LOCUS       NM_001107545            5208 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus importin 7 (Ipo7), mRNA.
ACCESSION   NM_001107545 XM_001077641 XM_219265
VERSION     NM_001107545.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Braun,D.A., Sadowski,C.E., Kohl,S., Lovric,S., Astrinidis,S.A.,
            Pabst,W.L., Gee,H.Y., Ashraf,S., Lawson,J.A., Shril,S., Airik,M.,
            Tan,W., Schapiro,D., Rao,J., Choi,W.I., Hermle,T., Kemper,M.J.,
            Pohl,M., Ozaltin,F., Konrad,M., Bogdanovic,R., Buscher,R.,
            Helmchen,U., Serdaroglu,E., Lifton,R.P., Antonin,W. and
            Hildebrandt,F.
  TITLE     Mutations in nuclear pore genes NUP93, NUP205 and XPO5 cause
            steroid-resistant nephrotic syndrome
  JOURNAL   Nat Genet 48 (4), 457-465 (2016)
   PUBMED   26878725
REFERENCE   2  (bases 1 to 5208)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 5208)
  AUTHORS   Yang,I.V., Wade,C.M., Kang,H.M., Alper,S., Rutledge,H.,
            Lackford,B., Eskin,E., Daly,M.J. and Schwartz,D.A.
  TITLE     Identification of novel genes that mediate innate immunity using
            inbred mice
  JOURNAL   Genetics 183 (4), 1535-1544 (2009)
   PUBMED   19805818
REFERENCE   4  (bases 1 to 5208)
  AUTHORS   Muhlhausser,P., Muller,E.C., Otto,A. and Kutay,U.
  TITLE     Multiple pathways contribute to nuclear import of core histones
  JOURNAL   EMBO Rep 2 (8), 690-696 (2001)
   PUBMED   11493596
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001107545.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.2293.1,
                                           SRR26643297.3014.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-243               JAXUCZ010000001.1  173497472-173497714
            244-325             JAXUCZ010000001.1  173505338-173505419
            326-479             JAXUCZ010000001.1  173508186-173508339
            480-638             JAXUCZ010000001.1  173509826-173509984
            639-795             JAXUCZ010000001.1  173514767-173514923
            796-885             JAXUCZ010000001.1  173516804-173516893
            886-980             JAXUCZ010000001.1  173518134-173518228
            981-1065            JAXUCZ010000001.1  173518340-173518424
            1066-1200           JAXUCZ010000001.1  173520154-173520288
            1201-1300           JAXUCZ010000001.1  173520968-173521067
            1301-1377           JAXUCZ010000001.1  173522887-173522963
            1378-1494           JAXUCZ010000001.1  173523243-173523359
            1495-1584           JAXUCZ010000001.1  173525587-173525676
            1585-1750           JAXUCZ010000001.1  173526062-173526227
            1751-1911           JAXUCZ010000001.1  173526384-173526544
            1912-2040           JAXUCZ010000001.1  173527635-173527763
            2041-2107           JAXUCZ010000001.1  173528947-173529013
            2108-2233           JAXUCZ010000001.1  173529091-173529216
            2234-2331           JAXUCZ010000001.1  173529750-173529847
            2332-2427           JAXUCZ010000001.1  173530727-173530822
            2428-2648           JAXUCZ010000001.1  173531098-173531318
            2649-2854           JAXUCZ010000001.1  173531413-173531618
            2855-3061           JAXUCZ010000001.1  173532787-173532993
            3062-3178           JAXUCZ010000001.1  173534906-173535022
            3179-5208           JAXUCZ010000001.1  173535678-173537707
