LOCUS       XM_039093991            4713 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus importin 5 (Ipo5), transcript variant
            X4, mRNA.
ACCESSION   XM_039093991
VERSION     XM_039093991.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093991.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4713
                     /gene="Ipo5"
                     /note="importin 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 144 ESTs, 12 long SRA
                     reads, 24 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:306182"
                     /db_xref="RGD:1308715"
     CDS             206..3499
                     /gene="Ipo5"
                     /codon_start=1
                     /product="importin-5 isoform X1"
                     /protein_id="XP_038949919.1"
                     /db_xref="GeneID:306182"
                     /db_xref="RGD:1308715"
                     /translation="MAAAAAEQQQFYLLLGNLLSPDNVVRKQAEETYENIPGRSKITF
                     LLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQ
                     SSMRKKICDIAAELARNLIDEDGNNQWPEGLKFLFDSVSSQNMGLREAALHIFWNFPG
                     IFGNQQQHYLDVIKRMLVQCMQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLL
                     PGFLQAVNDSCYQNDDSVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTNLNNMQR
                     QLALEVIVTLSETAAAMLRKHTNIIAQTIPQMLAMMVDLEEDEDWANADELEDDDFDS
                     NAVAGESALDRMACGLGGKLVLPMIKEHIMQMLQNADWKYRHAGLMALSAIGEGCHQQ
                     MEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTM
                     EDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKLV
                     LEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENAVQKELRLLRGKTIECISLIGL
                     AVGKEKFMQDASDVMQLLLKTQTDFNDMEDDDPQISYMISAWARMCKILGKEFQQYLP
                     VVMGPLMKTASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIKTAGLEEKSTAC
                     QMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHDGVRVAAAESMPLLLECARVRGPE
                     YLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEELGGILK
                     AKLEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEK
                     VLPWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDIIEHCSPASFKYAEYFLRPMLQYV
                     CDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENC
                     ISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFSYLCDLIESNHPIVLGP
                     NNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQA
                     AIQELLNSA"
ORIGIN      
        1 tgacctcttt gagctgtgag gtcagaactg tggggttagt gccatcctat gaccgaagca
       61 agcatagggc tgagaacagc cttgactact cagggaaagg aaattcctaa gcaaggaaca
      121 ccgctcagaa agtgttgtgc catgcctcca aatccctgag aatcaagtcg aaaaactggg
      181 agcaacagaa aacactgtac gcgcaatggc ggcggccgcg gcggagcagc aacagttcta
      241 cctgctcctg ggaaacctgc tcagccccga caatgtggtc cggaaacagg cggaggaaac
      301 ctatgagaat atcccaggcc ggtccaagat cacattcctc ctacaagcca tcagaaacac
      361 cacagccgct gaggaggcta gacaaatggc cgctgttctc ctaagacgtc ttttgtcctc
      421 tgcatttgat gaagtctatc cagctcttcc atcagatgtc cagaccgcca tcaagagtga
      481 attgctgatg atcattcaga tggaaacaca gtccagcatg aggaagaaaa tctgtgatat
      541 tgctgcagaa ttggccagga atttaataga tgaggatggc aacaaccagt ggcctgaagg
      601 tttgaagttc ctctttgatt cagtcagctc acaaaacatg ggactccggg aagctgccct
      661 tcacatattt tggaactttc ctggcatttt tgggaaccag caacagcact atttggacgt
      721 catcaaacgg atgttagttc agtgtatgca agatcaggaa catccttcga tccggacact
      781 gtctgcccga gctacagctg cctttatcct tgctaacgag cacaacgtcg ctctgttcaa
      841 acacttcgca gacctgctgc ctgggttcct acaggctgtc aacgactcat gctaccagaa
      901 tgatgattcg gtcctaaaat cccttgttga gattgcagat acggtgccaa agtatttgcg
      961 ccctcactta gaagcaactc tacagttaag tctaaagttg tgtggagaca ctaacctcaa
     1021 taacatgcag cgccagcttg ccctggaagt gatcgtgacg ctgtcggaga ccgcagctgc
     1081 tatgctaaga aagcacacca atattatcgc acagaccatt cctcagatgt tggcaatgat
     1141 ggttgaccta gaagaagacg aggactgggc aaatgctgat gagctagaag atgatgattt
     1201 cgatagcaat gcagttgctg gtgagagcgc attggaccga atggcctgtg gactgggtgg
     1261 gaagctcgtc ctgccaatga ttaaggaaca cattatgcaa atgcttcaaa acgctgattg
