LOCUS       NM_001013900            2073 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus INO80 complex subunit E (Ino80e), mRNA.
ACCESSION   NM_001013900 XM_215078
VERSION     NM_001013900.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Chen,L., Cai,Y., Jin,J., Florens,L., Swanson,S.K., Washburn,M.P.,
            Conaway,J.W. and Conaway,R.C.
  TITLE     Subunit organization of the human INO80 chromatin remodeling
            complex: an evolutionarily conserved core complex catalyzes
            ATP-dependent nucleosome remodeling
  JOURNAL   J Biol Chem 286 (13), 11283-11289 (2011)
   PUBMED   21303910
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Watanabe,S. and Peterson,C.L.
  TITLE     The INO80 family of chromatin-remodeling enzymes: regulators of
            histone variant dynamics
  JOURNAL   Cold Spring Harb Symp Quant Biol 75, 35-42 (2010)
   PUBMED   21502417
  REMARK    Review article
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079045.1.
            
            On Apr 20, 2005 this sequence version replaced XM_215078.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079045.1, FQ223207.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..2073
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /note="INO80 complex subunit E"
                     /db_xref="GeneID:293494"
                     /db_xref="RGD:1359572"
     exon            1..202
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     CDS             122..856
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /note="coiled-coil domain-containing protein 95;
                     coiled-coil domain containing 95"
                     /codon_start=1
                     /product="INO80 complex subunit E"
                     /protein_id="NP_001013922.1"
                     /db_xref="GeneID:293494"
                     /db_xref="RGD:1359572"
                     /translation="MNGPADGEVDYKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLL
                     KVSRDKSFLLDRLLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPMG
                     GAPSPSSLSLPPSSGFPLQTSGAPSPYLSSLASPPYPPFPSDYLALQLPEPSPLRPKL
                     EKRPRLPRKLKMAVGPPDCPVGGPLAFPARGSGASVGAALTPLPPPKMPPHTILSTVP
                     QQMFSDAGSGDDALDGDDDLVIDIPE"
     exon            203..273
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     exon            274..326
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     exon            327..405
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     exon            406..517
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     exon            518..634
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
     exon            635..2044
                     /gene="Ino80e"
                     /gene_synonym="Ccdc95"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccggaagtgg aggggtgtgt gcgtgtgtgt atgtgtgtgt gtgtgtgtgt gtgtgagaga
       61 gagaggacgg gcggacttgg gtagcgggac tctactccgg ggcgcttctc ccaggcgggt
      121 catgaacgga ccagcggacg gcgaagtgga ctacaaaaag aaatacagga atctgaagcg
      181 gaagctcaag ttcctcattt acgaacacga gtgcttccag gaggagctca ggaaggcgca
      241 aagaaaattg ctgaaggttt cccgagacaa gagtttcctt ctagatcgac ttctgcagta
      301 tgagaacgtg gatgaagact cttccgattc agatgccact gcgtcttcag acaacagtga
      361 gaccgaaggg acgcccaagt tgtcggacac accagcccct aagaggaaga gaagcccccc
      421 gatgggaggt gccccatccc cttccagcct ctcattgcct ccttcatcag gatttcccct
      481 gcagacttct ggggccccct ccccatacct gagctcgctg gcttctcccc cttacccccc
      541 attcccttct gactacctgg ccctgcagct gcctgagccc agccccctga ggcccaagct
      601 ggagaaacgg ccccgcctac cccggaaact caagatggcg gtgggccccc ctgactgccc
      661 tgtgggtgga ccgctggctt tccctgccag gggttctggt gccagtgttg gggcagctct
      721 gacccccctg cctcctccca agatgcctcc acatacaatc ctgagcaccg tccctcagca
      781 gatgttcagc gatgccggca gcggagatga tgccctagac ggagatgatg acctggtgat
      841 cgacatcccg gagtagccac tcagtgctac ctgccaggca ccccgcccag tgctcctcct
      901 gagccagcac actgagccca cttcctcaag agatgtttat tgatgcccag ttgccatgct
      961 tcggccactg acacaatcag aaaaggcgta aacatgcaca aatgtccccg aggaaggtgg
     1021 caggggccct gcccttacac ccacccccat cctgggaaca attatttaat gagtggccaa
     1081 aagggtctgc tacatcttag gaaggtagag acccttggtg gccgcccctt tagaagagca
     1141 gctgcgcagg gctgggacat tttaatgaag gctctgtatt aaagagttgg ctctttcttt
     1201 ccttatcctt tcctctattt ggaaatgtcc tcctctaatc tcccctaatc ccaccccctc
     1261 cttgtggggc aggggaccag gcagcctgga gaggccaaga gaggagctgc aggattgggt
     1321 ggggcactgg caggagactc ccacgtagcc ctgtgcatgg ggtggttgca tatttgcagg
     1381 taagagcaag tcaggcagga ggaagtttgc atatgtgaat atagctctcc acatccctca
     1441 caagaagata gacccacggt cacagagact cacaaaaata agacaggtag tgtggggcag
     1501 gggcgtccca cccatgtaaa cgtgcaacac actcgtgcga aggttgggta ctggacccgg
     1561 ccgcagaggg cctgtgctgg gcagctgcag tctgttcagg ccaacggcaa cgcccctgct
     1621 gctgggggca gctcgctggt cagggtatgc cagcgctcca ctgctgtgtc cggctgatgt
     1681 agacagtctc tccagtgttt ctgggcctct ccccgggctc ctggccccag agacacacca
     1741 cctgaagaac aggcaaggca ggccaacctg tcagtgccca ctctcttcca cttccctgac
     1801 acctggtgga ctcctccact cacctatgaa gtcattggat ttgccaatgt cgtagtccca
     1861 gactgtgact tccagggtct tggtagccag agtggagagt tccatctcat aaaagaattc
     1921 ctgagaacaa ggcaggaggt gctttctgag agaccttctc acattgctct ccccagacca
     1981 tcttgatttc tgctccctgc catttttacc tcattaaatt ccgggttcag cgtcttcttc
     2041 tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
