LOCUS       XM_039096608            3468 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inositol monophosphatase 2 (Impa2),
            transcript variant X1, mRNA.
ACCESSION   XM_039096608
VERSION     XM_039096608.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096608.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3468
                     /gene="Impa2"
                     /note="inositol monophosphatase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 33 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:282636"
                     /db_xref="RGD:628692"
     CDS             55..906
                     /gene="Impa2"
                     /codon_start=1
                     /product="inositol monophosphatase 2 isoform X1"
                     /protein_id="XP_038952536.1"
                     /db_xref="GeneID:282636"
                     /db_xref="RGD:628692"
                     /translation="MSLCWSCCDARLTRCLEKHTVLGRDKTIIRKALTEEKHVSTKTS
                     AADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTC
                     NFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDL
                     AKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLASGAADAYY
                     QFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMSCRVVAAGTREMAVLIAQALQTIN
                     YGRDDEK"
ORIGIN      
        1 acagggctgg caccgtccac atgatgcttg ctgagcttta tctgcttgtg gaggatgagc
       61 ttatgctgga gctgctgtga tgcaaggctc actcgctgcc ttgaaaagca cacagtcctg
      121 ggaagagaca agacgatcat cagaaaggcc ctcactgagg aaaaacacgt ctcgacgaaa
      181 acatctgctg cagatcttgt gacagaaaca gatcaccgag tagaagactt aattgtttct
      241 gagttgcgaa agcggttccc ttcacacagg ttcattgcag aagaggccac agcctccggg
      301 gccaagtgtg tgctcaccca cagcccgacc tggatcatcg accccatcga cggcacctgc
      361 aactttgtgc acagattccc cactgtggca gttagcatcg gatttgctgt tcaccaggag
      421 ctggaattcg gagtgattca ccactgcaca gaggagcggc tgtacaccgg caggaggggc
      481 cagggcgcct tttgcaatgg ccagaggctc caggtctcca gggagacaga tctcgcaaag
      541 gccttggttc tgacagaaat cgggcccaaa cgtgaccccg atactctgaa agtattcctg
      601 agcaacatgg agcggctgct gcacgccaag gctcatgggg tccgagtgat tggcagctcc
      661 accttggcgc tctgctactt ggcctcgggg gctgctgatg cctattacca gttcggcctc
      721 cactgctggg atctggcagc tgccacagtc atcatcagag aagcaggtgg cattgtgatt
      781 gacacctcag gtggacccct tgacctcatg tcgtgcagag tggtggctgc tggcaccaga
      841 gagatggcag tgctcatagc tcaggcccta caaaccatta actacggccg ggacgatgag
      901 aagtgagccg tacagagctc taaggctgac atgagcagct ccctgggaaa gagctgtcca
      961 ggggcttgag ttccgggata gtctaccata gctgtccccg gacctcggtg cttagctgat
     1021 cctctctaat ctcgggtagc ccctttccag gtcggtacat ggtctttcat cagagccaaa
     1081 cccaaatctt gtgaggtgtg ttagtcaccc atcctggttg ttcggaatgc aaatctcagg
     1141 taataaagct ttagaacgag ttctcaggcc ctcccctgcc cgtggtgata cagaacgcaa
     1201 taaatcagaa ctttagtgtc gtgctctggg tcttcctcca gcccctggtt ctcaggccgg
     1261 gctgctcctg ctgttaccct gcaggtcttc gctcagcttg ggtgtctggc aaccccgacc
     1321 gaccgtggca acggtgaaaa ctttccctaa atatcagtct cctgatctac aggctctgtt
     1381 taaccacatg gagataatct ctagccgttt tttttttttt tttttatacc gccttcagtt
     1441 gaccttcagg gagtacgtgt actgtataaa ctaaaatgct gtgtgcagaa cctttgacat
     1501 ggaaaaaatg agaaactgaa aaacaatgct aaaatatttt gtgacgagcg ttttttataa
     1561 acataaaatc ttttaggaat tgcaactttt aaacaatgaa gttttttttg gggggggggt
     1621 gtcactgggg tagaactcag gccctggtgt agattagaca gactgtatac cactgagtga
     1681 ggtcccagca cgagggacca gaattctggt tccaggttaa gctgtggccc tagactgttg
     1741 agccaggtgg cgtagacaag gcccagatga ttctgaaaca tctgggcgag caaggccttg
     1801 ggtccttttc tatcttgaga acccggtcag ttctacacct gccgggccac aggtgctgtc
     1861 agggagacag cacttcctcc cttctgtgct agaaaaagca tttttcttaa ttagtaggaa
     1921 gtttgcatgt ttcccttgtt ctggctataa cataacatga gctctgtgct tgtcaagcac
     1981 cctttctctt tgaggaaaag gtctgtcacc tgtggctaca ccggccacac ggagctctcc
     2041 gtccattttc ttcctgagat cagtcgccct ggtcttttca agctactgaa tgcacccaaa
     2101 agcagctgag cccctttgag atggccgtcg ggttcatctc cagaaaccgt tttctgtctt
     2161 aatgggattg tatatacgta gtcattctcc atgggtgaac tgttctgttt ctatgagaag
     2221 ggatttcatg aaccccaggc tggcctggaa ctttctatat aaccaaggat ggccttgaat
     2281 tcctgatctt ccaggctcta ccctcccctc cccctcactg ctgggattac agacgtgtgc
     2341 taccgtgcct gccagtaaga tgcttcctga tttaccccag taggccggca tttgtacctt
     2401 tttttcccct cagaatagca ctaacatttg cacagataca caagaaattc ctcagaccct
     2461 tcaacaatta tgaattgggc tgaatgatta tgagggttat tttcaaatta tcctcaggaa
     2521 caagctgccc ttgggtcctc agagcactca cacaagctgt gtctgcgcta atccaagaga
     2581 gggctctggg gaacagggaa gccccgaggt tgggccaggc agggaccctt gcttgtttgc
     2641 cttcactcat tacttgaagg acctgctagg aacagagctg tgctgcttca ggtcacccac
     2701 ccaacctccc actcaggaca tttttatttc tgtttcaaac agtatccatc ttgcttggtg
     2761 gtcagtgagt ccatcccttc agaattctaa tcagcttcca cacactttcc cataactccc
     2821 ctctctatct caaaagcttc gctgatagca tcctgtaggg cagtggttct taacctgtgg
     2881 atcacgactc ctctgggggg agttacctga gaccatcaga acacacattt atactatggt
     2941 ttgtaacagt agccaagtct cagttataaa atggcaacag aaataatttt agggtcaaca
     3001 tgaggaactg tgttaaaggc tcgcagcact gggaaggttg agaaccactg ccgtaaagga
     3061 aagacctgtc tttatcaatt aaccaaatga taaaaccctg ccatccttag cagagtgtca
     3121 gtcaggtgtg ggtctgtgtt ctggttcgtg tcctcaggaa agccactggc ctctcgcttc
     3181 cggcatgccc ttctatcagg actcttgagg gacgtcactg ggcattatag aaaagccaac
     3241 acgtgcaaag caccaggtag tggattatct ccaacgttct cgtaacaacc acagcacagt
     3301 gtcctgcaca agttcttccg tgaagctgag ggaaggggct ggttagtccg atggtcaaga
     3361 acagtggtgt ctgtcacatt ttatcaaagt aatggcctgt tgctgtcttg tctgttcttt
     3421 taaaaataat ttgacacata acaatgtaaa agttatatgt ttatgaga
//
