LOCUS       XM_017596794            5207 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interleukin 18 receptor accessory
            protein (Il18rap), transcript variant X1, mRNA.
ACCESSION   XM_017596794
VERSION     XM_017596794.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 16, 2024 this sequence was replaced by
            NM_184047.2.
            
            On Jan 21, 2021 this sequence version replaced XM_017596794.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5207
                     /gene="Il18rap"
                     /note="interleukin 18 receptor accessory protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 1 EST, 4 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 22 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:373540"
                     /db_xref="RGD:727867"
     CDS             621..2504
                     /gene="Il18rap"
                     /codon_start=1
                     /product="interleukin-18 receptor accessory protein
                     isoform X1"
                     /protein_id="XP_017452283.1"
                     /db_xref="GeneID:373540"
                     /db_xref="RGD:727867"
                     /translation="MLCLGWVFLWFVAGEKTTGFNHSACTTKKLLWTYSARGAENFVL
                     FCDLQELQKQDFSHRSQSSSTLGPAHQPCSGSEKDLSDVQWYMQPRSGGPLEEINRNS
                     PHMQNKGTLRILAPQMNSIWSYICRPRSRRPQDTACCVKTVLEVKPQRNISCGSSAQD
                     EQVLLLGSTGSIHCPSLSCQSDVRSPEMTWYKDGRLLPEYKKNPIEMEDIYDFHQGLY
                     VCDYTQSDNVSSWTVRAVVQVRTIDEDTNVKPDILDPVTDTLDVELGKAFTLPCRVQF
                     GFQRYSKPVIKWYVKESTQEWEISEFVEKRIQSTLKNEVIEHTVFLREVTQRDLSRKF
                     VCFAQNSIGNTTRTIRLRKKEGVVFLYILLGMTVMLVGVLVAAALLYWHWIEVVLLCR
                     TFKNKDETLRDKKEFDAFVSYANWSSPETEATGSLSEEHLALNLFPEVLENTYGYSLC
                     LFERDVTPGGVYTDDIVSIIKRSRRGIFILSPRYINGPRVFELQAAVNLALVDQTLKL
                     ILIKFCSFQEPESLPYLVKKALRVLPTVTWKGLKSVHATSRFWTQIRYHMPVKNSNRF
                     MFNWLRLIPKGFSPEKDLATQKPLGGMPNSGNSHGAQNRTPDAGNRHGAQNLLLSGHQ
                     KRC"
ORIGIN      
        1 aaccgcaacc cttttcttgt caaggaggct ggccagagga cagctttgaa tactttattt
       61 cagggttttt cttccgcgga taaagggagt ttatttcatt tttcctttgt tatgaccagg
      121 cgctttccaa tgccagcggt cctctacaaa ataccaaggt tgtccttttc tgtccagtgt
      181 aactcattat ttcctaactg tatgagttgg acagtcctta cctcttctcc aagtaactct
      241 ttctaagaga aaaaaagtat gtagtagaac cctttgaaaa tgggtgtttt tcacaccttt
      301 ttttttccca gatgcacaag ctggcattca ctgacataaa gacttgaagt tctttatttt
      361 ttgtgtatgt aagagcagga aacaaaggaa agagaccttg cagatcttca gatcctccca
      421 ttggcctctt acgtccttct gtggagggga gtgtatagtg gtggcaagat gagaaacttc
      481 gaaaccttct tcatccagtt atgattctct cttcctcttc tgaaagtgaa gaagatgcca
      541 gaggaagagg tttgcctctc tacacactct acactggcga cgagagttca ctgaagccat
      601 gacaggagca aaggagaaac atgctctgtt tgggctgggt gtttctttgg tttgttgcag
