc ccgtgtgccg
      661 cggctgcgtc aactacgagg gcgccgaccg cgtggagttc gtcatcgaga cggcgcgcca
      721 gctgaagcgt gctcacggct gcttccagga gggtcgctcc ccgaccggcg cacagcccgc
      781 atccgctaag ccaccgccac tgtcggccaa ggacctcctg ctgcagccgc cgccgcagct
      841 gggccacgcg ggcgcagagg ccgcgcgcgc tcaggccatg gagcgctacc cgctggcgcc
      901 ggatcgtgcc ccgcgcctgg cctcggagtt cagcacgcgt gcgggtgcag gcctcccaca
      961 gtctgccgcg tcgcagccct cgccggcgaa cggcatcctg gtgcccaacg gcttctccaa
     1021 gctggaggag ccgcccgagc tgaatcgcca gagcccgaac cctcggcgtg cacacgccgt
     1081 tccgcccacc ctggtgcctc tggtgaatgg ctccgccgct ctggggctga gcggccgtgc
     1141 tgcggccaca ctggccgcgg tgagtggaac accgggcctg ggagctcagc ctgcggagtt
     1201 gggcacccac aaacgcccgg cgtctgtgtc gagcgcggcg gctgagcacg aggcgcgcga
     1261 gcagagcaag gagaaagcgc agcccgcgca ccggagcccg gccgacagct tatccggcac
     1321 gactggggcg agcgagctga gcgccgagag tgcaggcaaa ggccgcgcgc ccggggagca
     1381 ggactgggcc agcaggccta agacggtgcg ggacacgctc ctggcgctgc accaccagca
     1441 cggccactcg gggcccttcg agagcaagtt caagaaagag ccagccctga ctgcagcagg
     1501 caggttgttg ggtttcgagg ccaacggggc caacgggtct aaagcagttg caaggacagc
     1561 aaggaaaagg aagccttctc cagaaccgga aggggaagtt gggcccccta agatcaatgg
     1621 agaggcacag ccttggctgt ccacttccac agaagggctc aagatcccca tcacccctac
     1681 atcctctttt gtgtctccac caccccctac tgcctctcct cattccaacc ggaccacacc
     1741 acctgaagcg gcccagaacg gccagtcccc aatggcagcc ctgattttag tagcagacaa
     1801 tgccgggggc agtcacgcct cgaaagatac cacccaggtt cactccacca cccggaggaa
     1861 cagcagcagc ccgccctctc cctcctcaat gaaccaaaga aggcttggcc ccagagaggt
     1921 ggggggccag gccaccggca gcactggagg actggagccg gtgcaccccg ccagcctccc
     1981 agactcctct ctcgcagcca gcgcccccct gtgctgcacc ctctgccacg agcggctgga
     2041 ggatacccac tttgtgcagt gcccatccgt accttcgcac aagttctgtt tcccttgctc
     2101 cagacaaagc attaaacagc agggcgctag cggagaggtc tattgtccaa gcggggagaa
     2161 gtgtcctctg gtgggctcca acgttccctg ggccttcatg caaggagaga ttgctactat
     2221 cctcgccgga gatgtgaaag tgaagaagga gagagactcg tgactttccg tgctcagaaa
     2281 agcccacgct tacctttaac tcaaacttgt tgaactgtat atagatctcc atacatacat
     2341 aaatatatat atataaatat atatatccaa gacaagggaa atgtagactt cataaacatg
     2401 gctgtataat tttgattttt ttgaatacat tgtgtttcta tatttttttt ttttgacgac
     2461 aaaaggtatg tactttaagg cattttcttc ttttgttaac gttgttaggc tgtctgtgct
     2521 tgactcttcg ggtgacagtt gctgttttgt ggaggctgct acttggctgc ttttattttt
     2581 ttgttttgtt atttttctgt ttttggtttt ttgtttttgt tttttttttt tttgttaaga
     2641 gcacttggca aacaaatgct tctagccgta tctgtatgca cttattttaa aaaaaagaaa
     2701 aaaagccaaa tacatttttt tctgacattg taagactgcc ttaccgtctg tcatttctcc
     2761 tcggcgctgg cctctctcag gctggaggcc agtcggtgga ggagaaagga agtgagagga
     2821 agaggacacc tgtcagaagg gcatggcccc cgggaaatgt cacccaccca gcagggccct
