LOCUS       XM_039108697            2038 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interleukin 23 receptor (Il23r), mRNA.
ACCESSION   XM_039108697
VERSION     XM_039108697.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108697.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2038
                     /gene="Il23r"
                     /note="interleukin 23 receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:689932"
                     /db_xref="RGD:1586368"
     CDS             18..1892
                     /gene="Il23r"
                     /codon_start=1
                     /product="interleukin-23 receptor"
                     /protein_id="XP_038964625.1"
                     /db_xref="GeneID:689932"
                     /db_xref="RGD:1586368"
                     /translation="MSHVALQLHVVIALYALFRWGHGGIATINCSGNMWVEPGEIFQM
                     GMNVSVYCQEALKNCRPRNLHFYKNGFKERFHITRINRTTARVWYKGFSEPHASMYCT
                     AECPGRFQETLICGKDISSGYPPDAPSNMTCVIYEYSGNMTCTWNTGKPTYIDTKYTV
                     HVKSLETEEQQQYLASNYVNISTDSLQGGRKYLVWVQAVNALGMENSQQLQVHLDDIV
                     IPSPSIISRAETTNANVPKTIIYWKSKIMTGKVFCEMRYKATTNQTWNVKEFDTNYTY
                     VQQSEFYLEPNSKYVFQVRCQGTGKRNWQPWSSPFVHQTPQTASQVTSKPPHEPQKIE
                     MLTATIFKGHSTSDNSQDIGLLSGMVFLAILLPIFSLIGIFNRSLRIGIKRKVLLMIP
                     KWLYEDIPNMENSNIAKLLQEKSVFENENASEQALYVDPILTEISEISPLEHKPTDYK
                     KDRLTGFLETRDCPLTTLSTSSSVVYIPDLNTGYKPQVSNVPPEENHFINRDERDPMS
                     LEATGDHFARLKTYPNFTFSASSMTSLSKTLILDELSLVLNQGEFNSLDIQNSRQEET
                     SMILQNDSPSETIPVQTLLPDEFVSCLAIGSEDLPSINSYFPQNVLESHFSGIPLLQK
                     "
ORIGIN      
        1 tctactacat ttgggacatg agtcacgtcg cacttcagtt gcacgtggta atagcccttt
       61 atgcgctctt cagatggggt catggaggaa ttgcaactat aaactgctct ggtaatatgt
      121 gggttgagcc tggtgaaatt tttcagatgg gtatgaatgt ttctgtatat tgccaagaag
      181 ctcttaagaa ctgccgacca aggaatcttc acttttataa aaatggcttc aaagaaagat
      241 ttcatatcac aaggattaat agaacaacag ctcgagtttg gtataaaggc ttttcggaac
      301 ctcatgcctc tatgtattgc actgctgaat gtcctgggcg ttttcaagag acactcattt
      361 gtgggaaaga catttcctct ggatatccac cagatgcccc cagcaatatg acatgtgtca
      421 tttatgaata ctcaggcaac atgacttgca cctggaacac tgggaagccc acctacatag
      481 ataccaagta tactgtgcac gtgaagagtt tggagacaga agaacaacaa caatatcttg
      541 cctcaaacta tgttaacatc tccactgact cattgcaagg tggcagaaag tatctggtat
      601 gggtccaagc tgtcaatgcc ctaggcatgg agaactcaca acaactacaa gttcatctgg
      661 atgatatagt gataccttct ccatccatca tttccagggc tgagactaca aatgctaatg
      721 tgcccaagac cataatttac tggaagagca aaattatgac tgggaaagta ttctgtgaga
      781 tgagatacaa agcaacaaca aaccaaacat ggaatgttaa agaatttgac accaattaca
      841 catatgtgca gcagtcagaa ttctacctgg agccaaacag caagtatgta tttcaagtga
      901 gatgtcaagg aactggtaaa agaaactggc agccttggag ctcgcccttt gtccaccaaa
      961 ctccccagac agcttcccag gttacatcaa aaccacccca cgaacctcag aagattgaga
     1021 tgctcactgc tacaatcttc aaaggacatt ctacttcaga taatagtcaa gacattggac
     1081 ttttgtcggg aatggtcttc ttggccatct tgttgccgat tttttctctg attgggatat
     1141 ttaacagatc acttcgaata ggaattaaaa gaaaagtctt actgatgatc ccaaagtggc
     1201 tttatgaaga tattcccaat atggaaaata gtaatattgc aaaattatta caggaaaaaa
     1261 gtgtatttga aaacgaaaat gccagcgagc aggccctgta tgtggatcct atccttacag
     1321 agataagtga aatctctccc ctggaacaca aacccacaga ttacaaaaaa gacaggctca
     1381 caggattcct tgagacaaga gactgtccac taacaacatt gtctaccagt tcttctgttg
     1441 tgtatattcc tgatctcaac actggataca aaccccaggt ttcaaatgta ccccctgagg
     1501 aaaaccattt cattaataga gatgaaagag accctatgtc ccttgaggcc acaggtgacc
     1561 actttgccag attgaaaaca tatcccaact tcacattttc tgcttcaagt atgacttcac
     1621 taagcaaaac actaattctt gatgaattga gcctcgtttt aaatcaagga gaattcaatt
     1681 ctcttgacat acaaaactca agacaggagg aaaccagcat gattttgcaa aatgactcac
     1741 ccagtgaaac tatcccagtg cagactctgc tgcctgatga atttgtctcc tgtttggcaa
     1801 tcgggagtga agacttgccg tctattaact cttactttcc acagaacgtt ttggaaagcc
     1861 atttcagtgg gattccactc ttgcaaaagt agactatgcc atcaaagtca atgtgagaag
     1921 ctgcctttca actgcaagcc aatgcttcgc tcaaaaaaag tgtaaaaaag tgtaattaca
     1981 ctgccgtgac tccaggaagg agctcctctc actggcaaaa caaaataaaa caaaaaca
//
