LOCUS       XM_008769713            7885 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus immunoglobulin-like domain containing
            receptor 2 (Ildr2), transcript variant X1, mRNA.
ACCESSION   XM_008769713
VERSION     XM_008769713.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769713.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008769713.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7885
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7885
                     /gene="Ildr2"
                     /note="immunoglobulin-like domain containing receptor 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 20 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685277"
                     /db_xref="RGD:1596420"
     CDS             135..2075
                     /gene="Ildr2"
                     /codon_start=1
                     /product="immunoglobulin-like domain-containing receptor 2
                     isoform X1"
                     /protein_id="XP_008767935.2"
                     /db_xref="GeneID:685277"
                     /db_xref="RGD:1596420"
                     /translation="MDRVVLGWTAVFWLTAMVEGLQVTVPDKKKVAMLFQPTVLRCHF
                     STSSHQPAVVQWKFKSYCQDRMGESLGMSSPRAQALSKRNLEWDPYLDCLDSRRTVRV
                     VASKQGSTVTLGDFYRGREITIVHDADLQIGKLMWGDSGLYYCIITTPDDLEGKNEES
                     VELLVLGRTGLLADLLPSFAVEIMPEWVFVGLVILGIFLFFVLVGICWCQCCPHSCCC
                     YVRCPCCPDSCCCPQALYEAGKAAKAGYPPSVSGVPGPYSIPSVPLGGAPSSGMLTDK
                     PHPPPLAPSDSTGGSHSVRKGYRIQADKERDSMKVLYYVEKELAQFDPARRMRGRYNN
                     TISELSSLHDDDSNFRQSYHQMRNKQFPMSGDVESNPDYWSGVMGGNSGTNRGPALEY
                     NKEDRESFRHSQPRSKSEMLSRKNFATGVPAVSMDELAAFADSYGQRSRRANGNSHEA
                     RAGSRFERSESRAHGAFYQDGSLDEYYGRGRSREPPGDGERGWTYSPAPARRRPPDDA
                     ALPRLVSRTPGTAPKYDHSYLSSVLERQARPESNSRGGSLETPSKLGAQLGPRSASYY
                     AWSPPATYKAGASEGEDEDDAADEDALPPYSELELSRGELSRGPSYRGRDLSFHSNSE
                     KRRKKEPAKKTGDFPTRMSLVV"
ORIGIN      
        1 ccgagggctg ctgcgccagg gacgcgctgg gcccgcgctc cgccgccgcc tgctgccgcg
       61 aggtcatcga gatcctagcg tgccagccgc tgccagcttt ccccactctg gatctgaatg
      121 ggaagttggg gaaaatggat agggtcgtgt tggggtggac cgctgtcttc tggttaacag
      181 ccatggttga aggcctccag gtcacagtgc ccgacaagaa gaaggtggcc atgctcttcc
      241 agcccaccgt gcttcgctgc cacttttcca cgtcgtccca ccagcctgct gtggtacaat
      301 ggaagttcaa atcctactgc caggatcgca tgggagaatc cttgggcatg tcttctccca
      361 gagcccaagc cctcagcaag aggaacctgg aatgggaccc ctacttggat tgtctagaca
      421 gcagaaggac cgtccgagtg gtagcttcca aacagggctc cactgttacc ctgggggatt
      481 tctaccgggg cagagagatc accatagttc acgatgcaga tcttcagatt ggaaagctca
      541 tgtggggaga cagtgggctc tattactgta tcatcaccac cccggatgac ctggaaggca
      601 aaaatgagga gtcggtggaa ctgctggtgt tgggcaggac agggctgctt gctgacctct
      661 tgcccagttt tgctgtggag attatgccag agtgggtgtt tgtcggcctg gtaatcctgg
      721 ggatcttcct gttcttcgtg ctggtgggga tctgctggtg ccagtgctgc cctcacagtt
