LOCUS       NM_001004091            2640 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus interleukin 17 receptor E (Il17re), mRNA.
ACCESSION   NM_001004091 XM_342738
VERSION     NM_001004091.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078742.1.
            
            On Sep 6, 2004 this sequence version replaced XM_342738.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078742.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132265, SAMD00132291
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2640
                     /gene="Il17re"
                     /note="interleukin 17 receptor E"
                     /db_xref="GeneID:362417"
                     /db_xref="RGD:735148"
     exon            1..206
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..1988
                     /gene="Il17re"
                     /note="IL-17RE; IL-17 receptor E"
                     /codon_start=1
                     /product="interleukin-17 receptor E precursor"
                     /protein_id="NP_001004091.1"
                     /db_xref="GeneID:362417"
                     /db_xref="RGD:735148"
                     /translation="MGSPRLAALLLSQPLLFICLAVSAQVACPCLPRWTSHCLLAFRV
                     DKHFAGLQCGWFPLLVRKSKSSHEFEVCWRHWTPSPFQRKLLGSPSLSQESHRISTHF
                     LAISHRGLRTKRTQPSAAEGIEHLPGAGSQKHGGPEFSFDLLPEVQAIRVTIPPGPEA
                     NVRLCYQWALECEDMSSPFDTQKIVSGGHTVDLPYEFLLPCMCIEASYLQEDTVRHKK
                     CPFRSWPEAYGSDFWKSIRFTDYSQHSQMVMALTLRCPLKLEASLCWRQDPVTPCKIL
                     PNATAKESEGWYILENVDLHPQLCFKFSFENSSHVECPHQSGSLPSWTVSMDTQAQQL
                     ILHFSTRTYATFSAAWSNPGLGLDSSMTPVYSISQTQGSVPVTLNLIIPFLRQGSCIL
                     VWRSDVQFAWKHLLCPDVSHRHLGLLILALLGLTTLLGVVLVLFCRRLLPGPGRTRPV
                     LLLHAADSEAQRRLVGALAELLRTALGGGRDVIVDLWEGTHVARIGPLPWLWAARERV
                     AREQGTVLLLWSCAGPSTACSGDPQTASLRTLSCAAPRQLLLAYFSRLCAKGDIPGPL
                     RALPRYRLLRDLPRLLRALDARPATLATSWSHLGAKECLKSRLELCHLLELEAAKDDY
                     HGSTNSPCGFSCL"
     exon            207..222
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            223..320
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            321..480
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            481..620
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            621..689
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            690..756
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            757..932
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            933..980
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1026
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1181
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            1182..1250
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            1251..1302
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1401
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
     exon            1402..2613
                     /gene="Il17re"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgcttctc acagctccag ggccaggccc tacaggaaag ccatggtctc tgctccctga
       61 tcctccagaa gctcatgggg agccccagac tggcagcctt gctcctgtct caacctctac
      121 tgttcatctg ccttgctgtg tctgctcagg ttgcctgccc ctgcctgcca cgttggacca
      181 gccactgtct actggccttc cgtgtggata agcattttgc tggccttcag tgtggctggt
      241 tccctctctt ggtgaggaaa tctaaaagtt ctcatgaatt tgaagtctgt tggaggcact
      301 ggacaccatc acccttccag aggaagctac taggtagccc ttccttgtct caggagagcc
      361 atcgaatttc cacccacttc ctagccatct cccacagagg cctacgtacc aaaaggaccc
      421 agccttcagc tgcagaaggg atagaacatc tccctggagc aggttcacaa aagcatggag
      481 gacctgaatt ctcctttgat ttgctgcctg aggtacaggc tattcgggtg actattcctc
      541 caggcccaga ggccaacgta cgcctttgtt accagtgggc actggaatgt gaggacatga
      601 gtagtccttt tgatacccag aaaattgtgt ctgggggcca cactgtagac ctgccttatg
      661 aattccttct gccttgcatg tgcatagagg cctcctacct gcaggaggac actgtgaggc
      721 acaaaaagtg tcccttccgg agctggcctg aagcttatgg ctccgacttc tggaagtcaa
      781 tacgcttcac tgactacagc cagcacagtc agatggtcat ggctctgaca ctccgctgcc
      841 cactgaaact ggaggcctct ctctgctgga ggcaggaccc agtcacgccc tgcaaaatcc
      901 ttcccaatgc cacagcaaag gagtcagaag gatggtatat cctggagaat gtggacttgc
      961 acccccagct ctgctttaag ttttcttttg aaaacagtag ccatgttgaa tgtccccacc
     1021 agagtggctc tctcccatcc tggactgtga gcatggatac ccaggcccaa cagctgattc
     1081 ttcacttttc gacgaggaca tatgctacct tcagtgctgc ctggagtaac ccaggtttgg
     1141 ggctggatag ctccatgact cctgtgtaca gcatcagtca gacccagggc tcagttccag
     1201 tgacactgaa cctcattatt cccttcttga ggcaggggag ctgcatcctg gtgtggaggt
     1261 cagatgtcca gtttgcctgg aagcacctct tgtgtcctga tgtctcccat agacacctcg
     1321 ggctcttgat cctggcactg ctgggtctca ccactctact gggtgtagtt ctggtcctct
     1381 tctgccggcg cctactgcca ggccccggtc gaacaaggcc agttttactc ctacacgcag
     1441 cggactcaga ggcacagcga cgcctggtgg gagctttggc cgaactgctg cggaccgcgc
     1501 tgggtggtgg acgcgacgtg atcgtggatc tctgggaagg gacgcacgtg gctcgcattg
     1561 gaccactgcc atggctctgg gcagcacggg aacgcgtggc acgggagcag ggcactgtgt
     1621 tgctcctttg gagctgtgcg ggccccagca ctgcctgcag cggcgacccg cagactgcat
     1681 cccttcgcac cttgtcgtgc gctgctccac gccagctgct gctcgcctac ttcagtcgcc
     1741 tctgtgccaa aggtgacatt cccgggccgc tgcgcgctct accgcgctac cgcctgcttc
     1801 gtgatctgcc acgcctactg agagcgctgg atgctcgacc tgccacccta gccactagct
     1861 ggagtcacct tggagctaag gagtgtttga aaagtcgcct ggagctgtgt cacctgctgg
     1921 aactcgaggc tgccaaagac gactaccacg gttcaaccaa tagtccttgt ggcttcagtt
     1981 gtctgtagct acagcctgtg tagcaacagc agtaactcca gaacgaggcc gcaaacatgt
     2041 actctttggg ggtgcttctt gtccccccaa accgtgagac tcatcctagg acccacactt
     2101 gaccagcctc cctctcacat ttgctccttc tcagagtccc tgagagaaag ttgggctttc
     2161 ctgataggtc ctcggcccat tctgaggagg aggggagatt ttcccaattc ttctcacaac
     2221 tgcaaaaaga caaccgattg cttggtgtac tctagtcccg gctggagagc tagaccaggg
     2281 ttggaaagca gggcctacgt gtcaagctcg tgaagagtgt tctgcttggc agagttgaga
     2341 gaacccccag cccccaccct gtaagccagg ggtccctcgc catttcctgg agaaaggccc
     2401 aacccagaag tagtttgatt tgtttgtttg tttgtttgtt tgtttgagac tgaatctcac
     2461 tgtgtagccc ttgatggcct ggaacaaaga gatctatcta cctgcctctg cctcctgagt
     2521 gctgggattc gaggcctact tcaccacaat tggtgagagg ggtttgtgtc gtccagaaag
     2581 atgaataaaa gcaagcatag gagacacgtt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
