LOCUS       XM_039107453            1641 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inhibitor of growth family, member 4
            (Ing4), transcript variant X3, mRNA.
ACCESSION   XM_039107453
VERSION     XM_039107453.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107453.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1641
                     /gene="Ing4"
                     /note="inhibitor of growth family, member 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 ESTs, 8 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 121 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297597"
                     /db_xref="RGD:1309407"
     CDS             53..793
                     /gene="Ing4"
                     /codon_start=1
                     /product="inhibitor of growth protein 4 isoform X3"
                     /protein_id="XP_038963381.1"
                     /db_xref="GeneID:297597"
                     /db_xref="RGD:1309407"
                     /translation="MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDK
                     LATEYMSSARSLSSEEKLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT
                     DLARFEADLKEKQIESSDYDSSSSKEGRTQKEKKAARARSKGKNSDEEAPKAAQKKLK
                     LVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEW
                     FHFACVGLTTKPRGKWFCPRCSQERKKK"
ORIGIN      
        1 tcgtttcagt cacttccggg gaggatcgga agttgctttg ttttgcttca agatggctgc
       61 tgggatgtat ttggaacatt atctggacag tattgaaaac ctcccgtttg aattgcagag
      121 aaactttcag ctcatgaggg acctagacca aaggacagag gacctgaagg ctgaaattga
      181 caagttggcc actgaatata tgagtagcgc ccgcagcctg agctccgagg aaaaactggc
      241 ccttctcaga cagatccagg aggcctatgg caaatgcaag gaatttggtg acgacaaggt
      301 gcagctggcc atgcagacct atgagatggt ggacaaacac attcggcggc tggacacaga
      361 cctggcccgt tttgaggctg atctgaagga aaaacagatc gagtcaagtg actatgacag
      421 ctcttccagc aaagaaggcc ggacccaaaa ggagaaaaaa gctgcccgtg cccgttccaa
      481 agggaaaaac tcagatgaag aagcccccaa ggctgcccag aaaaagttaa aacttgtgcg
      541 cacaagtcct gagtatggga tgccctcagt gacctttggc agtgtccacc cctctgatgt
      601 gttggatatg cctgtggatc ccaacgaacc cacatattgc ctttgtcacc aggtctccta
      661 tggagagatg attggctgtg acaacccaga ctgttccatt gagtggttcc actttgcctg
      721 tgtggggctg acaaccaagc ctcgagggaa atggttttgc ccacgctgct cccaagaacg
      781 gaagaagaaa taggtttcct tggattccat cagagacttc ttctgaatcc ccctgacctg
      841 ggctagtgga cagagagggg tgcctgtgct ggggatgggg gtccagggag atggggacag
      901 tgcagtaccg tcatcccttc tcccttctcc ccattcggtg ctgaggctgc atccaaaccc
      961 cagtagagaa ggtgccacag ccactgacgg gatgtgctct ccttccccgc ctcgccctca
     1021 gaggaagtag tcccactcac tgtccttttg cctccgtggg gaggttggtg ctgtgtttca
     1081 gagggagggt cctcttcatt ccccttgctt tgacttagaa gtgggcagtg gagtgggcac
     1141 tctcccagtc ccctcaatcc tccttccccc attgggaact aggtaggaca gactgccttc
     1201 tctgtgctct tccttttctc catggggagg gtcttctagg tcatttgggc tgtggcctag
     1261 ttgagtggtt accccaacct ctatggcccg gggaattctg ctgactttga atgggagagg
     1321 gaaggtggag cccagatagc tcacatgtaa agggagtcgg ggtagtaaat aaaagctatc
     1381 cacgctagcc tctgtgttta ttgtagagac tgtttacgta tatgtggtaa gcattctttt
     1441 tgcattctct ggattggatg agaggcagga ggatggcttg ccagaaatag gacaagacat
     1501 aaaacccaaa atggtctttg tcctgtggta tcctcagctt ctccacctgg agggtgccgg
     1561 catcggggac tcagaacttt gtaattacga gtacgcgctc cgcgaaacac ctttcactca
     1621 ataaatcatg tatttgcttt a
//