      781 gctgctgcta cgtccgctgc ccatgctgcc cagattcctg ctgctgccct caggccttgt
      841 atgaagcagg gaaagcagcc aaggccgggt accctccctc tgtctccggt gtccctggcc
      901 cctactccat tccctctgtc cctttgggag gagccccctc ttctggcatg ctgacggaca
      961 agcctcatcc acctcccttg gcaccaagtg attccactgg aggaagccac agtgttcgca
     1021 aaggttaccg gatccaagct gacaaagaga gagactccat gaaggtcctg tactatgtcg
     1081 agaaggagct ggctcagttt gatccagcca ggaggatgag agggagatat aacaacacca
     1141 tctcagaact cagctccctg catgacgatg acagcaattt ccgccagtct taccaccaga
     1201 tgcggaataa gcagttcccc atgtctgggg acgtggagag caatcctgac tattggtcag
     1261 gtgtcatggg aggcaacagt gggaccaaca gagggccagc cctggagtat aacaaagagg
     1321 accgtgagag cttcaggcac agccagccgc gctccaaatc cgagatgctg tcgcggaaga
     1381 actttgccac tggcgtgccg gccgtgtcta tggacgagct ggcggccttt gcagactcct
     1441 atggccagcg gtcgcggcgt gccaacggca acagccacga ggcccgagcg gggagccgct
     1501 tcgagcgctc ggagtcgcgg gcccacggtg ccttctacca ggacggctcg ctagacgagt
     1561 actacggacg cgggcgcagt cgcgagccgc caggagacgg ggagcgtggc tggacctaca
     1621 gccccgctcc cgcacgccgc cggccgccgg acgatgcggc tctgccgcgc ctggtgagcc
     1681 ggaccccggg caccgcgccc aagtacgatc actcgtacct gagcagcgtg ctggagcgcc
     1741 aggcgcggcc tgagagcaac agccgcgggg gcagcctgga gacgccatcc aagctgggcg
     1801 cacagcttgg cccgcgcagc gcatcctact acgcctggtc gccgccagcc acctacaagg
     1861 ctggggccag tgagggcgaa gacgaggacg acgctgccga cgaggacgcg ctaccaccct
     1921 acagcgaact ggagctgagc cgcggggaac tgagccgggg cccgtcctac cgcgggcgtg
     1981 acctgtcctt ccacagcaac tcggagaaga ggaggaaaaa ggagcccgcc aagaaaactg
     2041 gcgactttcc aaccaggatg tcccttgtag tctgatacct ttaagacacc tctctggatt
     2101 actggaaatc agatgcagac aatggagaca agacacaaat ctgaaagccg gcaagcctag
     2161 aaccttttct ggccagcaac catcttggaa gctttgcgga tctctgattt gccaagggac
     2221 tcccctttaa ggaggctgat ttcaaatctt agtgcccatc tgtcttgaac aactttcaag
     2281 aaaacgatgt gagagaacgt atcacctaat aacacaccac gtttgtcttg ccccaccccc
     2341 acttcctgag cagaaacaag actctgtcca gttctgaagc aggtagcttt ggacccctgg
     2401 tctctagaaa ttacccatgc ctgcagtatg tttttctatg agtgctattc tgtgcttaga
     2461 gacagaggaa tttattatta ctgttagaag accttctgct cacaagagag ataacgtcaa
     2521 ggtaaaatgt accttggatc cccatcgctt ccagtcactg gtcaatgagt cttgttatgc
     2581 taaaatcaga aggcctttag tgagcttagc ggcagtgacc tcccgggcaa tcacagaaat
     2641 ggcttcaatt tgctgctctg actcacaact ctaagtggct gggaccggca gaggatagca
     2701 ttttgaaaca ctgtcttaag tggtcttttt ttttccatcc ggaggacaca aactgctttt
     2761 catctttttg ttgcacagtg acacgcgagc cttgaactcc taaggctccc cgctccctgg
     2821 tctctctcct ccttccctct cctggtcttt tcagggctgg tgcctctgag agtgtttcac
     2881 tccacacttc agtatgaata gcttgacatc aggtgccttt gacaggtgtt tgaaacacac
     2941 atttgagaga ggaggaaagc agacgtcggt gatgcaagat gaagaagggg aaaggacctg
     3001 agagggaaag gacgtgtagt ctcattttct ttcagatgtg ggctgttttc ccacaaacac
     3061 actcagattt tttttttttt ttggatttgt acttcattta acagttattt ctaccatctt