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..5208
                     /gene="Ipo7"
                     /note="importin 7"
                     /db_xref="GeneID:308939"
                     /db_xref="RGD:1310849"
     exon            1..243
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     CDS             160..3276
                     /gene="Ipo7"
                     /codon_start=1
                     /product="importin-7"
                     /protein_id="NP_001101015.1"
                     /db_xref="GeneID:308939"
                     /db_xref="RGD:1310849"
                     /translation="MDPNTIIEALRGTMDPALREAAERQLNEAHKSLNFVSTLLQITM
                     SEQLDLPVRQAGVIYLKNMITQYWPDREATPGDISPYTIPEEDRHCIRENIVEAIIHS
                     PELIRVQLTTCIHHIIKHDYPSRWTAIVDKIGFYLQSDNSACWLGILLCLYQLVKNYE
                     YKKPEERSPLVAAMQHFLPVLKDRFIQLLSDQSDQSVLIQKQIFKIFYALVQYTLPLE
                     LINQQNLTEWVEILKTVVNRDVPNETLQVEEDDRPELPWWKCKKWALHILARLFERYG
                     SPGNVSKEYNEFAEVFLKAFAVGVQQVLLKVLYQYKEKQYMAPRVLQQTLNYINQGVS
                     HALTWKNLKPHIQGIIQDVIFPLMCYTDADEELWQEDPYEYIRMKFDVFEDFISPTTA
                     AQTLLFTACSKRKEVLQKTMGFCYQILTEPNADPRKKDGALHMIGSLAEILLKKKIYK
                     DQMEYMLQNHVFPLFSSELGYMRARACWVLHYFCEVKFKSDQNLQTALELTRRCLIDD
                     REMPVKVEAAIALQVLISNQEKAKEYITPFIRPVMQALLHIIRETENDDLTNVIQKMI
                     CEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEGSDDKAVTAMGILNTIDTLLSVVED
                     HKEITQQLEGICLQVIGTVLQQHVLEFYEEIFSLAHSLTCQQVSPQMWQLLPLVFEVF
                     QQDGFDYFTDMMPLLHNYVTVDTDTLLSDTKYLEMIYSMCKKVLTGVAGEDAECHAAK
                     LLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRTMCLQVAIAALYYNPHLLL
                     NTLENLRFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLGLCALIDMEQIPQVLNQ
                     VSGQILPAFILLFNGLKRAYACHAEHENDSDDDDDAEDDDETEELGSDEDDIDEDGQE
                     YLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNPVDEYQIFKAIFQTIQNR
                     NPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPVVPSSFNF
                     GGPAPGMN"
     exon            244..325
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            326..479
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            480..638
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            639..795
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            796..885
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            886..980
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1065
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1200
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1201..1300
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1377
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1378..1494
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..1584
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1750
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1751..1911
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            1912..2040
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2041..2107
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2108..2233
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2234..2331
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2332..2427
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2428..2648
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2649..2854
