LOCUS       XM_039113400            4701 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inverted formin 2 (Inf2), transcript
            variant X1, mRNA.
ACCESSION   XM_039113400
VERSION     XM_039113400.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113400.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4701
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4701
                     /gene="Inf2"
                     /note="inverted formin 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 40 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:362790"
                     /db_xref="RGD:1308350"
     CDS             93..3995
                     /gene="Inf2"
                     /codon_start=1
                     /product="inverted formin-2 isoform X1"
                     /protein_id="XP_038969328.1"
                     /db_xref="GeneID:362790"
                     /db_xref="RGD:1308350"
                     /translation="MRSWRQGPEWVGRGSRKVLRIWFNKMSVKEGAQRKWAALKEKLG
                     PQDSDPTEANLESAEPELCIRLLQMPSVVNYSGLRKRLESSDGSWMVQFLEQSGLDLL
                     LEALARLSGRGVARIADALLQLTCISCVRAVMNSQQGIEYILSNQGYVRQLSQALDTS
                     NVMVKKQVFELLAALCIYSPEGHALTLDALDHYKMVCSQQYRFSVIMNELSDSDNVPY
                     VVTLLSVINALILGPEDLRTRAQLRSEFIGLQLLDILTRLRDLEDADLLIQLEAFEEA
                     KAEDEEELQRVSDGINMNSHQEVFTSLFHKVSCSPASAQLLSVLQGLMHLEPAARSGQ
                     LLWEALENLVNRAVLLASDAEACTLEEVVERLLSIKGRPRPSPLDKAHKSVQTNLGQN
                     QGSSSQNTATPTAKVEGRQPVVASPCQHVGSIQSSSMDAAPQLAASPLPTPPLSSSTP
                     VLPPPPPPLPGSGATSPPAPPPPPPLPPPLPGSGTMSPPPPPPPPLPPPLPGLGAVSP
                     PPPPPPPPLPGSRAVSPPAPPPSLPHSHPLPPPPPPPPLPGMCPVPPPPPLPTAGQVP
                     PPPPLPGFSVPSVVGGVEEIIVAQVDHSLGSAWVPSHRRVNPPTLRMKKLNWQKLPSN
                     VARERNSMWATLSSPCTAEVEPDFSSIEQLFSFPMAKPKEPSAAPARKEPKEVTFLDS
                     KKSLNLNIFLKQFKCSNEEVTGMIQAGDTSKFDVEVLKQLLKLLPEKHEIENLRAFTE
                     DRAKLASADQFYILLLDIPCYQLRVECMMLCEGTAIVLDMVRPKAQLVLTACESLLTS
                     QRLPVFCQLILKIGNFLNYGSHTGDADGFKISTLLKLTETKSQQSRVTLLHHVLEEVE
                     KSHPDLLQLSRDLESPSQAAGIHLEIIHSEASANLKKLLEAERKVSSSIPEVQKQYAE
                     RLQASIEASRALDKVFDAIEQKKLELADYLCEDPQKLSLEDTFSTMKTFRDLFTRALK
                     ENKDRKEQMAKAEKRKQQLAEEEARRPRDEDGKPVRKGPGKQEEVCVIDALLADIRKG
                     FQLRKTARGRGDTEASGRVAPADPPKITEPATASNPTQGTNQPASEPSSDTTAAGEPQ
                     GWDLVDAVTPSPQPTKEDGGPPSLERRSSWYVDASDFLAPEDILNTQPSEGAWPVTLG
                     DDQALKPLEFSSNKPPGVERSHQDATDPEALWGVHRAEADSTSVRPEDATERGQGTHL
                     PRPGEDEDEEDTALESALDTSLDRSFSEDAVTDSSGSGTLPRVQGRISKGTGKRRKKR
                     PSRRQEGPGTSPCYPAGPSLTPAGTPGSTSIQERGVCP"
ORIGIN      
        1 tccgtggtaa agctgccacg tctacaacac caagacgtac ttcaggggtc taacactccc
       61 caggagggac caggtccagg ctggcagcag ggatgagaag ttggaggcaa ggccccgaat
