LOCUS       NM_001399643             924 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus inner mitochondrial membrane peptidase subunit 1
            (Immp1l), transcript variant 2, mRNA; nuclear gene for
            mitochondrial product.
ACCESSION   NM_001399643 XM_017592187
VERSION     NM_001399643.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Mossmann,D., Meisinger,C. and Vogtle,F.N.
  TITLE     Processing of mitochondrial presequences
  JOURNAL   Biochim Biophys Acta 1819 (9-10), 1098-1106 (2012)
   PUBMED   22172993
  REMARK    Review article
REFERENCE   2  (bases 1 to 924)
  AUTHORS   Burri,L., Strahm,Y., Hawkins,C.J., Gentle,I.E., Puryer,M.A.,
            Verhagen,A., Callus,B., Vaux,D. and Lithgow,T.
  TITLE     Mature DIABLO/Smac is produced by the IMP protease complex on the
            mitochondrial inner membrane
  JOURNAL   Mol Biol Cell 16 (6), 2926-2933 (2005)
   PUBMED   15814844
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 12, 2022 this sequence version replaced XM_017592187.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.378862.1,
                                           SRR26360176.1311927.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                JAXUCZ010000003.1  112840139-112840210
            73-178              JAXUCZ010000003.1  112844678-112844783
            179-288             JAXUCZ010000003.1  112858204-112858313
            289-422             JAXUCZ010000003.1  112876102-112876235
            423-511             JAXUCZ010000003.1  112878386-112878474
            512-638             JAXUCZ010000003.1  112882407-112882533
            639-749             JAXUCZ010000003.1  112903048-112903158
            750-924             JAXUCZ010000003.1  112904123-112904297
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q33"
     gene            1..924
                     /gene="Immp1l"
                     /note="inner mitochondrial membrane peptidase subunit 1"
                     /db_xref="GeneID:691145"
                     /db_xref="RGD:1587441"
     exon            1..72
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            73..178
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            179..288
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            289..422
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             318..818
                     /gene="Immp1l"
                     /note="IMP1 inner mitochondrial membrane peptidase-like"
                     /codon_start=1
                     /product="mitochondrial inner membrane protease subunit 1"
                     /protein_id="NP_001386572.1"
                     /db_xref="GeneID:691145"
                     /db_xref="RGD:1587441"
                     /translation="MLRGVLGKAFRLAGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPT
                     IQNSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSSICKRVIGLEGDKILADNPPDIF
                     KSRNYVPTGHVWLEGDNLENSTDSRCYGPVPYGLIRGRIFFKIWPFSDFGFLRDSPNG
                     HRFSDD"
     exon            423..511
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            512..638
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            639..749
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
     exon            750..924
                     /gene="Immp1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtaagcggcc caggtgaacc cggtccatct gagttctggg tgaggaactt ctgttggtgt
       61 ttggggccgc aggaactgga aaccatggat gactcacaca cgctttgaga cttcatgtag
      121 atctgggttt tcttggaaac ctaccataaa gctgaacgaa ttgtggaaca gacctatggt
      181 agaattagaa ttttgaagca cagccttcaa ggcacaagcc tgtaatccca gttacttggg
      241 aagtggaagc aagacatttg cagattcaag gccggcctgg gccacaaggc tggcggtggc
      301 agagtcaaca tcaaagtatg cttcgtggtg ttctgggaaa ggccttccga cttgctggct
      361 ataccattca gtatggctgt atagctcact gtgcttttga atacgttggt ggtgttgtaa
      421 tgtgttctgg accatcgatg gaacctacaa ttcaaaattc agatattgtc tttgcagaaa
      481 atcttagccg acacttttat ggcatccaaa gaggtgacat tgtaattgca aaaagtccga
      541 gtgacccaaa atcaagtatc tgtaaaagag taattggttt ggaaggggac aaaatccttg
      601 ccgataatcc acctgacatc tttaagagcc gtaactatgt accaacaggt cacgtttggt
      661 tagaaggtga taacttagag aattctaccg attccagatg ttacggacct gtaccatatg
      721 gactcataag aggacggatc ttctttaaga tttggccttt cagtgatttt ggatttctgc
      781 gtgacagccc aaatggccac agattttctg atgattaata agtatttcct tttaatttga
      841 ttattgtctc ctattcaagt gactttattc ttactacagt tgaaaccgtg aacttaacaa
      901 taaactattt gctattcagt ttta
//
