LOCUS       NM_001191869            2118 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus interleukin 22 receptor subunit alpha 1
            (Il22ra1), mRNA.
ACCESSION   NM_001191869 XM_342947
VERSION     NM_001191869.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Shui,J.W., Larange,A., Kim,G., Vela,J.L., Zahner,S., Cheroutre,H.
            and Kronenberg,M.
  TITLE     HVEM signalling at mucosal barriers provides host defence against
            pathogenic bacteria
  JOURNAL   Nature 488 (7410), 222-225 (2012)
   PUBMED   22801499
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Bertossi,A., Aichinger,M., Sansonetti,P., Lech,M., Neff,F., Pal,M.,
            Wunderlich,F.T., Anders,H.J., Klein,L. and Schmidt-Supprian,M.
  TITLE     Loss of Roquin induces early death and immune deregulation but not
            autoimmunity
  JOURNAL   J Exp Med 208 (9), 1749-1756 (2011)
   PUBMED   21844204
REFERENCE   3  (bases 1 to 2118)
  AUTHORS   Endam,L.M., Bosse,Y., Filali-Mouhim,A., Cormier,C., Boisvert,P.,
            Boulet,L.P., Hudson,T.J. and Desrosiers,M.
  TITLE     Polymorphisms in the interleukin-22 receptor alpha-1 gene are
            associated with severe chronic rhinosinusitis
  JOURNAL   Otolaryngol Head Neck Surg 140 (5), 741-747 (2009)
   PUBMED   19393422
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jul 17, 2010 this sequence version replaced XM_342947.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.30845.1,
                                           SRR26643288.24313.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                JAXUCZ010000005.1  153245067-153245109
            44-176              JAXUCZ010000005.1  153249712-153249844
            177-355             JAXUCZ010000005.1  153250644-153250822
            356-531             JAXUCZ010000005.1  153254170-153254345
            532-670             JAXUCZ010000005.1  153262009-153262147
            671-792             JAXUCZ010000005.1  153266041-153266162
            793-2118            JAXUCZ010000005.1  153268540-153269865
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2118
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /note="interleukin 22 receptor subunit alpha 1"
                     /db_xref="GeneID:362629"
                     /db_xref="RGD:1559655"
     CDS             1..1734
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /note="interleukin 22 receptor, alpha 1"
                     /codon_start=1
                     /product="interleukin-22 receptor subunit alpha-1
                     precursor"
                     /protein_id="NP_001178798.1"
                     /db_xref="GeneID:362629"
                     /db_xref="RGD:1559655"
                     /translation="MKTLLTILTVGSLAAHTTEDTSGLLRHVKFQSSNFENILTWDAG
                     PASAPDTVYSVEYKKYGEKEWLAKAGCQRITQKFCNLTVETRNHTEFYYAKVTAVSSG
                     GPPVTKMTDRFSSLQHTTIRPPDVTCIPKVRSIQMLVHPTLTPVLSEDGHQLTLEEIF
                     HDLFYRLKLHVNHTYQMNLEGKQREYEFLGLTPDTEFLGSITILTPILSKESAPYTCR
                     VKTLPDRTWAYSFSGAVLFSMGFLVGLLCYLGYRYITKPPVPPNSLNVQRVLSFQPLR
                     FIQEHVLIPVLDLSGPSSLPQPIQYSQVVVSGPREPPGAGRRRHSLSDLTYVGQSDGS
                     ILQPTNGPAQQTLSPPSYAPKALPEVQPLSYAPQVASDAKALLYSPQQGIKTGPATYD
                     PQDVLDSWPASYAVCVEDSGKDSTPGILSSPKHLKLQEDTLVRSCLPGDLSLQEVTSL
                     GEEEAQRPKSLPPPLGFCTNGPDLHTLHSEEPETPRYLKGGLSLLSSVQIEGHPVSLP
