LOCUS       NM_001025153            1187 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus IQ motif containing F3 (Iqcf3), mRNA.
ACCESSION   NM_001025153 XM_576465
VERSION     NM_001025153.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079282.1.
            
            On Jul 1, 2005 this sequence version replaced XM_576465.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079282.1, FM062399.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1187
                     /gene="Iqcf3"
                     /note="IQ motif containing F3"
                     /db_xref="GeneID:501050"
                     /db_xref="RGD:1565277"
     exon            1..46
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..706
                     /gene="Iqcf3"
                     /codon_start=1
                     /product="IQ domain-containing protein F3"
                     /protein_id="NP_001020324.1"
                     /db_xref="GeneID:501050"
                     /db_xref="RGD:1565277"
                     /translation="MELDQDQKVETPEAAENGKDEMQLEEQTQDEDTTETETETETET
                     EAEAEGADGTILERTESVKAKLVPQAEKQIQDEKTGIKEADRAIQEQTQDDETEAEGA
                     DGAILKRSESVKVKLIPQAEKQIQDEKTGIKEADRAIQELPANAELAGVKIQAWWRGT
                     LVRRTLLLAILSAWTIQSWWKETKSRLQGRKLHDVMRCRLRNLNLKSISRRKRPNQSS
                     FL"
     exon            47..118
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            119..256
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            257..313
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            314..409
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            410..466
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            467..645
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            646..693
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
     exon            694..1154
                     /gene="Iqcf3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caccaagaga ggaatgaaca tctaaagctg gggccctctc gccatggaac ttgatcaaga
       61 tcagaaagtg gaaacaccag aagcagcaga aaacggaaag gatgaaatgc aactggagga
      121 acaaacccaa gatgaagaca caactgaaac tgaaactgaa actgaaactg aaactgaagc
      181 cgaagctgaa ggggcagatg gaaccatact tgagaggact gagtcggtaa aagcgaaact
      241 cgtcccccag gcagagaagc aaatccaaga tgagaaaact ggaattaaag aggcagatag
      301 agccatacag gagcaaaccc aagatgatga aactgaagct gaaggggcag atggagccat
      361 acttaagagg agtgagtcgg taaaagtgaa actcatcccc caggcagaga agcaaatcca
      421 agatgagaaa actggaatta aagaggcaga tagagccata caggagctgc ctgctaacgc
      481 agagttggcc ggcgtgaaga tccaggcctg gtggcgaggt acgctggtac gccgaaccct
      541 gctgcttgca atcctcagcg cttggaccat tcagtcctgg tggaaggaga caaagagcag
      601 gttgcagggg aggaagttgc atgacgtgat gcgctgcaga ctgagaaacc taaacctgaa
      661 gtccatcagc agaagaaaac gacccaacca aagctccttc ctttaaaaca acccaaggac
      721 tcaaagataa aaaggacccg agcagccaag aagatccagg ccttgtggcg tggattcctg
      781 gtaaggcaaa ctctgctggc tgcagccctc cgcgtctggg tgattcagtg ttggtggagg
      841 agcgtcctcc acaggcaggt acttaaacga cggctgtccc tgctgagggt gtacgtcatc
      901 gaggaagagg cagccgtcag gctccaggcc tgggttcgca tgtggaattg ccgtcgatac
      961 ttcaatcaag tatgcaaaac actttgtgtc atcccatctg tcgaaaacag ccttaccttc
     1021 aagaatgatg acattttaca gggtcaatat gaagttgttt ccaggcaacc agagttccac
     1081 attgaaatct tatccatcta aaggcccaca gcacaaagag ttggctccaa tgcctaaata
     1141 aacacctgaa ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
