LOCUS       NM_001007663            2306 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus integrator complex subunit 14 (Ints14), mRNA.
ACCESSION   NM_001007663 XM_217173
VERSION     NM_001007663.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082006.1.
            
            On Nov 29, 2004 this sequence version replaced XM_217173.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082006.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..2306
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /note="integrator complex subunit 14"
                     /db_xref="GeneID:300782"
                     /db_xref="RGD:1359616"
     exon            1..12
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            13..304
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            305..585
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     CDS             364..1911
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /note="UPF0464 protein C15orf44 homolog; von Willebrand
                     factor A domain-containing protein 9; von Willebrand
                     factor A domain containing 9"
                     /codon_start=1
                     /product="integrator complex subunit 14"
                     /protein_id="NP_001007664.1"
                     /db_xref="GeneID:300782"
                     /db_xref="RGD:1359616"
                     /translation="MPTVVVMDVSLSMTRPVSVEGSEEYQRKHLAAHGLTMLFEHMAT
                     NYKLEFTALVVFSSLWELMVPFTRDYNTLQEALSNMDDYDKTCLESALVGVCNIVQQE
                     WGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSESSRFPLPFPFPSKLYVMCMANL
                     EELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQSMFGKLIDLAYTPFHAALKC
                     GHLTADVQVFPRPEPFVIDEEIDPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPI
                     ALNKEGDEVGAGITDDNEDENSANQIAGKIPNFCVLLHGSLKVEGMVALVQLGPEWHG
                     MLYSQADSKKKSNLMMSLFEPGPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQ
                     PKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEKTQTFYKELNRLRKAALAFGFL
                     DLLKGVADMLERECTLLPDTAHPDAAFQLTHAAQQLKLASTEYAVYDLNITPLHTDFS
                     GSSTERM"
     exon            586..693
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            694..849
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            850..968
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1111
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..1204
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1205..1349
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1350..1483
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1484..1602
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1603..1668
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..2282
                     /gene="Ints14"
                     /gene_synonym="RGD1359616; Vwa9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatgggctcc gggcccagac tgcttgagtg aaacaacctt cagagacgtt ccattctttc
       61 gtttaccccg tgcttacaac ctgaaaacaa aattggattg gcacaagtcg gccagggctg
      121 aggaagtgca cttgagacct gacacaaatg catcagtccg gagaaagagc caagttccca
      181 ggtgtctgcg gagaaggcca gaccgacagc tgtggtcaca cattgccgtg ctaatagcaa
      241 tttcatggac tggaagtgct tgttgatact ggatccagac aactgtttcc taatctctta
      301 agagcatttc tctggttgta gctggctatc tgcactctga gggagtgcta gaattgttcc
      361 atcatgccca ctgtggtggt aatggatgta tccctgtcta tgacccgacc cgtgtctgtc
      421 gaggggtctg aagagtacca gcggaagcac ctggctgccc atggcctgac catgctgttt
      481 gaacacatgg ccaccaacta caagcttgag tttacagcgc tggtggtgtt ttcatcacta
      541 tgggagctga tggtcccctt tacgagagat tacaacactc tgcaggaagc actgagtaac
      601 atggatgatt atgacaaaac ctgcctggag tctgcattag tcggtgtttg caatattgtc
      661 caacaagaat ggggtggagc aattccttgc caggttgttc tggtgactga tggctgtctt
      721 ggcattggca gagggtcact gcggcactcc cttgccactc agaatcagag aagtgagagc
      781 agcaggttcc cgctcccctt tcctttccca tcgaagctat atgtcatgtg catggccaac
      841 ctggaggagc ttcagagcac tgactccttg gaatgccttg aacgactcat agacttaaat
      901 aatggtgaag ggcaaatttt tactattgat ggccccctgt gtttgaaaaa tgtacagtct
      961 atgtttggaa agctgataga cctggcgtac acacctttcc atgctgctct caagtgtggc
     1021 cacctaacag ctgatgtaca agtcttccct aggccagaac ctttcgttat agatgaagaa
     1081 attgatccca tccctaaagt cattaacaca gatttggaaa tagtgggctt tattgacata
     1141 gctgatattt ccagccctcc agttttgtcc aggcatttgg tcttgcccat agcactcaac
     1201 aaagaaggtg acgaggtggg tgctggcatc actgatgaca atgaagatga gaattcagcc
     1261 aatcagattg ctggcaaaat acccaacttc tgtgtcctgc tccatggcag cctaaaggtg
     1321 gaaggaatgg tggcacttgt tcaactaggt cctgaatggc atggtatgct ctactcccaa
     1381 gctgacagca agaagaaatc aaacctcatg atgtctctct ttgagcctgg cccagaacct
     1441 ctcccatggc ttgggaaaat ggcacagttg gggcccattt cagatgctaa agaaaaccct
     1501 tatggggagg acgacaacaa gagcccattc cccctgcagc ccaaaaacaa acgaagttat
     1561 gcccagaatg tgactgtctg gatcaagccc agcggcctgc agacagatgt acagaagatc
     1621 ttaagaaatg caaggaagct ccctgagaaa acacagacat tctataagga gctgaacagg
     1681 ctacgaaagg ctgccttagc ctttggtttc ctggacctgc ttaaaggggt ggccgacatg
     1741 ctggagaggg agtgcaccct gctgcctgac acagcccacc cagacgcggc attccagctt
     1801 acccacgctg cccagcagct caagctggcc agcactgagt atgctgtata tgacctcaac
     1861 atcacacccc tgcacacaga cttctcaggg agcagcacgg aaaggatgtg atgcgagccc
     1921 tgcagttcct tcacacttat ctgtctgaaa gtgatctaga gctaaaaccc tctccagctc
     1981 cttcagcacc cctcctgaga agctggacag acaggagaga gctcaggaag aagcctacta
     2041 taaggatgtt cttaaacttc tgtgtttgga acgagcaatc tagacgtcta caacttgcct
     2101 aagtataagc tgatgccatt gagtttccat tttttcctta gaccttgtta aaacacaagt
     2161 ggcgatgctc aggtacttct ggtgtatctc aaggtacaaa cttttagact gtagccacaa
     2221 tatgtgtcaa ccactcctgt tcatgtttta aatgaaaatt aaatatttga ttttctatga
     2281 aaaaaaaaaa aaaaaaaaaa aaaaaa
//