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            2855..3061
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            3062..3178
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
     exon            3179..5208
                     /gene="Ipo7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccacgccga ggcgagaagg ttctatccgg ggccttggcg cttctctttc ctttcgcgcc
       61 ggttgccgct gcggagcgcg gccggtccat gtgcgcagtg agtggcgcta tttctgcctc
      121 agtagcaccg gtgtcccggg tttgaccgac cgcgcggcga tggatcccaa caccatcatc
      181 gaggcccttc ggggcaccat ggacccagcc ctgcgcgagg ccgctgagcg ccagctcaat
      241 gaagcacaca agtctctgaa ttttgtttca acactgctcc agattactat gtcagaacaa
      301 ctggatttac ctgtgagaca ggcaggtgtt atttatttga aaaatatgat aacacaatat
      361 tggcctgatc gggaagccac accaggggac atctccccat atactattcc agaagaagac
      421 cgacactgca ttcgagaaaa tattgtagaa gccattatcc actcacctga gcttattagg
      481 gtacagctta ctacatgtat ccatcatatc atcaaacatg actatccaag ccgctggact
      541 gctatcgtgg acaagattgg tttttatctc cagtctgata acagtgcttg ttggctggga
      601 attcttcttt gcctttatca gcttgtgaaa aattatgagt acaagaaacc agaagagcga
      661 agcccattgg tggcagccat gcagcacttc ctgccagttc tgaaggatcg ctttatccag
      721 ctgctttctg atcaatctga ccagtctgtt ctcatccaaa agcagatttt caagattttc
      781 tatgctcttg ttcagtatac actacccctg gagctgataa atcaacagaa cctgactgaa
      841 tgggtagaaa ttttgaagac tgttgtgaat agggatgtac ctaacgaaac acttcaagtt
      901 gaagaagatg atagaccaga gttaccctgg tggaaatgta aaaagtgggc cttacatatt
      961 ttagcaagac tttttgaaag atatggaagc cctgggaatg tttctaaaga gtataatgag
     1021 tttgctgaag tctttctgaa ggcatttgct gttggtgtcc agcaagtttt attgaaagtg
     1081 ttgtatcagt acaaggagaa acagtatatg gctcctcgag ttttacagca gacattaaat
     1141 tatattaatc aaggagtttc ccacgctctt acatggaaga acctgaagcc tcatatacaa
     1201 ggcattatcc aagatgttat ttttccattg atgtgctata cagatgctga tgaggaactc
     1261 tggcaagaag atccttatga atatatacgc atgaagtttg atgtgttcga ggatttcatt
     1321 tctcctacta ctgcagctca aacacttttg tttacagcct gtagtaaaag gaaagaggta
     1381 ctgcaaaaga ctatgggatt ttgttaccag attcttactg agccgaatgc tgatccacgt
     1441 aaaaaagatg gagctttgca tatgattggc tctttagctg aaatacttct gaagaagaag
     1501 atctacaaag atcaaatgga atacatgttg caaaatcatg tatttcctct cttcagcagt
     1561 gaactaggct acatgagagc aagagcttgc tgggttcttc actatttttg tgaagtgaaa
     1621 ttcaaaagtg atcaaaacct ccaaacagct ttagagctga caagaagatg tctgattgat
     1681 gatcgagaaa tgcctgtaaa agtggaagct gccattgcac tacaagtgtt gataagcaat
     1741 caagaaaaag ctaaagaata catcactcca tttatcagac ctgtaatgca ggctcttctt
     1801 catattataa gagaaacaga aaacgatgat cttacaaatg taattcagaa aatgatctgt
     1861 gaatatagtg aagaagttac tcctattgct gtagaaatga cacaacatct ggcaatgaca
     1921 tttaaccaag taatccagac tgggccagat gaggaaggaa gcgatgacaa agcagtcact
     1981 gctatgggaa ttttaaatac aattgacaca ctcctgagtg tggttgaaga tcacaaagag
     2041 ataacccagc agcttgaagg gatctgctta caagtcatcg ggaccgtttt acagcagcat
     2101 gtcttagaat tctatgagga gatcttttct ttggcacata gtctgacatg tcaacaagta
     2161 tctccacaga tgtggcagtt actgcccctt gtatttgagg tattccagca agatggcttt
     2221 gattacttta cagacatgat gcctcttcta cataactatg taacagttga tacagatacc
     2281 cttctatctg ataccaagta tcttgaaatg atatacagca tgtgtaaaaa ggttcttact
     2341 ggagttgcag gagaagatgc agaatgccat gcggcaaaat tattagaggt catcattcta
     2401 cagtgcaaag gccggggcat tgatcagtgt atcccattat tcgtggaggc agctttagag
