LOCUS       XM_039108877            2905 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inositol 1,4,5-triphosphate receptor
            associated 2 (Irag2), transcript variant X1, mRNA.
ACCESSION   XM_039108877
VERSION     XM_039108877.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2905
                     /gene="Irag2"
                     /note="inositol 1,4,5-triphosphate receptor associated 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 42 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:500361"
                     /db_xref="RGD:1562062"
     CDS             877..2643
                     /gene="Irag2"
                     /codon_start=1
                     /product="inositol 1,4,5-triphosphate receptor associated
                     2 isoform X1"
                     /protein_id="XP_038964805.1"
                     /db_xref="GeneID:500361"
                     /db_xref="RGD:1562062"
                     /translation="MIPGPAQRDTDFYRRDWCLTAIPRRGLTPISCASNSAHAACKPP
                     TPEQGAQDGALDMTRGSQCPLPTEGSVLGPQLLDCTRMNENQSTNENGAGHLYSESPS
                     ELRYLSCPLVRECLTQPSSEHTSSSESTVTSSDSGSDTLHMASGDLDCKPLCEKEEEA
                     RVASAVPGTDPAQDNKTTACGDSASVVKAAPQQEAGEELRAVEDRGGKDSATGETEVS
                     TPPKASMKLVNFQQSEPTSANEKEVEAEFLRLSLGLKCDWFTLEKRVKLEERSRDLAE
                     ENLKKEITNCLKLLESLTPLCEEDNQAQEIIKKLEKSIAFLSQCSTRVASRAEMLGAI
                     NQESRVSRAVEVMIQHVENLKRMYAKEHAELEELKQALLQNDRSFNSLQDEDDCQIKK
                     RSSSLNSKPSSLRRVTIASLPRNLGNVGMKVSGLENDRFSRRSSSWRILGTKQGEHRP
                     SLHRFISSYSWADAEEKCDVIKTRDAPEPPGEEAAERTRKPSLSERRGSLSAWDSSTI
                     YSSVASWVTHLRASFRRANRALWLSGLFLVLFAGLMSVLAGQLFQSAVEAAPTQEGDS
                     WMSLEHIFWPLTRLGHDGPPPV"
ORIGIN      
        1 gctgaggggt tgatctcgag cagtggggtt gctttgcttt tctaaatgct ttcacttttt
       61 cctgtctcca gtttcccaga gtgacttgtg attcaagtgt cactgaaagc tcaggtgtct
      121 ctgtctgttc gtctcttttc tctctgtctc ctttactttt taaacagtcg acttcagccg
      181 gaagcagtta gacatcgcta agcaagttgc gcccactagg aagaagctcc acaaagacag
      241 cccagggcac aaagagccag gagtcagctg gtcttggcaa cgttaaactc agagatatca
      301 gctcagatgt tccttaaatt gtgaagcaaa aatggagaag gaacaaaaaa caaaacaaaa
      361 caaaacaaaa aacaaaacaa acaaacgaaa aaggaactat tcagttgtcc ctggaggctg
      421 gctgtgagcc cgcgcagagg aagtgcaagg agtgcagggg tgcaggggta cagaggaggt
      481 ggtgttaaca gcctgctggt caaagagggg agtacagaga gcttaacttg tttctcagga
      541 ctccctgggg tggaaggagt tgggcctgct gtgcccgaac aaacagaatt gcagaagttg
      601 agcctacgct gcttatcact tccctgagaa gaaaagcaca tttccagttt cctgtgccta
      661 agagaaagca agcacccagc gcccttcacg ctgctcaaac ccaggctgac cccgtgcata