     2881 ctcagaggga gggagaaatg gggtttgagt cttgtcaacg gttcagctct tgcaatattg
     2941 gtggtcagag gtgctgctgg aaggtttgca acattgtgtg tttggggttt ggttttttaa
     3001 tcaaaggcaa gccagccggt ggctgttggc tctgcccacg tgaccggttg taagctttca
     3061 gtgcggtgtg ctcctccttg gttgccccca cgggtagttc cagctgtaga agtagttgtg
     3121 agggtgatgt ggaaatcgct cggcaatgcc gcttcctcca gcacagcccg gctctgcagt
     3181 gccgccattg gccttcctga aaaattctgg ggctccttaa ctatcgcagg ccgggcggac
     3241 ccgtgggatc ggactcctgt ctgttgcgtg ttttcttctg tctagttctt gcctgcgtgt
     3301 tgtcctcgtt gtgacgagtg catacttaac tgctgtgtat acgttgacag ttacagccct
     3361 gggtgctgcc gcggggaagg acccgtgtgg gcatgtcagt ggtggggccc agagtgggta
     3421 gaggaagcct gcagttttcc cttaggtgtg tctgaaatag ctaagagaat aactgtcttg
     3481 gaaaagagag agagagagag gagagagaac ccagtaagag ctacatacat gaagggtttt
     3541 tacataagca agccccacct cttaactatt tttagaagcc tcgtgtaaac tagtttcatt
     3601 tggtcactgt tttgccttag tgaagtgatg tttttttaat gtaaacaaca acagatcctt
     3661 agctatcagt agtggtgccc ttaagtaatg ctggtttttg tgggtttttt tttttctttc
     3721 cctccttccg tgcagttttg atttaatgtc agcaggaaca ctaacccccc aaaccctgat
     3781 gtgtgcaggt gtttgcaact tggccttgta ggctcaatca tgacttctac gtctacggtt
     3841 cgtgtgtggt tcacagcctg gcttctattt taatttgaaa atagagatta tcaccaactt
     3901 gacatttttt ttttagttac tttgtttttg ggtttctttt tttttttttt ttttacattt
     3961 ttttgttttt aacttttttt ttttttcaaa gatggttcct tcagtagtca agttacgcac
     4021 acttgacact gcaccaaata cagtgtttct tgtcgggttt ttcttgagtg cacctccatc
     4081 ctccaggttt cttgttacca gtcgtgctgt tacagacagg cttgcaggat agaccggttg
     4141 gtccttactg tgactcaggt ccgactggtc tctctgtggc agagtccgtt ccacctgccc
     4201 gtaaagacat ttgtgaaggg cccaactgtt atggtctata ctataaaatg tttctcagca
     4261 cttttattat aaactggaat ttggcctcgt agatggttac agctagatta gtcatttgac
     4321 ctaatttgcc gtggctgtct gtaatctcaa cacagataag gtctccaaaa agaagaaata
     4381 aaaaaagaat caccccgcag aatgggagaa gtctgtccag ctgcagaaac ggccacctgt
     4441 ggtttctctg ctagtagcaa ggaggccagc ctgacctgtt ctgtaagggc tgtagttgta
     4501 ggttaagggt gggcttcaga aggcttgctg ctaaagcgtt gtcctggagg gggtgagggt
     4561 gggggggggt ctttctctgg cctactctga aaccaccgtt cacacgggaa acctgggtta
     4621 gtcttttgtc ctcagtgaca cagaggatgt agtccacagc taggtagaaa tgtcaggttc
     4681 ccaacactac tccagctgtg actttgatgc ttgggggatg gggtcgtcag gctattttct
     4741 ctgctttaac agttcataga atttaacaga taagagttag tgtctttcat gtggcctcac
     4801 tctggagtta tgagaacata cacacggttt acagcttttc aatatacctt tccctggcca
     4861 tcaagtattt tgaaagtgtg ccacctttta acctttgcgc tttatttttt ttttcttttt
     4921 ttaaagttga aggtgataat ttttctatat atgatgaaac tcaatgtcta ctgaaataag
     4981 tgtaacctta gctatccacg ttatatttta aaaccacgct atggagatat tacccgagtt
     5041 ctgtcatttc gtcagattta cagtaccttc cccccccccc ttttagcatt aaataaaaat
     5101 aaaattggga
//