     3121 gtttctgctg ctgctggata ccagggatgt ggtgtccaca tcttttggcc tcattggcct
     3181 gccactatag tgctttgggg aagagaaaga taccacttcc tcagcaagaa gcacttcctc
     3241 ttcctaccct tgccgaaagg aaaaaaaaat ggttttgcct gaatcccaaa ttggactttt
     3301 gtaggtaaac tgagaaaatg gccacaaatg cttcccctct cattttcctg tgaaggggtt
     3361 tgtcctctca ctaccacaga ccctaccaaa tgcacctaaa ctctcctaca tggtgagaga
     3421 caagcctggt caccacggcc attatctggg cccatcttaa cagacatggg agaaaatcta
     3481 gccacgacca acaaaagaac tgcctagctg agccgagccc aaactgggga ttcctacttg
     3541 agaggagacg tttggtatcc ccacgtgttc atttatcaag gatgaacctc tcatcagaat
     3601 atttggctct gattggtcac tcacccaacc ttgggtgtca cacaaccttc gattttgtta
     3661 acagacgttt caatctgcgt catggtggtg agactcgtga ctgggtgaag tatctggagc
     3721 aaggtgatgc ttgcttccct aatccagtgg tggtcaattc tctacttatt gatctatgtg
     3781 tagcctctga agaaggttgg tcagcatttc ctctgacttt ttccccggcc acctgactgg
     3841 aattccagag tccattctgt tagcatccat tgtacttcat gagatttttt ttcagaaaaa
     3901 gtcctctatg tgtgatgtaa ggagctgctg ggcgagggtt ggaggggtag aatcattgcc
     3961 tggaggagaa ctggcctgcc aaaggacttc atggttgctt tggcttgccc tagatggatc
     4021 aggaggatac ttcagcccaa tgctggcact tccaagggct ggaagacaaa agccataact
     4081 ctggtgctga gttttagact tagtttagct agtgtccctg gcttcagaaa acctaggtct
     4141 gatccatctg tttgggctct aaatccacat ggcaaagaca tcattcctta atcaccagcc
     4201 tttgatttca acttgctcag gcactcttga agaatgttgg atagccgcag tagctattgt
     4261 tatactgagc actgtgtcag gcttcttacc accaaagagc cccgtcgcac aggccacaga
     4321 gaccaaatac attgctttgt agagccaggg gcaagtatga gcttagtgaa agctgagggg
     4381 agcaataaat ttaaaaaaaa agttaaaatt ggaaacacaa gttctaaaga caacaagtct
     4441 ataggctggc attttttttt aagttcaatg tatagaagat aacaggcttt caaaataact
     4501 gggggaaagt ggaacacaga ttgttctttg tagggctgca tgaatcgcat gggcttccag
     4561 acctccagta gagaggagga gcagtgggtt ctgggtacgt gggtaggaga agatgctaaa
     4621 cagacaaggc taagctggat gctctccgtg ccctcgacgt ttctttacac acccctttgt
     4681 ttcttctcca aatactgtgt cccgcacagg aagtgcctat acgtattatt tcctttcctg
     4741 ttttcctagg gcataaagaa aagtctcata taagaggtga tctccatcca ctgattccct
     4801 acaatttaag aaggaagata agtcatgccc aagaaagaat gagtatattt tatgcatatg
     4861 aaaagaaata gtgctatgga taaattataa taaactcaga gatttaaaat tttttaaaaa
     4921 aaacttaaat gggaatattt tgatatttaa ctgttgtgtg tttgtccatc catcccagtt
     4981 ttaggacatg ctcagcgatc tgcaaaggca ggctgtagaa gtctgagctg agaagtggtg
     5041 aggggaacag agagagatga gtggcagggg tggggagggg gcagaggcct gcttcaggag
     5101 cttctgtctc tgcctgtgac tcacagctga gtcagggaca agctggagag ggagcgtgga
     5161 agcgggtggc gggaggggtc ccctggtgct cagagctctt ctctaggacg tgtatagact
     5221 cattaggaga ctcagacagt gttcagttct ttcatccaag caagcccagg ggagctcagg
     5281 atggagtcct ccaggcactt gtatctacag cttggggtgc agcagcacct cacatgggta
     5341 gggaacccca tctcttctca cgatcctcac tctgcacacg gtgtaggcct gtgtgagggt
     5401 gaggggaggc tggcgctaca tatcaaaatc tggttagatc caaggcagcc tttgagagga
     5461 gtggagtagc agatactgca ttggttcatc cactctccat ccctttaaaa atagatggag
