LOCUS       NM_001145072             546 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus IQ motif containing F5 (Iqcf5), mRNA.
ACCESSION   NM_001145072 XM_578755
VERSION     NM_001145072.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000008.1.
            
            On Feb 6, 2009 this sequence version replaced XM_578755.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.2094450.1,
                                           SRR26643293.47212.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-91                JAXUCZ010000008.1  116030180-116030270
            92-546              JAXUCZ010000008.1  116031111-116031565
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..546
                     /gene="Iqcf5"
                     /gene_synonym="RGD1560754"
                     /note="IQ motif containing F5"
                     /db_xref="GeneID:503228"
                     /db_xref="RGD:1560754"
     exon            1..91
                     /gene="Iqcf5"
                     /gene_synonym="RGD1560754"
                     /inference="alignment:Splign:2.1.0"
     CDS             88..534
                     /gene="Iqcf5"
                     /gene_synonym="RGD1560754"
                     /codon_start=1
                     /product="IQ domain-containing protein F5"
                     /protein_id="NP_001138544.1"
                     /db_xref="GeneID:503228"
                     /db_xref="RGD:1560754"
                     /translation="MGPEETTALTEKSAAVRIQAWWRGTLLRRSLLHAALNAWIIQCW
                     WRKTMMTMQGKKRRMALELYVRKTWAIVKLQSCFRMWHIRQRYCRLLNAVRIIQVYWR
                     WHSCHTRGFIRGNYEIKENRLNIQLEISLGSQACKVEQCITLPIKE"
     exon            92..546
                     /gene="Iqcf5"
                     /gene_synonym="RGD1560754"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcatcactt tttcctatct actctctctg ctgggtcaga gctgggagag cagaccggag
       61 ggtgatggga acatctagcc cctaaccatg ggcccagaag agactaccgc cttgaccgaa
      121 aaatctgcag ctgtgcgcat ccaagcatgg tggcgtggca cgttgctgcg gcgctcattg
      181 ctgcacgctg ccctcaacgc gtggatcatt cagtgttggt ggagaaagac aatgatgacg
      241 atgcaaggga agaaacggcg gatggctctg gagttatatg ttcgaaaaac ttgggcaata
      301 gttaaactgc agtcctgttt cagaatgtgg catatacgcc aacgatattg tcgtttgctg
      361 aatgctgttc gcatcatcca ggtttattgg cgttggcata gttgtcacac tcgtggcttt
      421 attcggggca actatgaaat caaagaaaac cgactgaata ttcaacttga aatttccctg
      481 ggctcacagg cttgtaaggt ggaacaatgc ataaccctac caataaaaga gtgatcaggt
      541 ctgcta
//
