LOCUS       XM_006230150            1059 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus IQ motif containing K (Iqck),
            transcript variant X3, mRNA.
ACCESSION   XM_006230150
VERSION     XM_006230150.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006230150.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006230150.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1059
                     /gene="Iqck"
                     /note="IQ motif containing K; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 39 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:100909537"
                     /db_xref="RGD:6502881"
     CDS             37..753
                     /gene="Iqck"
                     /codon_start=1
                     /product="IQ domain-containing protein K isoform X3"
                     /protein_id="XP_006230212.1"
                     /db_xref="GeneID:100909537"
                     /db_xref="RGD:6502881"
                     /translation="MAVPRQASSLSVLREETGGAADSPVTTRMPGLAGSPGSPEVLVL
                     PAQVAEPPGKNLWEQICEEYEAEQPTFPEGYKVKQEAAVTVSSVTPLEELVPHGFNME
                     HYLPVQQFPVTPPVPCPPKKAETVEPKTCSPRDYLEMFIFPVLLPGMANLLHQAKREK
                     CFERKRTKFIACDFLTEWLYKIQRGQGSHSQNSSPFHLWRNGSRTRYLGAGRTEKSAG
                     TRILQTHEDRNWETTSRPSV"
ORIGIN      
        1 ttcgcggcgc cctgggttgc tgtagaaacg gcgtccatgg ccgtgcctag acaagcatcc
       61 agcctcagcg tgctgcgtga ggagacggga ggcgctgcgg actcgccggt cactacacga
      121 atgcccgggc tcgcagggtc gcctgggtcc cccgaagttc tcgtgttacc cgcgcaggtc
      181 gccgagcctc cggggaagaa cctgtgggag cagatctgcg aggagtatga agccgagcag
      241 cctacctttc cggaaggata taaagtgaag caggaagctg cagtcacggt gagctccgtc
      301 acacccttgg aggaactggt tccgcatggc ttcaacatgg agcactatct cccagtgcag
      361 cagttcccag tgacgcctcc tgtgccctgt cctcccaaga aggcagaaac agtcgagccc
      421 aagacctgtt ctcccagaga ttatctggaa atgtttatct ttccagttct gctccccgga
      481 atggccaact tgcttcacca agcaaaaaga gaaaaatgtt ttgagaggaa gagaaccaaa
      541 ttcattgcct gcgatttcct gactgagtgg ctgtacaaaa tccaaagagg gcaggggagc
      601 cattcacaga attcttctcc attccatttg tggaggaatg gctcgcggac caggtacctt
      661 ggagcaggaa gaacagagaa gtcagcagga accagaatcc ttcagacaca tgaggacagg
      721 aactgggaaa caacctcgag gccaagtgtt tagacctcag ctgtgtgggg agctttgctg
      781 ggcgttgtaa tgttggcagt attgttgccc tttccctatt agatgccagt ggcgccccca
      841 aaccctacaa tttaaatatt ctagcacatc tgcagacaga tgaatgcctc acagctgcag
      901 gtgaggcaga ctgcaccagc tgataccctc tgatctaaac ctgtggtttt ctaccttgac
      961 tgcattttaa aatcatctgc aagccagggc tggagagatg gctcagccat tagaggctaa
     1021 gctcacaaaa aaaaaataag taaataaaat cttgaacga
//