      721 tgggacaggg gatcaggatg aggcctatgc accaggcgag tctttgctac atgaactaga
      781 ggaaacaatt ccggaagaac acagtcccca gcactgccca gactcaggag cagaagacca
      841 ggggcgttgg tggcttagct gacgagtctc ctcactatga tccccggtcc cgcacagaga
      901 gacaccgact tctacaggag agactggtgc ctcacagcga ttcccaggag aggactgaca
      961 cccatctcat gtgccagtaa ctcagcccac gctgcgtgta aaccccccac ccccgagcaa
     1021 ggagcacagg atggggcttt ggacatgaca agaggatctc agtgcccgct ccccacagaa
     1081 ggctccgtct tgggaccgca gcttctagac tgtaccagaa tgaacgagaa ccagagtact
     1141 aatgagaatg gtgctggcca cttgtactcg gagagcccgt cagagctcag atatttgtcg
     1201 tgtccccttg tcagggagtg tctcacacaa ccatcgtctg aacacacttc atcctccgag
     1261 agtactgtga cgtcaagtga ttctggatca gacactttgc acatggcttc cggtgacctt
     1321 gactgcaaac ctctctgtga gaaggaggag gaagccagag tggcctccgc cgtgccagga
     1381 accgacccag ctcaggacaa caagaccact gcttgtggag actctgctag tgtggtcaag
     1441 gctgcaccac agcaggaagc aggggaggaa cttagagccg tggaagacag aggagggaag
     1501 gacagtgcca caggagaaac tgaggtttcc actcctccca aagcatccat gaagctcgtt
     1561 aactttcagc agagtgaacc cacttctgct aatgagaagg aagtggaggc agaattcctc
     1621 cggttatctt tgggacttaa atgtgactgg tttacattgg agaagagggt gaagcttgaa
     1681 gagaggtccc gggacctggc agaggaaaac ttgaagaaag aaatcacaaa ctgtttaaag
     1741 cttttagagt cgctgacacc cctgtgtgaa gaggacaacc aggctcagga aatcatcaag
     1801 aagctggaga agagtatagc gttcctcagc cagtgctcga cccgtgtggc cagcagggct
     1861 gagatgctgg gggccatcaa ccaggaaagt cgggtgagta gagcggtgga ggtgatgatc
     1921 cagcacgtag agaacctgaa gaggatgtac gccaaagaac acgccgagct ggaggagctg
     1981 aagcaggcac tgctgcagaa cgacaggtct tttaactctc tgcaggatga agatgactgt
     2041 cagattaaaa agcgttcatc ttctctaaat tccaagccat cttctcttcg aagagtgacc
     2101 attgcctctt tacccaggaa tcttggaaat gtggggatga aggtgtcagg cctggaaaat
     2161 gacagattca gccggcgatc gagcagctgg agaatcctgg ggacaaagca gggtgagcac
     2221 cgcccctcgt tacaccgatt catcagctcc tattcctggg ccgatgcgga ggagaagtgt
     2281 gacgtcatca aaaccagaga cgccccggag cccccaggag aggaggcggc agagaggacc
     2341 aggaagccta gcctttctga gaggagaggc agcctctcgg cctgggacag cagcacaatc
     2401 tacagctcag tggcctcctg ggtcactcac ctgcgggcgt ccttcagaag ggccaacaga
     2461 gcgctgtggc tctctgggct cttcctcgta ctgttcgccg ggttgatgag cgtcctcgcg
     2521 ggtcagctct tccagtccgc cgtggaggcc gcgcccacgc aggaagggga ctcctggatg
     2581 tctctggaac acatcttctg gccattgacc agacttgggc acgatggacc gccaccagtg
     2641 tgactgccac acagctcagt gtccccttgg attttaacat ctccctctga gatttgaaat
     2701 tagtaacttt ttagtaacta cagtgcaggg ctagggtcct tggcagctga gatattttaa
     2761 ttccccaaca aaagcacagg gaaggaactt cgggaaggag ccccccccca gggtatttta
     2821 atgagctttc tgagtgagag acataagact ttattgaaat gtatcaaata aaggccactc
     2881 ggatctttgt gcagtacagc tggaa
//