                     LHLHSVSCSPSDQGPSPWGLLDSLVCPKDEGPVAETEAILPSAVASELEQSTELDSLF
                     KGLALTVQWES"
     exon            1..43
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            44..176
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            177..355
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            356..531
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            532..670
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            671..792
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
     exon            793..2118
                     /gene="Il22ra1"
                     /gene_synonym="RGD1559655"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagacac tactgaccat cctgactgtg ggatccctgg ctgctcacac cactgaggac
       61 acatctggtc tccttcgaca cgtgaaattc cagtccagca actttgaaaa catcttgacg
      121 tgggatgctg ggccagctag cgcccctgac acggtctaca gtgtggaata taagaagtac
      181 ggagagaaag agtggctggc caaggctggc tgccagcgga tcacccagaa gttctgcaac
      241 ctgactgtgg agacccgaaa ccataccgaa ttttactacg ccaaggtcac ggcagtcagc
      301 tcgggaggcc caccggtcac taagatgact gatcgcttca gctcgctgca gcacactacc
      361 atcagaccac ccgatgtgac ctgtatcccc aaagtgaggt ccattcagat gctggtccac
      421 cccacgctca cacccgtcct ctcggaagat ggccaccagc taaccctgga ggagattttc
      481 catgacctgt tctaccgctt aaaactgcac gtcaaccaca cctaccaaat gaaccttgaa
      541 ggcaaacaga gagagtatga gttccttggc ctgacgcccg acacagagtt cctcggctcc
      601 atcacaattt tgactccaat actgtccaag gagagcgccc cctacacgtg ccgagtgaag
      661 acgctgcccg atcggacgtg ggcctactcc ttctcgggtg cagtgctgtt ctccatgggt
      721 tttctcgtcg gcttgctctg ttatctgggc tacagataca ttaccaagcc acctgtacct
      781 cctaactccc tgaatgtcca gcgtgtcctg agctttcagc ccctacgttt catccaggaa
      841 cacgtgctga tccctgtctt ggacctcagt ggccccagca gtctacctca gcccatccag
      901 tactcccaag tggtggtgtc tgggcccagg gagccacctg gagctgggcg gcggcggcac
      961 agcctgtctg acctcaccta tgtagggcag tcagacggct ccatcctcca gcctaccaat
     1021 gggccagctc agcagacact gtccccacca tcctacgctc caaaggctct ccctgaggtg
     1081 cagccccttt cctatgcacc tcaggtagcc tcagatgcca aagctctgct ctactcacca
     1141 caacagggga taaagactgg gcctgccacc tacgacccgc aagacgttct ggacagctgg
     1201 cctgcttcct atgctgtgtg tgtggaagac tctggcaaag actccacccc ggggatcctc
     1261 tccagtccca aacacctcaa gctccaggaa gacacacttg ttagaagctg tctcccaggg
     1321 gacctttctc tgcaggaagt cacctccttg ggtgaggagg aggcacagag accaaaatca
     1381 cttcctccac ctctggggtt ctgcacaaac ggacctgacc ttcacacatt gcacagtgag
     1441 gaaccagaga cacctcggta cctgaagggg gggctgtccc tcctgtcctc tgtgcagatc
     1501 gagggccacc ctgtctccct ccctttgcac ctccattctg tctcatgttc cccctcagac
     1561 cagggaccaa gcccctgggg cctgctggac tcccttgtgt gtccaaagga tgagggtcca
     1621 gtggctgaga ctgaggccat actccccagt gctgtggcct ctgagctgga gcagtccaca
     1681 gaactggact cacttttcaa aggcttggcc ctaactgtgc aatgggaatc ctgaagggaa
     1741 atcggagcga gcaggcctag gcttcctcct gccccaccca gctaacgacc cctcacccag
     1801 taagccacag gttctaaggc ccagccccac atgggttccc tagagagaat gagagggaga
     1861 tttgggcccc atgtgggaat ccagatgtat ggtgaagact ctagtggaga agtaacaggc
     1921 agggggcatg tgcaaatggc ctgtggcaca gagcccagca gacaggacag agtgaggtaa
     1981 tgcagggaaa tctggagagc catccaagct ccctaatcta gtttaaccaa gagtgaggtg
     2041 tccaccatct ccgaaggatc ttggactgga aggtgggggg ccaagcatac taggcacttt
     2101 ggccgagcag cagcaaga
//