     5521 aaaccattat ccctgtttgc agagtcccaa acctgtcaga tctttacatt ccccgtctat
     5581 aggcttttcc tgttggatct gtgttttaca aaactgcctg gccataggaa ctatttgctt
     5641 agggcctgga gaaagatggc tcagcagtca gaaacactta actgctttag caggggacct
     5701 gagtttggtt tccggtaacc tcacaatgct cacagctgtc gctaactcca atcccaggga
     5761 cccactgatc ttgtagagca tctgggagca cgaatctcac atgtatatgc cataaaaacc
     5821 actcagacac acaaaataaa aataaatatg ttgttaaaac ccgaaactga aaggatctag
     5881 agagatgact ctgtgattgc aggtgctggc tactgtacct gagaagccac actcattttc
     5941 cagcacatgg agcctccccg ctccagttgt aggggatctg ataccctctt ctggcctctg
     6001 caggtactgc acacatgtgg acagacacgc aggaaggcaa aatacacaca taaaaaagga
     6061 aaaaacattt gaaaaaacac ttggtaaaat aatcgcatgt gggactgggg atgccactca
     6121 gttggtagag cgcttgattc gagtgcacaa agccctggtt caatccccag cactataaac
     6181 caggggccgt ggcacgtgca cgtcatccca acatttggga ggtaaaggca ggagagttag
     6241 aagtgcaagg ttacttttgg ctgcatagtg agttcaaggc cagcctgggc tgtatgatta
     6301 ttttaagaac caaacagtaa aaacaatttt taaaaaacac aaggattact gtctgcctgt
     6361 caaagatgct gttgagctgt gccttggaga atgggtgggt ggatctggag taaagatttg
     6421 tactctgaac atatgcagag agccttgtgg tagatgtgtt tgggtggtgt tacactggat
     6481 cgtacctctg gtgcacccct atctgctggc caggagtatt gttcgtgtct gtattggtca
     6541 ggattatttt attccaatgt catggtgagg tccctctaac tcccttgggg ctggcactgg
     6601 tgcagcacca gctatgacac tggagactgg ctcatcagag tccagcagaa aggagacatt
     6661 taaagggaga gggttggaag ccctccccca ggagactcct tgagatgttc caactcccag
     6721 aatagtgatg tgttgtgaca ggctgagatc agacaacagg aattacaggt aattttctta
     6781 ttcccttgcc atcccgaata aaacttagct cgtgaataga aagaaagcca ttggggaaaa
     6841 tggcaaacgt aaatcatttc taaagggtac aaatgaacgg ctttgctaat agcataactt
     6901 ttatgttagg agcaatagtg ggtggaggaa aaatagtaaa atatacccct tccaaaattg
     6961 atttagttgt ggccagaatc ttatgggaat ttagaagtga tgtatacagg gtaaggatta
     7021 tccctggaga ttctaaggtc taagaagcaa aatggtgcct agcattccct gccaggaccc
     7081 tacctcctcg gcacttgggg caaccagtga agctcaaagg cgagtaagag gctaagttgc
     7141 ttgaagcctg aggttggcag tgatggggca tatttgttct ttgcagcaac ccgtgtgttt
     7201 tcccacctta cacaatgtgg agctgaggtt aaatatgcca agtgaccact tattgccaaa
     7261 tagcgtttag tctttaaatg gccttctgac tgtctagggt tcttcccaat tcctgcagtc
     7321 atcacaggcc cagaccgcca cttattctct tcacaaccag gtggagagtg gggagagccc
     7381 cgagtcgata ttcactcaca ggtcatcatc gaggagaagc tacgaagatg ggtattggcc
     7441 acttcatcta tccacgtaaa actggggatc cagatctaga gggggataaa gaagacaaga
     7501 aggataaagt tgtggcagtt gagctaaaaa gccatgtttg agttttctgt ggggctgagt
     7561 ggacaggagt aaatgtggtc tgactccttc tatctagaag gttgggagac acccatagct
     7621 tctctcttgc catgtttatt aataaagatg ttagacactt ctccgtgaga tatttccttg
     7681 tgaaagtaaa gaccacaaca tcaaaacatt gggttgcaaa gttgcctact tcacgagagt
     7741 cacctgcccc gtcgtttttg tgccttgtct gtgacgtcaa aacgcaaatg tttatatcac
     7801 tgtcactcat gattattttc ctatgtcgga caaacaaagt gcatttggtt gtaatgtttt
     7861 aaagtaaata aagcatttca tctaa
//