      121 gggtgggcag aggcagccgt aaagtcttgc gtatctggtt taacaagatg tctgtaaagg
      181 aaggcgccca gcgcaagtgg gcagcactga aagagaagct ggggcctcag gactcagacc
      241 ccacggaggc caacctggag agtgctgagc ccgagttgtg catccggctg ctgcagatgc
      301 cctccgtggt caactactcg ggcctgcgca agcgcctgga gagcagtgat ggcagctgga
      361 tggtgcagtt cctggagcag agcggcctgg acctgctgct ggaggcgctg gcacgactgt
      421 cagggcgtgg ggtggcccgc attgcggacg ccctgctgca gctcacctgc atcagctgtg
      481 tgcgtgcagt catgaattca cagcagggca tcgagtacat cctcagcaac cagggttatg
      541 tgcgacagct ctcccaggcc ctggacacct ccaacgtcat ggtcaagaag caggtgtttg
      601 aactgctggc tgctctgtgc atctactcac cggagggcca tgcactgacg ctagatgccc
      661 tggaccatta caagatggtg tgcagccagc agtaccgctt cagcgtcatc atgaatgagc
      721 tctcggacag cgacaacgtg ccctacgtgg ttaccctgct cagtgtgatc aacgctctca
      781 ttctgggccc cgaggacctc cgcactcgtg cccagctgcg gagtgagttc atcgggctac
      841 agctgctgga tattctgacc cggctccgag acttggagga tgcggatctg ctgatccagc
      901 tggaggcctt cgaagaggcc aaagcggagg atgaggaaga gcttcagcga gtcagtgacg
      961 ggatcaacat gaacagccac caggaagtct tcacctcact gttccacaag gtgagctgtt
     1021 ccccagcgtc ggcccagctg ctgtcagtgc tgcagggtct catgcacctg gaacctgccg
     1081 cccgttcagg ccaactgctc tgggaggccc tggagaacct ggtgaaccgg gccgtgcttc
     1141 tggccagtga cgccgaggcc tgcaccctgg aggaggtggt tgagcgactt ctgtccatca
     1201 aagggcggcc ccgaccaagc cccctggaca aggcccataa gagcgtgcag accaacttag
     1261 gccagaatca gggcagttcc tcccaaaaca ctgctactcc cacagctaaa gtggaaggcc
     1321 ggcagccagt agtggcttct ccatgccaac atgtgggcag catccagagc tccagcatgg
     1381 acgcagctcc acagctagca gcctcacccc tgcctacccc accactctcc agctccaccc
     1441 ctgtgctccc tccaccccca ccgcccctgc caggctcagg ggccacatct cccccagcac
     1501 ctcctccacc cccacccttg ccgccccctt tgccaggctc agggaccatg tctccccctc
     1561 cccctccacc cccacccttg ccaccccctt tgccaggctt aggggccgta tctccccctc
     1621 cacccccacc cccacctccc ctaccaggtt caagggctgt gtctccccca gcaccacctc
     1681 catctctgcc tcactcccac cccctgcccc cacccccgcc cccaccccca ctccctggca
     1741 tgtgcccagt tcctccccct cccccactac ccacagcagg ccaggtccct ccaccccctc
     1801 ccctgcctgg attctctgtc ccctccgtgg tgggtggtgt ggaggagatc attgtggccc
     1861 aggtcgacca cagcctgggc tcagcctggg tccccagtca ccgcagagtg aatccaccca
     1921 ccctgcgaat gaagaagcta aactggcaga agctgccatc caatgtggca cgagagcgca
     1981 actccatgtg ggcaacactg agcagcccct gcacagccga agtggaacct gacttctcca
     2041 gcattgagca gctgttctcc ttccccatgg ctaagcccaa ggaaccctct gctgcccccg
     2101 ccaggaagga acccaaagaa gttacttttc tggactccaa gaagagcctg aacctcaaca
     2161 tcttcctgaa gcaatttaaa tgttccaatg aagaagtcac cggcatgatc caggctggag
     2221 acacaagcaa gtttgatgtg gaggttctca aacagctcct aaagcttctt ccagagaagc
     2281 acgagattga gaacctacgg gcgttcaccg aggatcgagc caaattggcc agcgctgacc
     2341 agttctacat tctcctcctg gacattccct gctaccagct gcgggtggag tgcatgatgc
