LOCUS       XM_039111480            1850 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus insulin like 5 (Insl5), mRNA.
ACCESSION   XM_039111480
VERSION     XM_039111480.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111480.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 35% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1510              JACYVU010000162.1  32325166-32326675   c
            1511-1647           JACYVU010000162.1  32324890-32325026   c
            1648-1736           JACYVU010000162.1  32322516-32322604   c
            1737-1737           "N"                1-1
            1738-1850           JACYVU010000162.1  32322403-32322515   c
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1850
                     /gene="Insl5"
                     /note="insulin like 5; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: inserted 1 base in
                     1 codon; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 80% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:102554482"
                     /db_xref="RGD:7747960"
     CDS             1419..1850
                     /gene="Insl5"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: insulin-like peptide INSL5"
                     /protein_id="XP_038967408.1"
                     /db_xref="GeneID:102554482"
                     /db_xref="RGD:7747960"
                     /translation="MKGPALALFLLSVLLAVVEVRSRQIVMQFSYLLNQSSSFAWDFS
                     ELSVCGQSSEGHRKARHLHMDDYSMYEVRVQATEARNHLQLLDRQETSKETLEHNLPK
                     MCIQXQEGLWELKKHLVASRRDWRALCCREGCSMRELSILC"
ORIGIN      
        1 aatgagcttt ttacataaag gaattatttt aatatacatt tataaactat ttaaatcact
       61 gttcaactcc tctaagaact ttagctctcc ctactcctga cttcatgtct ggggaagcct
      121 taagaactac agaaaaaaag ggtgacagag attatattta ggatctagca gagcagctag
      181 gggccaactg caggttttat tagtgtctag agtgtttata ttcaggttag gttctggcct
      241 gttttaatgt ttctgtgata taatattctg accgaaagca atgtggggcc aaaggactac
      301 acttagacga tgtctcagtc tacctgtact gagggaagtt aggccagaaa ctgaaggcag
      361 ggaaccaaag gagaaaccat ggaggaacgg ttcttactgg ctcactccca ggttcatgct
      421 tagcgagctt tttctcagag cccaggatga tccgtgtcga gatggtacca catgcagtga
      481 tcgaaccctc ccacttcaat aatcaatcaa gagaattcct cagagataag gctgcaggtc
      541 agcctgatgg acagagctgg aattgagacg ttcttgctct caaacgactc tgagaaaact
      601 tctagtttag gtaagggcct caactggatg ccaaaagagg tattttatca tttggcaatt
      661 tggtaataca cttttgactt tattataata ggaatgtata ccaagacaga caaacccaac
      721 tcacaagcta agggtattaa ggaacattct agtcacagga attctgagct ctgaagaaaa
      781 gttatccttc ctagtctatt ctgatcctga ggtaagatgg tagccaagaa ataacttgtt
      841 gtgtaaagcg ggatgggcct gtctcgtcac ttctgtgggg tagtactatt accagcgttt
      901 ttttttttta aaataagagt aaacaacatt ttttaaattc taggtctggt gggaggaaag
      961 ccaggaatca aatctgagtc caacagacct caccactgtg tgatttccca tggcattgac
     1021 atagaagctg ctttgctccc cagaagcctc catcagatga ggtctcctat gttagagaga
     1081 tagcactatt gactttcaga ggttaaagct tgttctatgt cagtcagtaa atgccaagtg
     1141 ggcattcaaa cgtatgcgtc ccagcctcca aaagccttgt atttccatag caactcctga
     1201 gaagatgcaa caatgctaag ggaggtgtgt tcagagtgac cagcaataat cataaaagcc
     1261 ctccacatgg tcacctatgt gcttagtaaa tctgttaaaa taaggactga ccaataaagc
     1321 atccgaggga ttggtataaa tggcccaaga gagtgagata acttcaaaac gtcattgggc
     1381 agtgccgacc acatcgattc tcctttgctc ttggcaggat gaagggcccc gctcttgctc
     1441 tgtttctcct ctcagtcctg ttggctgtgg tggaagtaag aagcaggcag attgtgatgc
     1501 agttttctta tcttttgaat caaagcagtt catttgcatg ggacttcagt gagctcagcg
     1561 tctgtggtca gagcagtgaa ggccatagaa aggccagaca tctgcacatg gatgattaca
     1621 gcatgtatga ggttagagtt caggcaactg aggcaagaaa ccacctccag ctcctagaca
     1681 gacaggagac atctaaggaa actctggagc acaaccttcc caagatgtgt atccagngac
     1741 aggaaggtct ttgggaactg aagaagcact tggtagcatc cagacgagat tggcgagctc
     1801 tgtgctgcag ggaaggctgc tccatgaggg agctcagcat cctgtgttag
//