     1321 gaaataccgg catgcgggat taatggcctt gtccgccatt ggtgaaggat gccaccagca
     1381 gatggaagga attctcaatg agattgtaaa tttcgtcttg cttttcctcc aggatcctca
     1441 cccaagagtc cggtacgcag cctgcaatgc cgtgggtcag atggctacag atttcgcacc
     1501 tggttttcaa aagaaatttc atgagaaggt gattgcagct ttgcttcaga ccatggaaga
     1561 ccaaggcaac caacgggtgc aggcccacgc agcagctgcc ctcattaact tcacggaaga
     1621 ctgtcccaag tcactgctta ttccctactt ggataacttg gtgaagcatc tgcattccat
     1681 tatggtgctc aagcttcagg agctgattca gaaaggcacc aagttagttt tggaacaagt
     1741 tgtgacatcc attgcatcag ttgcagatac tgcagaagaa aagtttgtcc cctactatga
     1801 cttattcatg ccttcactga agcacattgt tgagaatgca gtccagaagg agctgagact
     1861 gctgagaggg aagaccatcg agtgcatcag cctcattggt ctggccgtcg ggaaggagaa
     1921 gttcatgcag gacgcttcgg atgtcatgca gctgttgttg aagacgcaga ccgacttcaa
     1981 tgacatggaa gatgacgacc ctcagatttc ttacatgatc tcagcgtggg ccaggatgtg
     2041 caaaatcctt gggaaagaat tccagcagta ccttcctgtg gttatggggc cactgatgaa
     2101 gaccgcttca attaagcctg aagtggccct tctagacacc caggacatgg agaatatgag
     2161 tgacgacgat ggttgggaat ttgtaaacct tggagatcag cagagttttg gtattaaaac
     2221 tgcaggactg gaggagaagt caacggcttg ccagatgctg gtttgttatg ctaaggaatt
     2281 aaaggaaggt ttcgtggaat acactgaaca ggttgtcaaa ctgatggtcc cactgctgaa
     2341 attttatttc catgatgggg ttcgagtggc agcagcagag tccatgcctc ttctgctgga
     2401 gtgtgcaaga gtccggggtc ccgagtacct tacacagatg tggcacttca tgtgcgatgc
     2461 tctcatcaag gccattggca cggagcctga ctcagacgtc ctctcggaaa taatgcactc
     2521 ctttgctaag tgcattgaag tgatgggaga tgggtgtctc aacaatgaac acttcgagga
     2581 actgggaggt atactgaagg cgaagctcga ggaacatttc aaaaatcaag agttgcggca
     2641 agttaaaaga caagatgaag actacgacga acaggttgaa gagtcgctac aagatgaaga
     2701 tgataatgat gtttatatac tgactaaagt ctcagatatt ttacactcaa tattcagtag
     2761 ctacaaagaa aaggtgttgc cgtggtttga acagctgctc ccattaattg tcaacctgat
     2821 ttgtccacat agaccctggc cagacagaca atggggattg tgcatcttcg atgatatcat
     2881 agaacactgt agtccagctt catttaagta tgcagaatat ttcttaaggc caatgctcca
     2941 gtatgtatgt gacaacagcc cggaagtcag gcaagctgca gcatatggcc ttggcgtcat
     3001 ggcgcagtac ggtggagata actaccgccc cttctgtaca gaagcactcc cgctgcttgt
     3061 aagagtcatt cagtctgcag attctaagac caaagaaaat gtcaatgcca cagagaactg
     3121 catctcagca gtgggaaaga tcatgaagtt caagcctgac tgcgtgaatg tggaggaggt
     3181 cttaccacac tggctgtcgt ggctccccct acatgaagat aaagaagaag ctgtccagac
     3241 cttcagttac ctgtgtgacc tgattgaaag taatcatcca attgttcttg gcccaaataa
     3301 taccaatcta ccgaaaatat tcagtataat tgcagaagga gaaatgcatg aggccatcaa
     3361 acatgaagac ccctgtgcca aacgcctggc caatgtagtt cgccaagtac agacttctgg
     3421 aggattgtgg actgaatgca tagctcaact cagtccggag cagcaggcag ccatacagga
     3481 gctcctgaac tctgcctgaa gggccttaat accacctgcc agaagactaa ctccaaataa
     3541 acgtttaccc ttttgtttag gtttctttgt tttgtttttg agcaagagag agcagtagtg
     3601 ttgtgtgtag gccattcttc tggagccatg cgcaggaaaa gcagtcctgt gtgcagaatg
     3661 gactgccgtg gatctcctca gacccgcaga ggaggtccct gtaagccctg tggtagcact
     3721 gcagagtatt tttctattgc cgtgtctgac ccccgtgaag ggaaggggga aacaattcct
     3781 tttctcggta gacgcagaaa cgtaaggaga gcggctttca gatcagttca tccacataga
     3841 tgtgtgttac acagactggg ggacaaccta gtgttcgttc tgtaaatgga gtgagtctag
     3901 gggggagggg tagaaagaag cctttaccag ccaaccagct gcaaacaact gctgacaaac
     3961 cagaagcatg gggctgtcac gtgatgtcac tctggttctt tcccagaagg cttatgcagt
     4021 gactcggtgt ggaggctgtg ccactcccgg cccttgaatg tgaagtgtcg ttggcatgtc
     4081 tggcagtctc cttcactcct caataaacag cattgaaaca caaagaggcc tgtgtagaac
     4141 ttcagtgctg tctgtccttg attgctttca tgtttgatat aagagtgatc tgatattttt
     4201 ttaaggtgag agttctggct caatgtttcc cctccacact ctctgcagtg cggcctggga
     4261 agtgtgtgtg ctgtcttgga gttaatttaa gctcagttat aacacagcta ctctgttcat
     4321 aattggtatt ctgaaggttt gcaaattcaa ccagcttttc caaagctcgg attgttctgt
     4381 tgagcaaaaa gttttggctt aggattttca ttgcagactg taattgctca gagccacacg
     4441 cagctttcga agtttttaat tttacaagta ttatggctaa acttatttac tgaaaatttc
     4501 agtaaagtgt gtgaaatttt ctttatgtat taacatcaga gcagtaactg actagctgtt
     4561 gtttccttta agtaattttc taagggatct taaccgattt tctgttgaaa cctcggtgtt
     4621 aacgttttca tagtttgtac taaatttaac tgtgatacaa aatgagtttt atgcataaat
     4681 cagaatttaa aattaaatat ttctttcttt aaa
//
