LOCUS       XM_039080522            1919 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus IQ motif and ankyrin repeat containing
            1 (Iqank1), transcript variant X1, mRNA.
ACCESSION   XM_039080522
VERSION     XM_039080522.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080522.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1919
                     /gene="Iqank1"
                     /note="IQ motif and ankyrin repeat containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:500895"
                     /db_xref="RGD:1563870"
     CDS             101..1888
                     /gene="Iqank1"
                     /codon_start=1
                     /product="IQ motif and ankyrin repeat domain-containing
                     protein 1 isoform X1"
                     /protein_id="XP_038936450.1"
                     /db_xref="GeneID:500895"
                     /db_xref="RGD:1563870"
                     /translation="MSTKKGGPKGTAKGQASLSGSKLRAAAGNPRDSQQLHRKASGPG
                     KESFSENTKAPAAPTREDKAAIVIQCALRRYLARKEMARRWQERQEYLDEMEKLQRAA
                     YLALVRQEQEAARKQREKEEAEERARREELQRRRRLLEAAFEGDLGEIRQVLKEVEQL
                     MTREGVGYDEDGKARRLQRRVATVECEDSHGNTPLSEAAAGGQVPAIQLLAELGANPN
                     SKVGVVRTADLVAWSPHVLREPLLQGAFGRTPLYRAAFGGHLEAVEVLLKNGADPRVY
                     ADDGSTPEQVASLAAVVSVLQSWDLSLTEAMLQNMEAEQQRRAQEAQRHKEKEAKRIT
                     VKVQQLAKEQQKCQKELQQAYCELNRRIMEHDKCERKGLGKTELTLEAIRDAETQVDK
                     LRLEAQKAEETLAMARLELREQTLEDEEVTEPGLKCRIAELHDVLMKDVGDRIRADGR
                     WPLVIDPSGQAATFLRYQDTNYMDTLNPEHLKPERIRLALLGALRYGKPLVFDLREVN
                     LFAVVQQQLEEVQPGLAEALLNRGLLAKEGYLSLLRPTDGPEYDPSQFQEARLENFRL
                     FFVTKVQWPPADQLQILLPVRVQLQSGGF"
ORIGIN      
        1 gattcggaag ttccggctta gtcgctagga aactggccag ctcgacgcga ggggcggagc
       61 ttttagcctc agtgtagtga gaggcaggtg aggcaggaga atgagcacta agaagggggg
      121 gcccaaaggt acagcaaagg ggcaggcgtc cctctctggg tccaagcttc gagctgctgc
      181 tgggaacccg agagatagcc aacagctgca taggaaggcc agcggtccag gcaaagagtc
      241 cttttcggag aacaccaagg cccctgcagc gccaaccaga gaggacaaag ctgccattgt
      301 catccagtgt gccttacggc gatatctggc gcgaaaggag atggcccgtc gttggcagga
      361 gcgccaggag tacctggatg agatggagaa gctgcagaga gcggcctacc tggccttggt
      421 gcgccaggag caggaggcag cgcggaagca gcgcgagaag gaggaagcgg aggagcgcgc
      481 acggcgggag gagctgcagc gccgccgtcg cctgctagag gccgccttcg aaggggacct
      541 gggcgagatc cgccaggtgc tcaaggaggt ggagcagctg atgaccaggg aaggcgtggg
      601 ctacgacgag gacggcaagg ctcggcggct gcagaggcgc gtggccactg tggagtgcga
      661 ggacagccac gggaacacgc ctctatccga ggcggcggcg ggcgggcagg tcccggccat
      721 ccagttgctg gcggagctgg gtgctaaccc caacagcaag gtgggagtgg tgcgcacggc
      781 ggacctggtg gcctggtccc cgcacgtgct cagggagccc cttctgcagg gcgccttcgg
      841 ccgcacgcca ctctaccggg cagcttttgg gggccacctg gaagccgtgg aggtgcttct
      901 gaagaacgga gcagaccccc gggtgtacgc ggatgacggg agcactccgg agcaggtggc
      961 ctcactggcc gcggtggtca gcgtgctgca gtcatgggac ctgagcctca cagaggctat
     1021 gctccaaaac atggaggcag agcagcaacg ccgtgctcag gaggcccaaa ggcacaagga
     1081 gaaggaggcc aagcgcatca ctgtcaaggt gcagcagctg gctaaggagc agcagaagtg
     1141 tcaaaaggag ctccagcagg cctactgtga gctcaatcgg aggatcatgg agcacgacaa
     1201 gtgtgagcgg aagggcctgg gcaagaccga actcacacta gaggccatca gggatgcaga
     1261 gacccaagtg gacaagttgc ggctagaggc gcagaaggct gaggagacac tggccatggc
     1321 caggctggag cttcgggaac agaccctgga ggacgaggag gtgacagaac ctgggttgaa
     1381 gtgccggatc gcagaacttc atgacgtgct gatgaaggat gtaggcgacc gcatccgtgc
     1441 tgatggacgg tggcctcttg tcattgaccc ttctggacag gcagccactt tcttgagata
     1501 ccaggacacc aactatatgg acaccttaaa tccggagcac ttgaaaccag agaggattcg
     1561 gctggccctc ctgggggcac tcaggtacgg gaagccactg gtgtttgacc tgcgtgaggt
     1621 gaacctgttc gcagtggtac agcaacagct ggaggaagtg cagcctggcc tggcagaggc
     1681 tttgttgaat cgtgggctgc tggcaaagga aggctatctg tcactgcttc ggccaacaga
     1741 tggacccgag tacgacccct cccagttcca agaggctcgc ctagagaact tccgcctctt
     1801 ctttgtcacc aaagttcagt ggccaccagc tgaccagttg caaatcctgc tcccagtgcg
     1861 tgtacagctg caaagtggag gattctagcc ataccccaat aaagcatgtg gccaaggca
//