      661 gagagaagac cacaggattt aaccattcag cttgcaccac caaaaaactt ctgtggacat
      721 attctgcgag gggggccgag aactttgtcc tattttgtga cttacaagag cttcagaagc
      781 aagatttctc ccacagaagt caatcatcat caacactagg tcctgctcac caaccttgca
      841 gtggcagtga gaaggacctc tctgacgtcc agtggtacat gcaacctcgg agtggcggtc
      901 cactagagga gatcaataga aactctcctc atatgcagaa caaaggcacg ctgcgtatat
      961 tggccccaca gatgaacagc atttggtcat atatttgtag acccagaagt aggaggcccc
     1021 aggatacagc ttgttgtgtg aagactgtct tggaagttaa gcctcagaga aatatatcct
     1081 gtgggagctc agcacaagat gagcaagtcc tactacttgg cagcactggc tccattcact
     1141 gtcccagcct cagctgccaa agtgatgtac ggagtccaga gatgacctgg tacaaggatg
     1201 gaagactgct gcccgagtat aagaaaaatc caattgagat ggaggatatt tatgattttc
     1261 accaaggctt gtacgtgtgc gattacactc agtcagataa tgtgagttcc tggaccgtcc
     1321 gagctgtggt tcaagtgaga accatcgatg aggacaccaa tgtgaagccg gacattctgg
     1381 atcccgttac agacactctg gacgtggagc ttggaaaggc ttttactcta ccctgcagag
     1441 tacagtttgg cttccaaaga tattcaaagc ctgtaataaa gtggtatgtc aaagaatcta
     1501 cacaggagtg ggaaatttca gaatttgtgg agaaaaggat tcaatccact ttgaagaacg
     1561 aagtcattga acatactgtc ttcttgagag aagtcaccca aagagatctc agcagaaagt
     1621 ttgtttgctt tgctcagaac tccattggga acacaacacg gaccatccgt ctgaggaaga
     1681 aggaaggagt ggtgtttcta tacatcctcc tcggcatgac tgtgatgctg gtgggtgtac
     1741 tggtggcagc tgctttgctc tactggcact ggattgaagt tgtcctgctg tgccgaacct
     1801 tcaagaacaa agatgagact ctgagggata agaaggaatt tgatgcattt gtatcctatg
     1861 caaattggag ctctcctgag actgaagcca caggatctct gagtgaggaa cacttggctc
     1921 taaatctttt cccggaagtg ctagagaaca catatggata cagcttgtgt ttgtttgaaa
     1981 gagacgtgac cccaggggga gtatatactg acgacattgt gagcatcatt aagagaagcc
     2041 gaagaggaat atttatcctg agtcccagat acatcaatgg accccgtgtc tttgaactac
     2101 aagcagcagt gaaccttgcc ttggttgatc agacactgaa gttgatttta attaagttct
     2161 gttccttcca agagccagaa tctcttcctt accttgtcaa aaaggccctg cgggttctcc
     2221 ccacagtcac gtggaaaggc ttgaagtcgg ttcacgccac ttctaggttc tggacccaaa
     2281 tacgttacca catgcccgtg aagaactcca acagatttat gttcaactgg ctcagactta
     2341 tcccgaaggg cttttcccct gagaaggacc tagcaacgca gaaacccttg ggaggaatgc
     2401 ccaactcggg aaacagccat ggagctcaga acagaacgcc cgatgcaggg aacagacacg
     2461 gagctcagaa cctccttctc tccggccacc agaagaggtg ctgatgggca gaacttgctg
     2521 agaggatcag gctgacagaa aattgaacct ttctgctctc agtgcccagc gagcttgaca
     2581 ggcagtggaa tgaagcaaca tctgtggttt tagggtctga gttcctggaa aggacacgga
     2641 cacacacaca cacacacaca cacacacaca cacacacaca cacacacaga gagagagaga
     2701 gagagagaga gagagagaga gaatatgctc cagacctctg ccttgcactc agcacacatt
     2761 tccctgagag tttccaagag tttctgttga gcagaatcaa cagaaatagc tccgtgggct
     2821 gtctaacatg cctgcatgcc tgttttgcac tatatgcatg aatttatcat atgtttgcat
     2881 gtatatgcag tcagataaat aggattttat tttgttggat accagtgatt ggaactccat