     2461 agactgacga gggaggttaa aacaagtgag ctccgaacaa tgtgcttgca ggttgcaatt
     2521 gcagcattgt attataatcc acacctactg cttaatacct tagaaaatct tcgcttccca
     2581 aataatgttg aacctgttac aaatcatttt atcacacaat ggcttaatga cgttgactgt
     2641 tttctggggc ttcatgacag gaagatgtgt gttcttggcc tgtgtgctct tatagatatg
     2701 gaacaaatac cacaggtttt gaatcaggtt tcaggacaga ttttgccagc atttattctt
     2761 ttatttaatg gattaaaaag agcgtatgcc tgccatgcag aacatgagaa tgatagtgat
     2821 gatgatgacg atgccgaaga tgatgatgag actgaggaac tagggagtga tgaagatgat
     2881 attgatgaag atgggcagga atatttggag atcctagcta aacaagctgg tgaagatgga
     2941 gatgatgaag attgggaaga agatgatgcc gaggagactg ctctagaagg ctattccaca
     3001 atcatcgatg atgaggataa ccctgttgat gagtatcaaa tatttaaagc tatatttcaa
     3061 actattcaaa atcgtaatcc tgtatggtat caggctttga ctcacggtct taatgaagag
     3121 caaagaaaac agttacagga catagcaact ctggctgatc aaagaagagc agcacatgaa
     3181 tccaaaatga ttgaaaagca tggaggatat aaattcagtg ctccggttgt gccaagttct
     3241 ttcaattttg gaggcccggc accagggatg aattgagctt ccactttctt tcctgctgtg
     3301 tgagtgtagt gaagagcttg tgttcctcct agtagtggtt ccagaaccgg ttcatgttat
     3361 gtactaactg atcaatagaa ggacagaaac cccaggaggt gggagctgat catgtaacct
     3421 ggcactggac gagaaactag agggatttgg ggagggggta acttgggggg ctattttctt
     3481 tattttttga agaaagtaag atcctgactc tgaagcttca agagacactg tggaaatctg
     3541 aaatgagggg atgtcatgaa ggcagctttt ctttttctga ggaaaaaaat aggcatgggc
     3601 tacaggacta tttaaaatgt ctcatttaca gtataaagtt caaaggtaga tgtaattttt
     3661 acacctctaa gtatttgtcc tacttctgtc tcttccttac cattgggtat ccttcatatg
     3721 taaataagat aaggtaatca gatagcctta ttcggtcttt atcattttca tttaccagat
     3781 tgttactatg tagattggac atttattgta gcactacata actgatttta aaatctgtaa
     3841 atgaattagc actttcatat tgaaacaagc ctgctagcct atgtataaaa gcaaaactgt
     3901 ttgctgttta taaaaaggga tgtaatgggg tgggggggag gggtaatttc aggtttaatt
     3961 attaatttaa aaatgaacta gcaattttgt atctggtgac tttgtggtgc actcacctct
     4021 ggtagtgact tgaattcggt ttgtaaaaag ggttagtgat gtttcattgc tgctaaaaat
     4081 ggcaactccc tctgtgtcct tttttgttcc ttaaagctct cagtgtacaa gtggacattt
     4141 ggatacaaga ccttatgtaa caaacagagg tgatacctga agcatgtaaa ttggatataa
     4201 aattctactc ttaaagagtt gatctagagt atggctaaac atctatatat gcagtctatt
     4261 aaaaactcaa ttcggcaatt atgtcttgat ctgattgcaa tttattccta attaatacct
     4321 atccccatta acctgttttt atcttgtacc agatagagtg caaaatgtat ttaagattaa
     4381 tacctgccca ttccccattt cccctcccgt cttgattatg gtatcttatc gtaactctga
     4441 agactgaagg cacatggttc cctctaaaaa ccactattga gaccactgca gaaataagcc
     4501 agcaacaaca gggtagcggg gtgggcttct cccctctctt cctaaatgca tgttcaaaaa
     4561 ctttattgat cttaaacatc tgtcagatga gtcatacatt ggattatttt ttatatacat
     4621 gtatacacaa tatttcaaat tgaaagcaac atctcagtgg attcaaaact actacatact
     4681 gttgtctaaa acaaaattta taattgtaca aatgaaatgc acatattgat atttaaaatg
     4741 cataattaag aaaaaccctt tggtgttgtg tttttcttgt gtaccaatac ttttggcact
     4801 gcttggtttt ctgttttgac tctgaaggaa tcaaagtact tctaaattta atactaaaat
     4861 gttggcaaaa ggaaagcaat gtctcaatgt gtgggtgaaa attgttaaat cgagtgtgct
     4921 tcttctactc ctgtctcaca gttaggacac caagtgtata ccctaggttg cttaaggttc
     4981 tataaaaatc aaaacaataa aaatgcggta gttattcata ttctacattg tgtgcagagg
     5041 ggagaatatt attaacatcg tcttcctttt catttctgta cctagtctat aagttctcag
     5101 acttcattta tatttaaatt aattcaattt tcacattgtt actcagaaca ccatatctaa
     5161 aaaaggattt atacagtgaa aattctcatt acataggtta tatatttt
//