     2401 tgtgcgaggg cacagccatc gtactggaca tggtgcggcc caaggcccag ctggtgctca
     2461 ccgcctgcga gagcctgctc accagccagc ggctgccggt cttctgtcag ctgatcctca
     2521 aaattggcaa tttcctcaac tatggcagcc acacgggaga tgcagatggc ttcaagatta
     2581 gcactttgct gaagctcaca gagaccaagt cccagcagag ccgtgtgacg ctgctgcacc
     2641 atgtgctgga ggaagtggag aagagccacc cggacctcct gcagctgtcc cgggacctgg
     2701 agtcgccctc tcaagctgca ggaatccact tggagatcat ccactcagag gccagtgcca
     2761 acctgaagaa gcttctggaa gcagagcgga aggtgtcctc ctcaatccct gaggtgcaga
     2821 agcagtatgc tgagcgcctg caggccagca ttgaggcctc ccgggcgctg gacaaggtgt
     2881 ttgacgccat tgagcagaag aagctggagc tggctgacta cctgtgcgaa gacccccaga
     2941 agctgtccct agaggacacg ttcagcacca tgaagacctt ccgagacctc tttacccgtg
     3001 ccctgaagga gaacaaggac cggaaggaac agatggcaaa agcggaaaag agaaaacagc
     3061 agctggcgga ggaggaggca cggaggccga gggatgagga cgggaaacct gtcaggaagg
     3121 ggcctgggaa gcaagaagag gtgtgtgtca tcgatgccct gctggccgac atcaggaagg
     3181 gcttccaact gcggaaaaca gcccggggcc ggggagacac cgaagcaagt ggcagagtgg
     3241 ctccagcaga tcctccaaaa atcacagagc ctgcaactgc cagcaatcct acccagggca
     3301 caaaccagcc tgcctcagag ccaagctctg ataccacagc agccggcgag ccacagggct
     3361 gggaccttgt ggacgctgta acccccagcc cccagcccac caaagaggac ggtggtccgc
     3421 catccctgga gaggcgttcc tcctggtatg tggatgccag cgacttcctg gcccctgaag
     3481 acatcttaaa cacccagccc tctgagggcg cctggccagt gactctggga gatgatcaag
     3541 ctctgaaacc ccttgagttc tctagcaata agcctcctgg ggtggagcgc tcacaccagg
     3601 atgctacaga tcctgaagcc ctctggggtg tccaccgagc cgaggctgac agcaccagtg
     3661 tgcggccaga ggatgctact gagcgaggac agggcaccca cctccctcgc cctggagagg
     3721 atgaggacga agaggacacg gccctagaat ctgcactcga cacctccctg gacaggtcct
     3781 tctctgagga tgcagtgaca gattcctcag ggtctggcac cctccccagg gtccagggcc
     3841 ggatctcgaa agggacaggc aagcggagga agaaacgccc ctcaaggcgc caagaagggc
     3901 ctgggacctc tccctgctat cctgctggtc cctcccttac ccctgcgggt actccaggct
     3961 caaccagcat ccaggagaga ggagtttgcc cctgattctg atgataataa ggcaaaaagg
     4021 ctgtgtgtga tccagtgagg cctcaggtcc aggcccaaag ccaagtgact gccctcatcg
     4081 gctcagcaca tcggcgggtg ctggatgtgc cgcctgcaga ggctcttcgg ggccaggctg
     4141 ggactgggcc cctgagaaaa cccaaactct gtgccttacc cagtcaggat ccttgggagc
     4201 cttggccctc gatgccagga cctggcctag catcaccctg ggccacctgc acgttcatgg
     4261 cctcaccatc tgctttgcga accactaccc accccctgtc gcatgcacct tccacccctg
     4321 cggtgtctga ctctagggag ataggtacag atgtctgtga tgggctgaga catcccccac
     4381 cccccacggc tcattggttt cttttagctg agtgctgttt tctgtgtctt tactctgcta
     4441 tgatgacttg gggggttagt gagggcctga gggatgcttg ttggaagtac tgtgggtagg
     4501 gcctggtagg tccttaggga acaaacaaac aaaaggctca tctgctcctg ggtggtgacc
     4561 tggccacagc acctgtcatc tcccttggtg tctgcccagt ggggacgagc ttccctggct
     4621 caacccctat caggtgtgca ctgttgagtc tgcgggccag ccgggacttt aaccaataaa
     4681 gagcaacctt gtctgtcatg a
//
