LOCUS       NM_001400931            1892 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus IQ motif containing C (Iqcc), mRNA.
ACCESSION   NM_001400931
VERSION     NM_001400931.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.440842.1,
                                           SRR26360186.1466880.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676788 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JAXUCZ010000005.1  147246372-147246453 c
            83-226              JAXUCZ010000005.1  147245804-147245947 c
            227-479             JAXUCZ010000005.1  147243900-147244152 c
            480-586             JAXUCZ010000005.1  147243619-147243725 c
            587-1892            JAXUCZ010000005.1  147242221-147243526 c
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1892
                     /gene="Iqcc"
                     /note="IQ motif containing C"
                     /db_xref="GeneID:682431"
                     /db_xref="RGD:1583461"
     exon            1..82
                     /gene="Iqcc"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..1150
                     /gene="Iqcc"
                     /codon_start=1
                     /product="IQ domain-containing protein C"
                     /protein_id="NP_001387860.1"
                     /db_xref="GeneID:682431"
                     /db_xref="RGD:1583461"
                     /translation="MDPDLFLRKVSTLQAGFRGFLVRRQFQSLRAEYEAIVEEIEGDV
                     RTLRWTGGWIPKPIFLPEAKSHRSWKIEKIPNPEQKLSSHSPHKDSEKELLWEEMVLR
                     KTDKNPAEPGSLCRGDSAWPQAEPGRKASQGNSRDPSISKVQSAVTDLGLSQTQQELQ
                     EQRNHLAMELLWLQQAINSRKEYLILKQTLRSPEASQIRDKPTKMCLKHRGQAYEETW
                     LQSSCVLDNQSYRDGVIGEPHHAEDSCHRGTLQPQKPPDSMTSTSKATAGAKGGELYR
                     NSGSQLPTALESQAGGVRVTKGPDRGGQPFNETSRQQLKLLEDQTLRDLKLRSSYSGK
                     VETQLPTLSENLNIEDRYSRKPSYKEADWPERRAL"
     exon            83..226
                     /gene="Iqcc"
                     /inference="alignment:Splign:2.1.0"
     exon            227..479
                     /gene="Iqcc"
                     /inference="alignment:Splign:2.1.0"
     exon            480..586
                     /gene="Iqcc"
                     /inference="alignment:Splign:2.1.0"
     exon            587..1892
                     /gene="Iqcc"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtgcgggt gacgcacagc gctgggcggt tagcggcaag atggatcccg atctcttcct
       61 tcgaaaggtg tctacgttgc aggccggctt ccggggcttc ttggtccgac gtcaattcca
      121 gagccttcga gctgagtatg aggcaattgt agaggagatt gagggtgacg tccgcacact
      181 tcggtggact gggggctgga ttcccaagcc catatttctc ccagaggcaa aatctcatcg
      241 atcctggaaa atagagaaaa taccaaaccc agagcagaaa ctatcgagcc attccccaca
      301 taaagactct gaaaaagaac tcctctggga ggagatggtg ctgaggaaga cagataaaaa
      361 cccagcagag ccaggaagtc tttgcagagg tgacagcgcc tggccacagg ctgagccggg
      421 caggaaagcc agccagggga acagtagaga cccctccatc tccaaggtgc aaagtgcagt
      481 cacagatcta ggattgtccc agacacaaca ggaactccag gagcagcgca accacttggc
      541 catggagctg ctgtggctac agcaggccat taacagtcgg aaggagtacc tgattctcaa
      601 gcaaacactg cgatccccag aagcaagcca gatcagagac aagcctacta agatgtgcct
      661 gaagcacagg ggacaggcct atgaggagac ctggttgcaa tcaagctgtg ttctggacaa
      721 ccaatcctat agagacgggg tcataggaga gccacatcat gcagaggatt cctgccacag
      781 gggcacattg cagccgcaga aacccccaga cagtatgacc agtacaagca aagccactgc
      841 tggggctaaa ggcggggaac tctatcggaa ctctggttca cagctgccta cagcattaga
      901 gagccaggct ggaggggtca gggtcaccaa agggccagac cgtggaggac agccctttaa
      961 tgaaacctcc cgacagcagc tgaaactcct agaagatcag actcttaggg acctcaaatt
     1021 gaggagttct tattctggaa aggtcgaaac acagctgccc actctcagtg aaaatctaaa
     1081 tattgaggac agatattcca gaaagccaag ctacaaagag gctgactggc cagagcgccg
     1141 ggccctatga tctgagtatc tcagaaggcc gcaggatttg ggatgagacc ttggcagggc
     1201 aggaacatgg tagcctggat ctcacagaga ccaaaccacc caagagccag cccctagtgc
     1261 tagggcttcc agccatgggt ctgcagtgag cttagtgcag aaggatggga gagcacggac
     1321 tctgcagtgg aaatgaaaag cactggagaa cttgtcttcc acaagacagg cctgggggaa
     1381 gggcagaaaa cggaaagcag gaccagcagg caacctgggg acccaggaaa ggaagggggt
     1441 gctatgaaaa atgatatgga agcaggccct tgtcctgcct ccctggcccc acatctgcct
     1501 ttggtagctg tctggctaag agaagctgca gggctgagct ggtacagtag gagagagaag
     1561 gacgacacgc ccttttctct tctgcctgtg acttaaacca aattttgtgg attgatgtct
     1621 acttgcaggc acaaaatatg gcagtgaaaa aggcaagcgg gctgagaatt tgagaggcgg
     1681 gacagagtaa ggaggaggag agaaggatga cccagatccg gtggctttaa atagccacag
     1741 gtggctatga accttatatg ggatgggtaa ttacaggaca atttgtctta tctaggtggg
     1801 cagtttgtca atttcagtta gccctgagtt tattgtgtgg acgttttgtg gggtgagaat
     1861 ttactgatat aaatttgatt gataaattac aa
//
