LOCUS       XM_039101198            1191 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interleukin 27 (Il27), transcript
            variant X1, mRNA.
ACCESSION   XM_039101198
VERSION     XM_039101198.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1191
                     /gene="Il27"
                     /note="interleukin 27; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 32 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:365368"
                     /db_xref="RGD:1561420"
     CDS             139..927
                     /gene="Il27"
                     /codon_start=1
                     /product="interleukin-27 subunit alpha isoform X1"
                     /protein_id="XP_038957126.1"
                     /db_xref="GeneID:365368"
                     /db_xref="RGD:1561420"
                     /translation="MGQVTGGLGWRLSLLLLPLLMVQTGSWGFPADPLSLQELRREFT
                     VSLYLARKLLSEVQGYVHSFVSLLSVIGSGGEDTPKSHWPSLTELTLQAESRLPGVNL
                     DLLPVGHHLPNVSLTFQAWRHLSDSDRLCFLATTLRPFPALLGGLETQRTWTSSEREQ
                     LWAMRLDLRDLHRHLRFQVLAVGFSCSEEEKEEEEEDEEEEEGKELLLGALGGPNQVS
                     SQVSWPQLLYAYQLLHSLELVLSRAVRDLLLLSLPRRPDSACDP"
ORIGIN      
        1 tccccatttt taaccaggga agacttagtg agcacaaagc tgaaagtaca agcaggacag
       61 aaagtgaaac tgggcacagc ccccagtata agagccccct acccaggaga tggctgcaca
      121 cagaggctgg gccctgacat gggccaggtg acaggaggcc ttggctggcg gctcagcctg
      181 ttgctgctac ctttgcttat ggtacaaact ggttcctggg ggttcccagc agaccccctg
      241 agccttcaag agctgcgcag ggaattcaca gtcagcctgt accttgccag gaaactgctc
      301 tctgaggttc agggctatgt ccacagtttt gtgagtctcc ttagtgtaat tgggtctgga
      361 ggtgaggaca cccccaagtc ccactggccc tcactaacag aacttaccct tcaggctgaa
      421 tctcgcttgc caggagtgaa cctggacctc ctgcccgtgg gacaccatct ccccaatgtt
      481 tccctgacct tccaggcatg gcgtcacctc tctgactctg acagactctg cttcctcgct
      541 accacacttc gacccttccc tgctctgctg ggagggctgg agacccagag gacctggacc
      601 agctcagaga gggagcagct gtgggcaatg aggctggatc tccgggacct gcacaggcac
      661 ctccgcttcc aggtgctggc tgtaggattc agctgttcag aggaggaaaa ggaagaggaa
      721 gaagaggacg aggaggagga ggaagggaag gagctgctcc taggggctct gggtggcccc
      781 aaccaggtgt catcccaagt gtcctggccc cagctgctct atgcttacca gctcctacat
      841 tccctggagc ttgtcctatc tcgggctgtt cgggacctgc tgctgttgtc cttgcccagg
      901 cgtccagact cagcttgtga tccctaacac ctagcttcag gccctatgtg acttcggctg
      961 ccttccctca cccactaaga ctctaaggct ggagtctgcc caaccatgct ggacagtctc
     1021 tagctcattt gcgttagacc aggcggggct tcactagttc ccagccctga cccaatcatt
     1081 accagatatt tatttcttgg atatttattt atttttagga aatggtttat ttattgtttc
     1141 gtccttgagt tgggccacca tgctgggagc ctaataaagc tgtccagccc a
//