     2941 ctaaagccct ttggtaaaga aatttcgctg tttgtttatt ccactctaca gaggagaaac
     3001 gtagaaggtg agacagagca cagaataggt atgatctcct gggtcccgat gggacatgac
     3061 cactttgaag gcatgaacta ggtatgtgtt cctagaccca ttgatgacta atgtgcatgg
     3121 ggtcctttgt tggcagaaca tgttgtgact cacaaatgct tttagtgagc tcatctgagt
     3181 ctgagcttag aaaggtgcac tgtagaatgg tggacattcc ccttgggact aagtgagagt
     3241 tgtgcttctt tcctgctcag tactgtaagt gaaagtcaca tcccaagtca ctatcaccag
     3301 aaaaattaca tgctcaacac tcagagtgtc aaaattttga gtccaagttc ttctaaatcg
     3361 tgtataacag agaggacaga acccttctct tggttggtag tctccacagg attaggttta
     3421 ggaacgggat agagctaatt acaatctctc cttgttttct tggctagaga cctttgggca
     3481 gaaatcaaat cttacccgag tctctgcaag tagagactaa tttgtcccag atcattagtt
     3541 caattaagag acaaggaatg gattcgcagc tatctacaac ccggagagtc tgagccataa
     3601 gtgtacacat gggttgacaa gcaacaagag tacagcagaa gccatacctc tcagagccat
     3661 ttactggctg agagtagacc ctgtatggac actgcttgac tgagtggtct tagggggaag
     3721 tcttccttgg taacaggatg atgtgttgaa gggccagggc ttcattttga ttagcaagat
     3781 gaatttgatg ctcataagtt ggtctgtcac taaaaacaag gttttagttg aggtggccgt
     3841 ttatgacctt tgaatgtcac ctttcctgat ggaatagggt ggcttttcct gtgggcagta
     3901 aggcagcacc tcatgaactg gctcccacat cacaagtcac atccactgca gactgaccga
     3961 atgaggtcca caggcagagt gggtcatccc ctgacatctg cccatttggt gcctgtgtga
     4021 aatgctcttc tgatcctcct tcgcagaaga accacatcat aaaaaccact ttggctttgg
     4081 cgctaagcag catcctggct ggaaatctca gagctaaaga ggaaccaaag agcataaatt
     4141 atccctggag gaagtttttg tgggaaggac tgctgtggga tcgcagtggg gaggaaccca
     4201 cacttgttga accactgtgc cctggctaag gccagatttc ctgggttcct tgtcagcctc
     4261 tccctgagat catagactca gaaacctttt ctggccagtg cagccaggtt tatgttgttc
     4321 caagataact gagtgcgcaa gcctttggct ttacagcacc tcagacttgt atatccatgg
     4381 aagcaaaaag acccatttaa tccatgaatg ccctctttcc cgtagcgatg tccagtgagc
     4441 atgacaagtt tgcatctagg gcaaaatgtt actattattt accctgtgca tatcaactaa
     4501 aacaagggaa ataattgaaa caaaatccct atgtgtgcga gattttggct gagcgactag
     4561 actcagtaga aagcaaagcc ctgttttctg actgcaccat ctagatgagg aggccatgta
     4621 tcctgcctct tgttttacac acactgcaca aatacaatgg tcgcaatgct ttatttcagt
     4681 ataaaaaggg aagcattgtc atttgagtgt agatgccgtc cttccaggac acactgcaga
     4741 cctgccctta tggaccctgt agggtctcct agacagttct cagagtcagt tctcaatagc
     4801 attcatgtta ttcccaagtt aacacttcaa gtaatataaa ataaacacac acagtcttga
     4861 ctaatggctt gttttatgcc agcttgtgat acaagctaag ttcgtttgga agagggaaca
     4921 ttggctgaga gagcgccccc acgagaccag actgtgggca agcctgtggt acattgtctt
     4981 gattcacagt tgatgtggga ggtcacagct cactgtgtac atgtcacccc tgggctggtg
     5041 gccctggatg ctatgagtaa gcaggctgag taagtcataa ataggaaacc agtaagcagc
     5101 actcttccat gactctgctt caattcctgc ctctggattc atggcttgta ctccttgcac
     5161 aatggatctg agaattgtaa gactgaataa accctttcct ccccaat
//
