LOCUS       XM_039085515            2246 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interleukin 11 (Il11), transcript
            variant X1, mRNA.
ACCESSION   XM_039085515
VERSION     XM_039085515.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085515.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2246
                     /gene="Il11"
                     /gene_synonym="Il-11"
                     /note="interleukin 11; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 ESTs, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:171040"
                     /db_xref="RGD:621475"
     CDS             863..1285
                     /gene="Il11"
                     /gene_synonym="Il-11"
                     /codon_start=1
                     /product="interleukin-11 isoform X1"
                     /protein_id="XP_038941443.1"
                     /db_xref="GeneID:171040"
                     /db_xref="RGD:621475"
                     /translation="MRDKFPADGDHNLDSLPTLAMSAGTLGSLQLPGVLTRLRVDLMS
                     YFRHVQWLRRAAGPSLKTLEPELGALQARLERLLRRLQLLMSRLALPQAAPDQPAVPL
                     GPPASAWGSIRAAHAILGGLHLTLDWAVRGLLLLKTRL"
ORIGIN      
        1 ggtggggagg atgggaaaca gagtagggac agagggctag aagagaggag tcatggggag
       61 tcagactgag aaagaatagt gagaaaagtg ggagtttgag agaagagaaa gagagagaga
      121 gagagagaga gagagagaga gagagagaga gagagagaga gagagcgcgc aagaggcaag
      181 agacagccag acactgacag agggctaggt gttcggaggt gatccttaag ggccccgggt
      241 atcccaggga gtcagtggga atctaggaac agagacgacc acgaactccc aacagcgtgg
      301 cttagggagg gaaactaagg cacagaatcc cagatgatga cagcaagccc cagaggaccg
      361 ggaccaggca ggcgaggcaa atgaaagagg tgcggacaga gagtttaaag aaccagacag
      421 atgcgcaccg gctaggggac gggtgcaccg acagacggcc gaggaggggc ttgcgaagaa
      481 ctaggcacag ctagagggga ccagggggcg ggctgggggt gtgatacgtg agcttggcgg
      541 cccggggggc tctgattggc tggctgtccc agaggtgggc ggggcagctg ggggatgggc
      601 agccggcaaa ggagctgtcc ttagcccctg agccccgaac gctgcccgct gggtctccag
      661 ctgcgtgcgt ccctgagcgc ctctccgacc aggtgtttgt cacctggtcc tggtggtgct
      721 gagcctctgg ccagatagag tcgttgcccc tgggccacca gctggctccc ctcgagtgtc
      781 ttcagaccct cgtgcagatc tggatagcgc tgtcctcttg accaggtccc tcctggcaga
      841 cacacggcaa ctagctgcac agatgagaga caaattccca gctgatggag accacaatct
      901 ggactcccta cctaccttgg ccatgagcgc tgggacactg ggatctttgc agcttcctgg
      961 agtgctgaca aggcttcgag tagacttaat gtcctacttc cgacatgtac agtggttgcg
     1021 ccgggcagct ggtccttccc taaagactct ggagccagag ctgggtgccc tgcaagcccg
     1081 actggaacgg ctacttcgtc gcttacagct cttgatgtct cgcctagcct tgccccaggc
     1141 agccccggac caacctgcgg tccctctggg ccctcctgcc tcggcctggg gaagcatccg
     1201 ggcagctcat gccatcctag gagggctgca cctgaccttg gactgggccg tgcggggcct
     1261 gctgttgtta aagactcggc tgtaactcag gactgaaagc caccatcgac atcgtccttt
     1321 aaagccagat cttatttatt tatttatttt ggtacttgga gcgggggagc atgatgaaca
     1381 ggggcatgcc acaccccaaa cagccacacc cagctagata aagtccttcc aggagacctg
     1441 ggtgaggggg ctcacctgtg gcttatttat acttatttat ttaaagaatt ggggtgggtg
     1501 catctgagac cctgaggagc agggaactga gatcctgggt cctgggtctt tacgaagtct
     1561 attcacagtg tcttcctcac ttttttatta tttattaaac aattactttt tatattagga
     1621 ggatggaggg ggggaaagga agcctggggt ttttatacca aaatgtgatt ttttttttgt
     1681 gacacagaga agtggggtat ttaactatta atgtggggta tataactatt tagaggttat
     1741 tagcaggaat attccaaagg gatctgagtg taaaccggta ccctagcact tcaaaggtcc
     1801 tcaacagata cttagcaaac ggaccgaaac acctcatgtc taacagcacc tgcatggtac
     1861 agagatagca aggttcaagg tgtttcagca agagtcacgc accctggcaa atgggaaaca
     1921 acttaggttt tcgggggggg ggggggggca ggggacggat gaatctagtt agggaagttc
     1981 caggcaaaga cttctttaga tgttgaacgt ccctgtgccc cgagagcagc agaggataga
     2041 acctctcttt ctatacatgg atatagattt tttttgtttt tcaaaatgga aacaccaaaa
     2101 tgttgacaac agctgcctca gggttgaaaa caagagatgg cactgtgggt gactgttatt
     2161 gtttgtgctt gcattttcca gagtttccac catgactgta ttttgcatga cacgtttaca
     2221 aacaataata aacactattt ttagaa
//
